RNA–Protein interactions for RNA: ENST00000570231.1

THUMPD1-205, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 1,040 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-205ENST00000570231 SUPT20HL2P0C7V6 817 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 ZNF865P0CJ78 1059 aaPredicted RBP7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 XRCC5P13010 732 aaKnown RBP7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 MARK3P27448 753 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 SFNP31947 248 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 CHMP4BP1P59074 171 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 ARHGAP1Q07960 439 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 ARHGEF6Q15052 776 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 EPHA7Q15375 998 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 HSDL1Q3SXM5 330 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 TMEM119Q4V9L6 283 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 CELF3Q5SZQ8 465 aaKnown RBP7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 PLA2G4FQ68DD2 849 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 GDF6Q6KF10 455 aaPredicted RBP7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 ZNF746Q6NUN9 644 aaPredicted RBP7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 SWSAP1Q6NVH7 229 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 MIS18BP1Q6P0N0 1132 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 METTL7BQ6UX53 244 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 B3GNT9Q6UX72 402 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 CCDC60Q8IWA6 550 aaPredicted RBP7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 MSL3Q8N5Y2 521 aaKnown RBP7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 IQUBQ8NA54 791 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 GIMAP8Q8ND71 665 aaPredicted RBP7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 TRPV1Q8NER1 839 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 PIGOQ8TEQ8 1089 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 AFG1LQ8WV93 481 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 SPACA7Q96KW9 195 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 NSUN5Q96P11 429 aaKnown RBP7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 SENP7Q9BQF6 1050 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 SH2D3AQ9BRG2 576 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 SSBP4Q9BWG4 385 aaPredicted RBP7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 MRPL18Q9H0U6 180 aaKnown RBP7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 BLZF1Q9H2G9 400 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 TUFT1Q9NNX1 390 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 WRAP73Q9P2S5 460 aaPredicted RBP7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 GABBR1Q9UBS5 961 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 FAM184BQ9ULE4 1060 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 PCDHA10Q9Y5I2 948 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 ZNF236Q9UL36 1845 aa7.73□□□□□ -1.17
THUMPD1-205ENST00000570231 MYH15Q9Y2K3 1946 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 GSTTP1A0A1W2PQM5 241 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 RBM47A0AV96 593 aaKnown RBP7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 SYCE3A1L190 88 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 BIN1O00499 593 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 ZBTB39O15060 712 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 DYNC1LI2O43237 492 aaPredicted RBP7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 HMGCRP04035 888 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 P4HBP07237 508 aaKnown RBP7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 SLFN14P0C7P3 912 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 PLA2G4BP0C869 781 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 HSPA1AP0DMV8 641 aaKnown RBP7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 HSPA1BP0DMV9 641 aaKnown RBP7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 TGFB3P10600 412 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 HSPA8P11142 646 aaKnown RBP7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 CYBAP13498 195 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 RPA1P27694 616 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 NOS3P29474 1203 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 CCND3P30281 292 aaPredicted RBP7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 TCF7P36402 384 aaPredicted RBP7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 QARSP47897 775 aaKnown RBP7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 PSMC6P62333 389 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 PRKCEQ02156 737 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 CACNB2Q08289 660 aaPredicted RBP7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 PNOCQ13519 176 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 POSTNQ15063 836 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 ZSCAN23Q3MJ62 389 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 NAALADL2Q58DX5 795 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 ISM2Q6H9L7 571 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 TLK2Q86UE8 772 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 GPBP1Q86WP2 473 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 SMAP1Q8IYB5 467 aaPredicted RBP7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 IL22RA1Q8N6P7 574 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 NEK9Q8TD19 979 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 SH3TC2Q8TF17 1288 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 SEPT1Q8WYJ6 367 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 LARP4BQ92615 738 aaKnown RBP7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 RAD54LQ92698 747 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 GLG1Q92896 1179 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 ATP6V0A1Q93050 837 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 PAGE5Q96GU1 130 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 CCDC43Q96MW1 224 aaKnown RBP7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 GPR20Q99678 358 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 PYM1Q9BRP8 204 aaKnown RBP7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 POLR3CQ9BUI4 534 aaPredicted RBP7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 NT5C3AQ9H0P0 336 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 ZNF302Q9NR11 478 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 BLOC1S4Q9NUP1 217 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 LRRC37A2A6NM11 1700 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 LCTP09848 1927 aa7.72□□□□□ -1.17
THUMPD1-205ENST00000570231 NPHP3-ACAD11A0A0J9YXS1 232 aa7.71□□□□□ -1.18
THUMPD1-205ENST00000570231 ARHGEF35A5YM69 484 aa7.71□□□□□ -1.18
THUMPD1-205ENST00000570231 DLL1O00548 723 aa7.71□□□□□ -1.18
THUMPD1-205ENST00000570231 ZNF862O60290 1169 aa7.71□□□□□ -1.18
THUMPD1-205ENST00000570231 USO1O60763 962 aaKnown RBP7.71□□□□□ -1.18
THUMPD1-205ENST00000570231 SLITRK3O94933 977 aa7.71□□□□□ -1.18
THUMPD1-205ENST00000570231 ATG7O95352 703 aa7.71□□□□□ -1.18
THUMPD1-205ENST00000570231 KRT18P05783 430 aaKnown RBP7.71□□□□□ -1.18
THUMPD1-205ENST00000570231 MYL3P08590 195 aa7.71□□□□□ -1.18
THUMPD1-205ENST00000570231 ZNF286BP0CG31 522 aa7.71□□□□□ -1.18
THUMPD1-205ENST00000570231 AKR1A1P14550 325 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms