RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 EFCAB12Q6NXP0 572 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 BLOC1S2Q6QNY1 142 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 CAPN12Q6ZSI9 719 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 Q6ZUG5 572 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 SUGP1Q8IWZ8 645 aaKnown RBP7.32□□□□□ -1.24
SMG6-204ENST00000570606 LRRC71Q8N4P6 559 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 CRYGNQ8WXF5 182 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 EDAQ92838 391 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 PHKBQ93100 1093 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 COL26A1Q96A83 441 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 ZNF668Q96K58 619 aaPredicted RBP7.32□□□□□ -1.24
SMG6-204ENST00000570606 ZNF558Q96NG5 402 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 TCF25Q9BQ70 676 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 MKNK1Q9BUB5 465 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 SLC26A6Q9BXS9 759 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 TMEM117Q9H0C3 514 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 TSPAN10Q9H1Z9 355 aaPredicted RBP7.32□□□□□ -1.24
SMG6-204ENST00000570606 ELAC1Q9H777 363 aaKnown RBP7.32□□□□□ -1.24
SMG6-204ENST00000570606 RAB6BQ9NRW1 208 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 TYW1Q9NV66 732 aaKnown RBP7.32□□□□□ -1.24
SMG6-204ENST00000570606 VPS54Q9P1Q0 977 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 EGFL7Q9UHF1 273 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 PUF60Q9UHX1 559 aaKnown RBP7.32□□□□□ -1.24
SMG6-204ENST00000570606 LZTS1Q9Y250 596 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 HRH3Q9Y5N1 445 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 WASF2Q9Y6W5 498 aa7.32□□□□□ -1.24
SMG6-204ENST00000570606 LOC730098B7Z3J9 87 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 FSCN2O14926 492 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 PRPF3O43395 683 aaKnown RBP7.31□□□□□ -1.24
SMG6-204ENST00000570606 IL2RAP01589 272 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 ATF7P17544 494 aaPredicted RBP7.31□□□□□ -1.24
SMG6-204ENST00000570606 SP100P23497 879 aaPredicted RBP7.31□□□□□ -1.24
SMG6-204ENST00000570606 PBX3P40426 434 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 GPC3P51654 580 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 ERVFC1P60507 584 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 ZXDAP98168 799 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 KRT17Q04695 432 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 CBLBQ13191 982 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 DSC3Q14574 896 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 PKN1Q16512 942 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 LRCH2Q5VUJ6 765 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 KCNT2Q6UVM3 1135 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 TRIM67Q6ZTA4 783 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 Q6ZVU0 165 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 TMC7Q7Z402 723 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 ECHDC2Q86YB7 292 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 VN1R2Q8NFZ6 395 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 SCG3Q8WXD2 468 aaKnown RBP7.31□□□□□ -1.24
SMG6-204ENST00000570606 MRPS27Q92552 414 aaKnown RBP7.31□□□□□ -1.24
SMG6-204ENST00000570606 ITPKCQ96DU7 683 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 CCDC136Q96JN2 1154 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 APOL5Q9BWW9 433 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 TEKT3Q9BXF9 490 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 RNF26Q9BY78 433 aaPredicted RBP7.31□□□□□ -1.24
SMG6-204ENST00000570606 CWH43Q9H720 699 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 DISC1Q9NRI5 854 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 NRBP2Q9NSY0 501 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 SCHIP1Q9P0W5 487 aaPredicted RBP7.31□□□□□ -1.24
SMG6-204ENST00000570606 SEPT3Q9UH03 358 aa7.31□□□□□ -1.24
SMG6-204ENST00000570606 ARID2Q68CP9 1835 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 A6NJY4 79 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 HIDE1A8MVS5 230 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 J3QL48 77 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 ADAMTS3O15072 1205 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 MSH4O15457 936 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 ZNF862O60290 1169 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 DARSP14868 501 aaKnown RBP7.3□□□□□ -1.24
SMG6-204ENST00000570606 FGFR4P22455 802 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 SFPQP23246 707 aaKnown RBP eCLIP7.3□□□□□ -1.24
SMG6-204ENST00000570606 RPS6KB1P23443 525 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 EIF4BP23588 611 aaKnown RBP7.3□□□□□ -1.24
SMG6-204ENST00000570606 PSMA5P28066 241 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 SFNP31947 248 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 CIITAP33076 1130 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 SMTNP53814 917 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 NLRP5P59047 1200 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 CCT2P78371 535 aaKnown RBP7.3□□□□□ -1.24
SMG6-204ENST00000570606 PLCB3Q01970 1234 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 SIGLEC14Q08ET2 396 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 SMC1AQ14683 1233 aaKnown RBP7.3□□□□□ -1.24
SMG6-204ENST00000570606 BMS1Q14692 1282 aaKnown RBP7.3□□□□□ -1.24
SMG6-204ENST00000570606 CBX2Q14781 532 aaPredicted RBP7.3□□□□□ -1.24
SMG6-204ENST00000570606 UGCGQ16739 394 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 MTERF2Q49AM1 385 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 CLLU1OSQ5K130 101 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 FOXD4L5Q5VV16 416 aaPredicted RBP7.3□□□□□ -1.24
SMG6-204ENST00000570606 ANKRD54Q6NXT1 300 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 MIER3Q7Z3K6 550 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 TRIM22Q8IYM9 498 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 LINC01465Q8N7H1 131 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 TMEM87AQ8NBN3 555 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 HELQQ8TDG4 1101 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 FOXD4L4Q8WXT5 416 aaPredicted RBP7.3□□□□□ -1.24
SMG6-204ENST00000570606 SUSD6Q92537 303 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 CASP10Q92851 521 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 LENG9Q96B70 501 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 CASD1Q96PB1 797 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 MRPL9Q9BYD2 267 aaKnown RBP7.3□□□□□ -1.24
SMG6-204ENST00000570606 C22orf23Q9BZE7 217 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 ADAMTS10Q9H324 1103 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms