RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 FOSBP53539 338 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 POLGP54098 1239 aaPredicted RBP12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 AK2P54819 239 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 NOMO2Q5JPE7 1267 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 CES5AQ6NT32 575 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 GPR149Q86SP6 731 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 RNF168Q8IYW5 571 aaPredicted RBP12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 TBCKQ8TEA7 893 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 TMEM169Q96HH4 297 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 TEKT3Q9BXF9 490 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 SLC26A6Q9BXS9 759 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 CHST12Q9NRB3 414 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 AGPAT5Q9NUQ2 364 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 DACT1Q9NYF0 836 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 NAP1L2Q9ULW6 460 aaPredicted RBP12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 SMC3Q9UQE7 1217 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 PIN4Q9Y237 131 aaKnown RBP12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 USTQ9Y2C2 406 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 INPP5FQ9Y2H2 1132 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 NARSO43776 548 aaKnown RBP12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 CNPP09543 421 aaKnown RBP12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 PDIA3P30101 505 aaKnown RBP12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 ALDH7A1P49419 539 aaKnown RBP12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 USP11P51784 963 aa12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 TOB2Q14106 344 aaPredicted RBP12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 XKR3Q5GH77 459 aa12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 MCTP2Q6DN12 878 aa12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 TWF2Q6IBS0 349 aaKnown RBP12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 FRMD5Q7Z6J6 570 aa12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 ZNF410Q86VK4 478 aa12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 ZNF454Q8N9F8 522 aa12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 RDM1Q8NG50 284 aa12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 CCDC12Q8WUD4 166 aaPredicted RBP12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 SCLT1Q96NL6 688 aa12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 KLHL5Q96PQ7 755 aa12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 GCOM2Q9BZD3 368 aaPredicted RBP12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 SFXN1Q9H9B4 322 aa12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 NRBP2Q9NSY0 501 aa12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 SUCLA2Q9P2R7 463 aaPredicted RBP12.5□□□□□ -0.41
CHRFAM7A-206ENST00000569278 CCDC196A0A1B0GTZ2 297 aa12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 TRAK2O60296 914 aa12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 PAPLNO95428 1278 aa12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 SFPQP23246 707 aaKnown RBP eCLIP12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 NPEPPSP55786 919 aa12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 CCT2P78371 535 aaKnown RBP12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 TAS1R1Q7RTX1 841 aa12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 MIER3Q7Z3K6 550 aa12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 MRPL10Q7Z7H8 261 aaKnown RBP12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 RHPN2Q8IUC4 686 aa12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 SMG8Q8ND04 991 aaKnown RBP12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 CCDC148Q8NFR7 591 aa12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 ZNF274Q96GC6 653 aaPredicted RBP12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 NLRP4Q96MN2 994 aa12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 TCEAL9Q9UHQ7 104 aa12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 DBR1Q9UK59 544 aaKnown RBP12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 DUSP12Q9UNI6 340 aa12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 PCDHB2Q9Y5E7 798 aa12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 PCDHGA10Q9Y5H3 936 aa12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 ZFHX4Q86UP3 3567 aa12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 DOCK6Q96HP0 2047 aa12.49□□□□□ -0.41
CHRFAM7A-206ENST00000569278 BAG4O95429 457 aaKnown RBP12.48□□□□□ -0.41
CHRFAM7A-206ENST00000569278 SSBP05455 408 aaKnown RBP eCLIP12.48□□□□□ -0.41
CHRFAM7A-206ENST00000569278 AOC1P19801 751 aa12.48□□□□□ -0.41
CHRFAM7A-206ENST00000569278 CA8P35219 290 aa12.48□□□□□ -0.41
CHRFAM7A-206ENST00000569278 MLLT3P42568 568 aaPredicted RBP12.48□□□□□ -0.41
CHRFAM7A-206ENST00000569278 CLCN5P51795 746 aa12.48□□□□□ -0.41
CHRFAM7A-206ENST00000569278 GLB1LQ6UWU2 654 aa12.48□□□□□ -0.41
CHRFAM7A-206ENST00000569278 DAGLBQ8NCG7 672 aa12.48□□□□□ -0.41
CHRFAM7A-206ENST00000569278 BICD2Q8TD16 824 aa12.48□□□□□ -0.41
CHRFAM7A-206ENST00000569278 ZNF707Q96C28 371 aaPredicted RBP12.48□□□□□ -0.41
CHRFAM7A-206ENST00000569278 GBP3Q9H0R5 595 aa12.48□□□□□ -0.41
CHRFAM7A-206ENST00000569278 DHX33Q9H6R0 707 aaKnown RBP12.48□□□□□ -0.41
CHRFAM7A-206ENST00000569278 KCNMB3Q9NPA1 279 aa12.48□□□□□ -0.41
CHRFAM7A-206ENST00000569278 SH3GLB2Q9NR46 395 aa12.48□□□□□ -0.41
CHRFAM7A-206ENST00000569278 CYP26B1Q9NR63 512 aa12.48□□□□□ -0.41
CHRFAM7A-206ENST00000569278 PCDHA4Q9UN74 947 aa12.48□□□□□ -0.41
CHRFAM7A-206ENST00000569278 FANCMQ8IYD8 2048 aa12.48□□□□□ -0.41
CHRFAM7A-206ENST00000569278 TDRD15B5MCY1 1934 aaKnown RBP12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 OTOGLQ3ZCN5 2332 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 KRBA1A5PL33 1030 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 INPPL1O15357 1258 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 DTNBO60941 627 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 NCLP19338 710 aaKnown RBP12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 RAB27AP51159 221 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 HMGN5P82970 282 aaKnown RBP12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 DSC1Q08554 894 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 SPIRE1Q08AE8 756 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 ATAT1Q5SQI0 421 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 MOXD1Q6UVY6 613 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 CCDC149Q6ZUS6 474 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 CATSPER4Q7RTX7 472 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 CABP7Q86V35 215 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 CCDC105Q8IYK2 499 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 RSAD2Q8WXG1 361 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 RSPH1Q8WYR4 309 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 HAS1Q92839 578 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 TMEM143Q96AN5 459 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 HERC2P3Q9BVR0 1158 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 IRF2BPLQ9H1B7 796 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 KCNK12Q9HB15 430 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms