RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 STXBP5LQ9Y2K9 1186 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 TAF1LQ8IZX4 1826 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 COL4A1P02462 1669 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 ASTN1O14525 1302 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 LOXHD1Q8IVV2 1947 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 CFAP73A6NFT4 308 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 ZNF233A6NK53 670 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 UBAP1LF5GYI3 381 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 K7ENM7 598 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 MEIS1O00470 390 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 DDX3XO00571 662 aaKnown RBP eCLIP8.22□□□□□ -1.09
ATXN3-250ENST00000568290 ASAP2O43150 1006 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 CFBP00751 764 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 KRT14P02533 472 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 TFRCP02786 760 aaKnown RBP8.22□□□□□ -1.09
ATXN3-250ENST00000568290 ASNSP08243 561 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 GSTA1P08263 222 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 PLS3P13797 630 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 ITIH2P19823 946 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 CTNNA2P26232 953 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 MXI1P50539 228 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 PDE6CP51160 858 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 SCNN1DP51172 638 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 MNAT1P51948 309 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 PMS2P54278 862 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 RWDD2BP57060 319 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 KRT76Q01546 638 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 MAPK7Q13164 816 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 PDCLQ13371 301 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 ITIH4Q14624 930 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 PLS1Q14651 629 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 LIN9Q5TKA1 542 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 NAA35Q5VZE5 725 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 TMC3Q7Z5M5 1100 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 SULF1Q8IWU6 871 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 GSPT2Q8IYD1 628 aaKnown RBP8.22□□□□□ -1.09
ATXN3-250ENST00000568290 RIBC1Q8N443 379 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-250ENST00000568290 TSEN2Q8NCE0 465 aaKnown RBP8.22□□□□□ -1.09
ATXN3-250ENST00000568290 MYCBPAPQ8TBZ2 947 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 FAM151AQ8WW52 585 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 RIN2Q8WYP3 895 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-250ENST00000568290 LPAR1Q92633 364 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 RNF166Q96A37 237 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-250ENST00000568290 GRAMD1AQ96CP6 724 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 CHMP6Q96FZ7 201 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 DYDC2Q96IM9 177 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 CDHR1Q96JP9 859 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 IFT74Q96LB3 600 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 CSRNP1Q96S65 589 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 MXRA8Q9BRK3 442 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 MOV10L1Q9BXT6 1211 aaKnown RBP8.22□□□□□ -1.09
ATXN3-250ENST00000568290 RANBP17Q9H2T7 1088 aaKnown RBP8.22□□□□□ -1.09
ATXN3-250ENST00000568290 ANKEF1Q9NU02 776 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 TMEM51Q9NW97 253 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 BCCIPQ9P287 314 aaKnown RBP eCLIP8.22□□□□□ -1.09
ATXN3-250ENST00000568290 TSR3Q9UJK0 312 aaKnown RBP8.22□□□□□ -1.09
ATXN3-250ENST00000568290 SALL4Q9UJQ4 1053 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 GTF3C4Q9UKN8 822 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 PRR12Q9ULL5 1215 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 GRIN2DO15399 1336 aa8.22□□□□□ -1.09
ATXN3-250ENST00000568290 TAF1P21675 1872 aa8.21□□□□□ -1.09
ATXN3-250ENST00000568290 CDK5RAP2Q96SN8 1893 aa8.21□□□□□ -1.09
ATXN3-250ENST00000568290 GOLGA8CPA6NN73 597 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 FAM86B1E9PN63 330 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 IPO5O00410 1097 aaKnown RBP8.21□□□□□ -1.1
ATXN3-250ENST00000568290 ATP2A1O14983 1001 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 CHUKO15111 745 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 TRAPPC3O43617 180 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 SPOPO43791 374 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 EDIL3O43854 480 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 STAM2O75886 525 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 SLITRK3O94933 977 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 ECEL1O95672 775 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 FAM86B2P0C5J1 330 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 ACTN1P12814 892 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 RARGP13631 454 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 EZRP15311 586 aaKnown RBP8.21□□□□□ -1.1
ATXN3-250ENST00000568290 STAT3P40763 770 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 QARSP47897 775 aaKnown RBP8.21□□□□□ -1.1
ATXN3-250ENST00000568290 DNA2P51530 1060 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 KCNQ4P56696 695 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 MCCD1P59942 119 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-250ENST00000568290 ERVK-9P63128 1117 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 PPATQ06203 517 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 EZH2Q15910 746 aaKnown RBP8.21□□□□□ -1.1
ATXN3-250ENST00000568290 WDR44Q5JSH3 913 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 KCTD16Q68DU8 428 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 DUPD1Q68J44 220 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 KRT39Q6A163 491 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 FAM83AQ86UY5 434 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 GLYCTKQ8IVS8 523 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 CCDC105Q8IYK2 499 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 SEPT12Q8IYM1 358 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 PRPF38AQ8NAV1 312 aaKnown RBP8.21□□□□□ -1.1
ATXN3-250ENST00000568290 CCDC197Q8NCU1 140 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 MAGEC3Q8TD91 643 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 SLCO2A1Q92959 643 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 MAGOHBQ96A72 148 aaKnown RBP8.21□□□□□ -1.1
ATXN3-250ENST00000568290 LENG9Q96B70 501 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 ARL8AQ96BM9 186 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms