RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 BRCA2P51587 3418 aa18.85■□□□□ 0.61
RPAIN-208ENST00000571043 ZNF263O14978 683 aa18.85■□□□□ 0.61
RPAIN-208ENST00000571043 P4HA2O15460 535 aa18.85■□□□□ 0.61
RPAIN-208ENST00000571043 MSCO60682 206 aa18.85■□□□□ 0.61
RPAIN-208ENST00000571043 ABL1P00519 1130 aa18.85■□□□□ 0.61
RPAIN-208ENST00000571043 ACTN1P12814 892 aa18.85■□□□□ 0.61
RPAIN-208ENST00000571043 HOXD8P13378 290 aaPredicted RBP18.85■□□□□ 0.61
RPAIN-208ENST00000571043 TCF7P36402 384 aaPredicted RBP18.85■□□□□ 0.61
RPAIN-208ENST00000571043 NCBP1Q09161 790 aaKnown RBP18.85■□□□□ 0.61
RPAIN-208ENST00000571043 KIF5AQ12840 1032 aa18.85■□□□□ 0.61
RPAIN-208ENST00000571043 RAPGEF1Q13905 1077 aa18.85■□□□□ 0.61
RPAIN-208ENST00000571043 ASIC2Q16515 512 aa18.85■□□□□ 0.61
RPAIN-208ENST00000571043 BSNDQ8WZ55 320 aa18.85■□□□□ 0.61
RPAIN-208ENST00000571043 IFT74Q96LB3 600 aa18.85■□□□□ 0.61
RPAIN-208ENST00000571043 NAPGQ99747 312 aaPredicted RBP18.85■□□□□ 0.61
RPAIN-208ENST00000571043 CBWD1Q9BRT8 395 aa18.85■□□□□ 0.61
RPAIN-208ENST00000571043 UPF3AQ9H1J1 476 aaKnown RBP18.85■□□□□ 0.61
RPAIN-208ENST00000571043 NRBP2Q9NSY0 501 aa18.85■□□□□ 0.61
RPAIN-208ENST00000571043 HSPBP1Q9NZL4 362 aa18.85■□□□□ 0.61
RPAIN-208ENST00000571043 PPME1Q9Y570 386 aa18.85■□□□□ 0.61
RPAIN-208ENST00000571043 PCDHA13Q9Y5I0 950 aa18.85■□□□□ 0.61
RPAIN-208ENST00000571043 BZW2Q9Y6E2 419 aaKnown RBP18.85■□□□□ 0.61
RPAIN-208ENST00000571043 DENND3A2RUS2 1198 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 N4BP1O75113 896 aaKnown RBP18.84■□□□□ 0.61
RPAIN-208ENST00000571043 LGR5O75473 907 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 CYP27A1Q02318 531 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 APBA1Q02410 837 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 TDRD12Q587J7 1177 aaKnown RBP18.84■□□□□ 0.61
RPAIN-208ENST00000571043 LHX8Q68G74 356 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 SPAG5Q96R06 1193 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 PCYT2Q99447 389 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 IFIH1Q9BYX4 1025 aaKnown RBP18.84■□□□□ 0.61
RPAIN-208ENST00000571043 MMP3P08254 477 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 ANXA13P27216 316 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 RFC5P40937 340 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 CPT1AP50416 773 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 POLGP54098 1239 aaPredicted RBP18.84■□□□□ 0.61
RPAIN-208ENST00000571043 EMC2Q15006 297 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 MTERF2Q49AM1 385 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 ZNF710Q8N1W2 664 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 MNS1Q8NEH6 495 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 LACRTQ9GZZ8 138 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 POLR3FQ9H1D9 316 aaPredicted RBP18.84■□□□□ 0.61
RPAIN-208ENST00000571043 PCIF1Q9H4Z3 704 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 DHX33Q9H6R0 707 aaKnown RBP18.84■□□□□ 0.61
RPAIN-208ENST00000571043 LUC7LQ9NQ29 371 aaKnown RBP18.84■□□□□ 0.61
RPAIN-208ENST00000571043 TRIM10Q9UDY6 481 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 FHOD1Q9Y613 1164 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 KAT6AQ92794 2004 aa18.84■□□□□ 0.61
RPAIN-208ENST00000571043 RCCD1A6NED2 376 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 PMM2O15305 246 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 PJA2O43164 708 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 ADAMTS4O75173 837 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 PRKCIP41743 596 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 MAGEA1P43355 309 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 STAT5BP51692 787 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 VAMP7P51809 220 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 JAM2P57087 298 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 IRX5P78411 483 aaPredicted RBP18.83■□□□□ 0.6
RPAIN-208ENST00000571043 ENPEPQ07075 957 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 KLHL30Q0D2K2 578 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 DGKDQ16760 1214 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 BRDTQ58F21 947 aaPredicted RBP18.83■□□□□ 0.6
RPAIN-208ENST00000571043 PLPPR4Q7Z2D5 763 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 MTERF4Q7Z6M4 381 aaKnown RBP18.83■□□□□ 0.6
RPAIN-208ENST00000571043 FMNL3Q8IVF7 1028 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 ARMC5Q96C12 935 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 FAM167AQ96KS9 214 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 CEP89Q96ST8 783 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.83■□□□□ 0.6
RPAIN-208ENST00000571043 UNC93B1Q9H1C4 597 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 SPC25Q9HBM1 224 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 PAK6Q9NQU5 681 aaPredicted RBP18.83■□□□□ 0.6
RPAIN-208ENST00000571043 ARHGAP28Q9P2N2 729 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 CDC23Q9UJX2 597 aa18.83■□□□□ 0.6
RPAIN-208ENST00000571043 KIAA0100Q14667 2235 aaKnown RBP18.82■□□□□ 0.6
RPAIN-208ENST00000571043 TISP43B9A030 160 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 TRIM49P0CI25 452 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 TRIM49CP0CI26 452 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 RFX1P22670 979 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 MYL7Q01449 175 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 CETN1Q12798 172 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 MTFR1Q15390 333 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 TARBP2Q15633 366 aaKnown RBP18.82■□□□□ 0.6
RPAIN-208ENST00000571043 FSCN1Q16658 493 aaKnown RBP18.82■□□□□ 0.6
RPAIN-208ENST00000571043 CBWD6Q4V339 395 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 CBWD3Q5JTY5 395 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 CBWD5Q5RIA9 395 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 IRF2BP2Q7Z5L9 587 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 KLHDC9Q8NEP7 349 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 ZNF333Q96JL9 665 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 C16orf70Q9BSU1 422 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 KIFC3Q9BVG8 833 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 CARD6Q9BX69 1037 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 SMARCAD1Q9H4L7 1026 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 AZI2Q9H6S1 392 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 XPNPEP3Q9NQH7 507 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 EMSYQ7Z589 1322 aa18.82■□□□□ 0.6
RPAIN-208ENST00000571043 FRMPD3Q5JV73 1810 aa18.81■□□□□ 0.6
RPAIN-208ENST00000571043 EFCAB8A8MWE9 144 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms