RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 PROS1P07225 676 aa9.74□□□□□ -0.85
SMG1-216ENST00000569122 PMLP29590 882 aa9.74□□□□□ -0.85
SMG1-216ENST00000569122 HOXA9P31269 272 aa9.74□□□□□ -0.85
SMG1-216ENST00000569122 JAK3P52333 1124 aa9.74□□□□□ -0.85
SMG1-216ENST00000569122 ANTXR2P58335 489 aa9.74□□□□□ -0.85
SMG1-216ENST00000569122 PRKCEQ02156 737 aa9.74□□□□□ -0.85
SMG1-216ENST00000569122 PCBP1Q15365 356 aaKnown RBP eCLIP9.74□□□□□ -0.85
SMG1-216ENST00000569122 XKR3Q5GH77 459 aa9.74□□□□□ -0.85
SMG1-216ENST00000569122 WWC2Q6AWC2 1192 aa9.74□□□□□ -0.85
SMG1-216ENST00000569122 LILRA6Q6PI73 481 aa9.74□□□□□ -0.85
SMG1-216ENST00000569122 AGMOQ6ZNB7 445 aa9.74□□□□□ -0.85
SMG1-216ENST00000569122 PRR23CQ6ZRP0 262 aa9.74□□□□□ -0.85
SMG1-216ENST00000569122 HACE1Q8IYU2 909 aa9.74□□□□□ -0.85
SMG1-216ENST00000569122 CMTR1Q8N1G2 835 aaKnown RBP9.74□□□□□ -0.85
SMG1-216ENST00000569122 RDM1Q8NG50 284 aa9.74□□□□□ -0.85
SMG1-216ENST00000569122 PGBD1Q96JS3 809 aa9.74□□□□□ -0.85
SMG1-216ENST00000569122 FDXACB1Q9BRP7 624 aaPredicted RBP9.74□□□□□ -0.85
SMG1-216ENST00000569122 NIFKQ9BYG3 293 aaKnown RBP9.74□□□□□ -0.85
SMG1-216ENST00000569122 AGPAT5Q9NUQ2 364 aa9.74□□□□□ -0.85
SMG1-216ENST00000569122 BARHL2Q9NY43 387 aa9.74□□□□□ -0.85
SMG1-216ENST00000569122 SUCLA2Q9P2R7 463 aaPredicted RBP9.74□□□□□ -0.85
SMG1-216ENST00000569122 KCNH3Q9ULD8 1083 aa9.74□□□□□ -0.85
SMG1-216ENST00000569122 PRG3Q9Y2Y8 225 aaPredicted RBP9.74□□□□□ -0.85
SMG1-216ENST00000569122 MTF2Q9Y483 593 aaPredicted RBP9.74□□□□□ -0.85
SMG1-216ENST00000569122 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.74□□□□□ -0.85
SMG1-216ENST00000569122 BAHCC1Q9P281 2608 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 IGLV3-22A0A075B6J6 115 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 hCG_1642624A0A1W2PR95 340 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 POMCP01189 267 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 POU2F2P09086 479 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 SPATA31D3P0C874 917 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 ITGA4P13612 1032 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 TARSP26639 723 aaKnown RBP9.73□□□□□ -0.85
SMG1-216ENST00000569122 CLK2P49760 499 aaKnown RBP9.73□□□□□ -0.85
SMG1-216ENST00000569122 LIMK1P53667 647 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 SIM2Q14190 667 aaPredicted RBP9.73□□□□□ -0.85
SMG1-216ENST00000569122 TARBP2Q15633 366 aaKnown RBP9.73□□□□□ -0.85
SMG1-216ENST00000569122 UVSSAQ2YD98 709 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 PPM1LQ5SGD2 360 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 PDXDC1Q6P996 788 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 PRR23BQ6ZRT6 265 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 SPATA31D4Q6ZUB0 917 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 TPRG1Q6ZUI0 275 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 SRGAP1Q7Z6B7 1085 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 GRASPQ7Z6J2 395 aaPredicted RBP9.73□□□□□ -0.85
SMG1-216ENST00000569122 RHPN2Q8IUC4 686 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 SMC5Q8IY18 1101 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 COLGALT2Q8IYK4 626 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 RNF168Q8IYW5 571 aaPredicted RBP9.73□□□□□ -0.85
SMG1-216ENST00000569122 CCDC12Q8WUD4 166 aaPredicted RBP9.73□□□□□ -0.85
SMG1-216ENST00000569122 DNASE1L2Q92874 299 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 FGF13Q92913 245 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 MBOAT7Q96N66 472 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 RIT2Q99578 217 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 RPP25Q9BUL9 199 aaKnown RBP9.73□□□□□ -0.85
SMG1-216ENST00000569122 GDE1Q9NZC3 331 aa9.73□□□□□ -0.85
SMG1-216ENST00000569122 MAP1BP46821 2468 aaKnown RBP9.73□□□□□ -0.85
SMG1-216ENST00000569122 BAZ2BQ9UIF8 2168 aaKnown RBP9.73□□□□□ -0.85
SMG1-216ENST00000569122 IGKV6-21A0A0C4DH24 114 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 MEIS3P2A8K0S8 358 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 SH2B2O14492 632 aaPredicted RBP9.72□□□□□ -0.85
SMG1-216ENST00000569122 ZNF862O60290 1169 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 ECI2O75521 394 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 EFEMP2O95967 443 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 MYBP10242 640 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 NCLP19338 710 aaKnown RBP9.72□□□□□ -0.85
SMG1-216ENST00000569122 CD72P21854 359 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 CIITAP33076 1130 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 NUCB1Q02818 461 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 MTAPQ13126 283 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 PRR16Q569H4 304 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 B4GALNT3Q6L9W6 998 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 C1orf228Q6PIY5 440 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 TSSK4Q6SA08 328 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 TAS1R1Q7RTX1 841 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.72□□□□□ -0.85
SMG1-216ENST00000569122 SGMS1Q86VZ5 419 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 CCDC51Q96ER9 411 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 NLRP4Q96MN2 994 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 CHRDQ9H2X0 955 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 MARCH5Q9NX47 278 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 PPME1Q9Y570 386 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 V9GY48 417 aaPredicted RBP9.72□□□□□ -0.85
SMG1-216ENST00000569122 DOCK5Q9H7D0 1870 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 FAM208BQ5VWN6 2430 aa9.72□□□□□ -0.85
SMG1-216ENST00000569122 CACNA1IQ9P0X4 2223 aa9.71□□□□□ -0.85
SMG1-216ENST00000569122 TMEM8BA6NDV4 472 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 ASAP2O43150 1006 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 DKC1O60832 514 aaKnown RBP eCLIP9.71□□□□□ -0.864e-9■■■■■ 30.3
SMG1-216ENST00000569122 GAS7O60861 476 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 MAFO75444 373 aaPredicted RBP9.71□□□□□ -0.86
SMG1-216ENST00000569122 TADA2AO75478 443 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 RXRAP19793 462 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 GNA11P29992 359 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 AXLP30530 894 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 CXCL12P48061 93 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 PTH1RQ03431 593 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 DSC1Q08554 894 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 LPAL2Q16609 132 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 MTERF2Q49AM1 385 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms