RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 PRKCEQ02156 737 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 MTAPQ13126 283 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 UGCGQ16739 394 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 LAIR1Q6GTX8 287 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 PPP1R18Q6NYC8 613 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 CASC1Q6TDU7 716 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 CATSPER4Q7RTX7 472 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 GRASPQ7Z6J2 395 aaPredicted RBP11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 MRPL10Q7Z7H8 261 aaKnown RBP11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 GLYCTKQ8IVS8 523 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 TEX2Q8IWB9 1127 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 SMC5Q8IY18 1101 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 COLGALT2Q8IYK4 626 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 TMTC2Q8N394 836 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 FANCBQ8NB91 859 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 B3GALT6Q96L58 329 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 CEP89Q96ST8 783 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 NELL2Q99435 816 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 MTA3Q9BTC8 594 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 RSAD1Q9HA92 442 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 CHST7Q9NS84 486 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 TCEAL9Q9UHQ7 104 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 CNTNAP5Q8WYK1 1306 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 F5P12259 2224 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 ZZEF1O43149 2961 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 SHISA7A6NL88 538 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 ADAMTS3O15072 1205 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 NCAM2O15394 837 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 LRP3O75074 770 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 ZMYND10O75800 440 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 RETP07949 1114 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 KCNA4P22459 653 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 OR1G1P47890 313 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 ACAP1Q15027 740 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 N4BP2L1Q5TBK1 243 aaPredicted RBP11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 JAKMIP3Q5VZ66 844 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 PRR23CQ6ZRP0 262 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 TPRG1Q6ZUI0 275 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 MTSS1LQ765P7 747 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 ZNF410Q86VK4 478 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 KSR1Q8IVT5 923 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 CELF5Q8N6W0 485 aaKnown RBP11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 FGF13Q92913 245 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 KXD1Q9BQD3 176 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 INO80BQ9C086 356 aaPredicted RBP11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 SEMA4GQ9NTN9 838 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 FAM217BQ9NTX9 383 aaPredicted RBP11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 AGPAT5Q9NUQ2 364 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 RAB23Q9ULC3 237 aa11.75□□□□□ -0.53
CTDNEP1-202ENST00000570380 PDCD11Q14690 1871 aaKnown RBP11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 TICRRQ7Z2Z1 1910 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 SPAG17Q6Q759 2223 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 ZFYVE26Q68DK2 2539 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 IGKV6-21A0A0C4DH24 114 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 TMEM150BA6NC51 233 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 WDR64B1ANS9 1081 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 RPL17P18621 184 aaKnown RBP11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 LIFRP42702 1097 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 SHC2P98077 582 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 SETQ01105 290 aaPredicted RBP11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 NUCB1Q02818 461 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 CSRP2Q16527 193 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 MTERF2Q49AM1 385 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 UBXN11Q5T124 520 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 RHPN2Q8IUC4 686 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 ITFG1Q8TB96 612 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 TMEM87BQ96K49 555 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 MBOAT7Q96N66 472 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 PHF20Q9BVI0 1012 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 IFT122Q9HBG6 1241 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 DISC1Q9NRI5 854 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 FNIP2Q9P278 1114 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 SUCLA2Q9P2R7 463 aaPredicted RBP11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 SLC12A7Q9Y666 1083 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 CEP295Q9C0D2 2601 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 CNTNAP2Q9UHC6 1331 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 COL4A2P08572 1712 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 VWA8A3KMH1 1905 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 SDK1Q7Z5N4 2213 aa11.74□□□□□ -0.53
CTDNEP1-202ENST00000570380 STBD1O95210 358 aa11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 PROS1P07225 676 aa11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 HOXA11P31270 313 aaPredicted RBP11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 MCM5P33992 734 aa11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 DNM2P50570 870 aa11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 NRLP54845 237 aa11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 DSC1Q08554 894 aa11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 ADCY1Q08828 1119 aa11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 FUT2Q10981 343 aa11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 PRR16Q569H4 304 aa11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 PRR23BQ6ZRT6 265 aa11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 PKD1L2Q7Z442 2459 aa11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 MICU3Q86XE3 530 aa11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 ZNF687Q8N1G0 1237 aa11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 DDX1Q92499 740 aaKnown RBP11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 LENG9Q96B70 501 aa11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 SH2D3AQ9BRG2 576 aa11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 NIFKQ9BYG3 293 aaKnown RBP11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 GPR62Q9BZJ7 368 aa11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 HEBP1Q9NRV9 189 aa11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms