RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 NT5C1B-RDH14C9J2C7 533 aa14.38□□□□□ -0.11
CNOT1-220ENST00000569916 ACKR2O00590 384 aa14.38□□□□□ -0.11
CNOT1-220ENST00000569916 DDHD2O94830 711 aa14.38□□□□□ -0.11
CNOT1-220ENST00000569916 SSBP05455 408 aaKnown RBP eCLIP14.38□□□□□ -0.11
CNOT1-220ENST00000569916 PLA2G4BP0C869 781 aa14.38□□□□□ -0.11
CNOT1-220ENST00000569916 MLH1P40692 756 aa14.38□□□□□ -0.11
CNOT1-220ENST00000569916 UBA7P41226 1012 aa14.38□□□□□ -0.11
CNOT1-220ENST00000569916 NPTX2P47972 431 aa14.38□□□□□ -0.11
CNOT1-220ENST00000569916 PEX3P56589 373 aa14.38□□□□□ -0.11
CNOT1-220ENST00000569916 RNASELQ05823 741 aaKnown RBP14.38□□□□□ -0.11
CNOT1-220ENST00000569916 PRPF4BQ13523 1007 aaKnown RBP14.38□□□□□ -0.11
CNOT1-220ENST00000569916 ZNF280BQ86YH2 543 aa14.38□□□□□ -0.11
CNOT1-220ENST00000569916 ADAMTS19Q8TE59 1207 aa14.38□□□□□ -0.11
CNOT1-220ENST00000569916 CALML4Q96GE6 196 aa14.38□□□□□ -0.11
CNOT1-220ENST00000569916 USP28Q96RU2 1077 aa14.38□□□□□ -0.11
CNOT1-220ENST00000569916 TIPINQ9BVW5 301 aa14.38□□□□□ -0.11
CNOT1-220ENST00000569916 ZSCAN16Q9H4T2 348 aaPredicted RBP14.38□□□□□ -0.11
CNOT1-220ENST00000569916 UBN1Q9NPG3 1134 aa14.38□□□□□ -0.11
CNOT1-220ENST00000569916 CLDND1Q9NY35 253 aa14.38□□□□□ -0.11
CNOT1-220ENST00000569916 DNAJB4Q9UDY4 337 aa14.38□□□□□ -0.11
CNOT1-220ENST00000569916 USP20Q9Y2K6 914 aa14.38□□□□□ -0.11
CNOT1-220ENST00000569916 PHLPP2Q6ZVD8 1323 aa14.38□□□□□ -0.11
CNOT1-220ENST00000569916 ZMYM2Q9UBW7 1377 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 ARL5CA6NH57 179 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 N4BP3O15049 544 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 LINC01565O15544 149 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 NCK2O43639 380 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 GALTP07902 379 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 LIG1P18858 919 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 PLCG1P19174 1290 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 MARCKSP29966 332 aaPredicted RBP14.37□□□□□ -0.11
CNOT1-220ENST00000569916 LTBRP36941 435 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 SLC11A1P49279 550 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 ALDH7A1P49419 539 aaKnown RBP14.37□□□□□ -0.11
CNOT1-220ENST00000569916 EFNA5P52803 228 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 CEBPZQ03701 1054 aaKnown RBP14.37□□□□□ -0.11
CNOT1-220ENST00000569916 RAD51AP2Q09MP3 1159 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 DMP1Q13316 513 aaPredicted RBP14.37□□□□□ -0.11
CNOT1-220ENST00000569916 KARSQ15046 597 aaKnown RBP14.37□□□□□ -0.11
CNOT1-220ENST00000569916 LEXMQ3ZCV2 418 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 PLPP4Q5VZY2 271 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 EEF1DP3Q658K8 133 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.37□□□□□ -0.11
CNOT1-220ENST00000569916 BCL7CQ8WUZ0 217 aaPredicted RBP14.37□□□□□ -0.11
CNOT1-220ENST00000569916 PPP2R3CQ969Q6 453 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 GAD1Q99259 594 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 APOL6Q9BWW8 343 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 CCSER1Q9C0I3 900 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 GBP3Q9H0R5 595 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 C17orf75Q9HAS0 396 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 BLOC1S4Q9NUP1 217 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 KCND2Q9NZV8 630 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 ARHGAP28Q9P2N2 729 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 KANSL3Q9P2N6 904 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 GIT1Q9Y2X7 761 aa14.37□□□□□ -0.11
CNOT1-220ENST00000569916 SRPRBQ9Y5M8 271 aaKnown RBP14.37□□□□□ -0.11
CNOT1-220ENST00000569916 MORC2Q9Y6X9 1032 aaPredicted RBP14.37□□□□□ -0.11
CNOT1-220ENST00000569916 CARNS1A5YM72 827 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 CCDC169A6NNP5 214 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 SFI1A8K8P3 1242 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 H3BQ06 376 aaPredicted RBP14.36□□□□□ -0.11
CNOT1-220ENST00000569916 TBX10O75333 385 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 POMCP01189 267 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 AKAP5P24588 427 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 NRIP1P48552 1158 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 SCNN1GP51170 649 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 KRT17Q04695 432 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 DLX2Q07687 328 aaPredicted RBP14.36□□□□□ -0.11
CNOT1-220ENST00000569916 ADAM15Q13444 863 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 ARSHQ5FYA8 562 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 SPECC1Q5M775 1068 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 NT5DC1Q5TFE4 455 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 PDE12Q6L8Q7 609 aaKnown RBP14.36□□□□□ -0.11
CNOT1-220ENST00000569916 EP400NLQ6ZTU2 488 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 USP49Q70CQ1 688 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 TAS1R3Q7RTX0 852 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 RBM23Q86U06 439 aaKnown RBP14.36□□□□□ -0.11
CNOT1-220ENST00000569916 HACE1Q8IYU2 909 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 EFHBQ8N7U6 833 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 GSTCDQ8NEC7 633 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 MICAL1Q8TDZ2 1067 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 TMEM169Q96HH4 297 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 IGSF21Q96ID5 467 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 EPSTI1Q96J88 318 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 ZFP42Q96MM3 310 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 TCF25Q9BQ70 676 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 IGFLR1Q9H665 355 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 ENTPD7Q9NQZ7 604 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 MIOSQ9NXC5 875 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 PUF60Q9UHX1 559 aaKnown RBP14.36□□□□□ -0.11
CNOT1-220ENST00000569916 TRIP11Q15643 1979 aa14.36□□□□□ -0.11
CNOT1-220ENST00000569916 PDCD11Q14690 1871 aaKnown RBP14.35□□□□□ -0.11
CNOT1-220ENST00000569916 NPHP3-ACAD11A0A0J9YXS1 232 aa14.35□□□□□ -0.11
CNOT1-220ENST00000569916 K7ERI5 159 aa14.35□□□□□ -0.11
CNOT1-220ENST00000569916 GLP2RO95838 553 aa14.35□□□□□ -0.11
CNOT1-220ENST00000569916 HSP90AA1P07900 732 aaKnown RBP14.35□□□□□ -0.11
CNOT1-220ENST00000569916 PLS3P13797 630 aa14.35□□□□□ -0.11
CNOT1-220ENST00000569916 NASPP49321 788 aaPredicted RBP14.35□□□□□ -0.11
CNOT1-220ENST00000569916 CACNB1Q02641 598 aaPredicted RBP14.35□□□□□ -0.11
CNOT1-220ENST00000569916 DSC1Q08554 894 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms