RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 KRT4P19013 534 aa4.3□□□□□ -1.72
BBS4-215ENST00000569001 ZFP36P26651 326 aaKnown RBP4.3□□□□□ -1.72
BBS4-215ENST00000569001 APOBEC3AP31941 199 aaPredicted RBP4.3□□□□□ -1.72
BBS4-215ENST00000569001 FAM189BP81408 668 aa4.3□□□□□ -1.72
BBS4-215ENST00000569001 FSTL1Q12841 308 aa4.3□□□□□ -1.72
BBS4-215ENST00000569001 RABL3Q5HYI8 236 aa4.3□□□□□ -1.72
BBS4-215ENST00000569001 MFSD5Q6N075 450 aa4.3□□□□□ -1.72
BBS4-215ENST00000569001 DDX46Q7L014 1031 aaKnown RBP4.3□□□□□ -1.72
BBS4-215ENST00000569001 NOP9Q86U38 636 aaKnown RBP4.3□□□□□ -1.72
BBS4-215ENST00000569001 RASSF3Q86WH2 238 aa4.3□□□□□ -1.72
BBS4-215ENST00000569001 LDLRAD3Q86YD5 345 aa4.3□□□□□ -1.72
BBS4-215ENST00000569001 VRK3Q8IV63 474 aa4.3□□□□□ -1.72
BBS4-215ENST00000569001 ZNF276Q8N554 614 aa4.3□□□□□ -1.72
BBS4-215ENST00000569001 LILRA3Q8N6C8 439 aaPredicted RBP4.3□□□□□ -1.72
BBS4-215ENST00000569001 RNF169Q8NCN4 708 aa4.3□□□□□ -1.72
BBS4-215ENST00000569001 MDM1Q8TC05 714 aa4.3□□□□□ -1.72
BBS4-215ENST00000569001 IL17RAQ96F46 866 aa4.3□□□□□ -1.72
BBS4-215ENST00000569001 FAM126AQ9BYI3 521 aaPredicted RBP4.3□□□□□ -1.72
BBS4-215ENST00000569001 TRPS1Q9UHF7 1281 aa4.3□□□□□ -1.72
BBS4-215ENST00000569001 DPP7Q9UHL4 492 aa4.3□□□□□ -1.72
BBS4-215ENST00000569001 CDY2AQ9Y6F7 541 aa4.3□□□□□ -1.72
BBS4-215ENST00000569001 TLDC2A0PJX2 215 aa4.29□□□□□ -1.72
BBS4-215ENST00000569001 GOLGA6L6A8MZA4 724 aa4.29□□□□□ -1.72
BBS4-215ENST00000569001 LEFTY2O00292 366 aa4.29□□□□□ -1.72
BBS4-215ENST00000569001 SCAF4O95104 1147 aaKnown RBP4.29□□□□□ -1.72
BBS4-215ENST00000569001 MAKP20794 623 aa4.29□□□□□ -1.72
BBS4-215ENST00000569001 NRG3P56975 720 aa4.29□□□□□ -1.72
BBS4-215ENST00000569001 SCAND1P57086 179 aa4.29□□□□□ -1.72
BBS4-215ENST00000569001 TGFB2P61812 414 aa4.29□□□□□ -1.72
BBS4-215ENST00000569001 MRPL49Q13405 166 aaKnown RBP4.29□□□□□ -1.72
BBS4-215ENST00000569001 DHCR24Q15392 516 aa4.29□□□□□ -1.72
BBS4-215ENST00000569001 HTR3DQ70Z44 454 aa4.29□□□□□ -1.72
BBS4-215ENST00000569001 APBB1IPQ7Z5R6 666 aaPredicted RBP4.29□□□□□ -1.72
BBS4-215ENST00000569001 GLB1L2Q8IW92 636 aa4.29□□□□□ -1.72
BBS4-215ENST00000569001 RPUSD2Q8IZ73 545 aaKnown RBP4.29□□□□□ -1.72
BBS4-215ENST00000569001 GLB1L3Q8NCI6 653 aaPredicted RBP4.29□□□□□ -1.72
BBS4-215ENST00000569001 REPS2Q8NFH8 660 aa4.29□□□□□ -1.72
BBS4-215ENST00000569001 OR52N2Q8NGI0 321 aa4.29□□□□□ -1.72
BBS4-215ENST00000569001 OR14C36Q8NHC7 312 aa4.29□□□□□ -1.72
BBS4-215ENST00000569001 CEP95Q96GE4 821 aa4.29□□□□□ -1.72
BBS4-215ENST00000569001 TTC1Q99614 292 aa4.29□□□□□ -1.72
BBS4-215ENST00000569001 QRSL1Q9H0R6 528 aaKnown RBP4.29□□□□□ -1.72
BBS4-215ENST00000569001 SLITRK6Q9H5Y7 841 aa4.29□□□□□ -1.72
BBS4-215ENST00000569001 IFT22Q9H7X7 185 aa4.29□□□□□ -1.72
BBS4-215ENST00000569001 SPON1Q9HCB6 807 aa4.29□□□□□ -1.72
BBS4-215ENST00000569001 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.28□□□□□ -1.72
BBS4-215ENST00000569001 AHRRA9YTQ3 701 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 OVOL3O00110 214 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 NRP1O14786 923 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 NRP2O60462 931 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 LPXNO60711 386 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 ITGA10O75578 1167 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 LTA4HP09960 611 aaKnown RBP4.28□□□□□ -1.72
BBS4-215ENST00000569001 CTSSP25774 331 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 ADSLP30566 484 aaPredicted RBP4.28□□□□□ -1.72
BBS4-215ENST00000569001 GPR15P49685 360 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 GZMKP49863 264 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 TMPRSS15P98073 1019 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 UGT8Q16880 541 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 SDE2Q6IQ49 451 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 ZNF662Q6ZS27 426 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 MRGPREQ86SM8 312 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 SYT12Q8IV01 421 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 COG1Q8WTW3 980 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 SLC25A43Q8WUT9 341 aaPredicted RBP4.28□□□□□ -1.72
BBS4-215ENST00000569001 CEP89Q96ST8 783 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 TTPALQ9BTX7 342 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 EIF2B4Q9UI10 523 aaKnown RBP4.28□□□□□ -1.72
BBS4-215ENST00000569001 KCNG1Q9UIX4 513 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.28□□□□□ -1.72
BBS4-215ENST00000569001 HDAC5Q9UQL6 1122 aa4.28□□□□□ -1.72
BBS4-215ENST00000569001 A0A087X1B8 175 aa4.27□□□□□ -1.73
BBS4-215ENST00000569001 MASP1P48740 699 aa4.27□□□□□ -1.73
BBS4-215ENST00000569001 APBA1Q02410 837 aa4.27□□□□□ -1.73
BBS4-215ENST00000569001 DPTQ07507 201 aa4.27□□□□□ -1.73
BBS4-215ENST00000569001 VPS72Q15906 364 aa4.27□□□□□ -1.73
BBS4-215ENST00000569001 FSCN1Q16658 493 aaKnown RBP4.27□□□□□ -1.73
BBS4-215ENST00000569001 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.27□□□□□ -1.73
BBS4-215ENST00000569001 MFSD14BQ5SR56 506 aa4.27□□□□□ -1.73
BBS4-215ENST00000569001 PRAMEF14Q5SWL7 426 aa4.27□□□□□ -1.73
BBS4-215ENST00000569001 SLC35B2Q8TB61 432 aa4.27□□□□□ -1.73
BBS4-215ENST00000569001 TSPEARQ8WU66 669 aa4.27□□□□□ -1.73
BBS4-215ENST00000569001 SNX33Q8WV41 574 aa4.27□□□□□ -1.73
BBS4-215ENST00000569001 CDC5LQ99459 802 aaKnown RBP4.27□□□□□ -1.73
BBS4-215ENST00000569001 CAAP1Q9H8G2 361 aa4.27□□□□□ -1.73
BBS4-215ENST00000569001 DMRT3Q9NQL9 472 aa4.27□□□□□ -1.73
BBS4-215ENST00000569001 GPRC5DQ9NZD1 345 aa4.27□□□□□ -1.73
BBS4-215ENST00000569001 TRPM5Q9NZQ8 1165 aa4.27□□□□□ -1.73
BBS4-215ENST00000569001 GOLGA8AA7E2F4 631 aa4.26□□□□□ -1.73
BBS4-215ENST00000569001 ZNF185O15231 689 aa4.26□□□□□ -1.73
BBS4-215ENST00000569001 NCR1O76036 304 aa4.26□□□□□ -1.73
BBS4-215ENST00000569001 GYPEP15421 78 aa4.26□□□□□ -1.73
BBS4-215ENST00000569001 ENPP1P22413 925 aa4.26□□□□□ -1.73
BBS4-215ENST00000569001 RNASE9P60153 205 aaKnown RBP4.26□□□□□ -1.73
BBS4-215ENST00000569001 SRSF2Q01130 221 aaKnown RBP4.26□□□□□ -1.73
BBS4-215ENST00000569001 STAT4Q14765 748 aa4.26□□□□□ -1.73
BBS4-215ENST00000569001 DCAF17Q5H9S7 520 aaPredicted RBP4.26□□□□□ -1.73
BBS4-215ENST00000569001 TOR2AQ5JU69 321 aa4.26□□□□□ -1.73
BBS4-215ENST00000569001 NAIF1Q69YI7 327 aaPredicted RBP4.26□□□□□ -1.73
BBS4-215ENST00000569001 PCSK4Q6UW60 755 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms