RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 LONRF3Q496Y0 759 aa18.94■□□□□ 0.62
COMMD4-220ENST00000567720 SLC27A1Q6PCB7 646 aa18.94■□□□□ 0.62
COMMD4-220ENST00000567720 GRAMD1CQ8IYS0 662 aa18.94■□□□□ 0.62
COMMD4-220ENST00000567720 PYM1Q9BRP8 204 aaKnown RBP18.94■□□□□ 0.62
COMMD4-220ENST00000567720 NXF3Q9H4D5 531 aaKnown RBP18.94■□□□□ 0.62
COMMD4-220ENST00000567720 RNF216Q9NWF9 866 aaPredicted RBP18.94■□□□□ 0.62
COMMD4-220ENST00000567720 IPPQ9Y573 584 aa18.94■□□□□ 0.62
COMMD4-220ENST00000567720 EPOPA6NHQ4 379 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 TBKBP1A7MCY6 615 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 N4BP3O15049 544 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 TRAK2O60296 914 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 EOMESO95936 686 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 SKIP12755 728 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 NMT1P30419 496 aaKnown RBP18.93■□□□□ 0.62
COMMD4-220ENST00000567720 SYKP43405 635 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 NCBP1Q09161 790 aaKnown RBP18.93■□□□□ 0.62
COMMD4-220ENST00000567720 BTG3Q14201 252 aaPredicted RBP18.93■□□□□ 0.62
COMMD4-220ENST00000567720 ATF7IP2Q5U623 682 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 AGMOQ6ZNB7 445 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 HAUS6Q7Z4H7 955 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 FAM178BQ8IXR5 827 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 HELQQ8TDG4 1101 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 GUCD1Q96NT3 240 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 CASD1Q96PB1 797 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 C17orf80Q9BSJ5 609 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 SEMA6BQ9H3T3 888 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 CERS4Q9HA82 394 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 MTUS1Q9ULD2 1270 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 HES2Q9Y543 173 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 MRPL42Q9Y6G3 142 aaKnown RBP18.93■□□□□ 0.62
COMMD4-220ENST00000567720 COL6A3P12111 3177 aa18.93■□□□□ 0.62
COMMD4-220ENST00000567720 ABLIM1O14639 778 aa18.92■□□□□ 0.62
COMMD4-220ENST00000567720 HOXA2O43364 376 aa18.92■□□□□ 0.62
COMMD4-220ENST00000567720 SLFN14P0C7P3 912 aa18.92■□□□□ 0.62
COMMD4-220ENST00000567720 IDEP14735 1019 aa18.92■□□□□ 0.62
COMMD4-220ENST00000567720 GAP43P17677 238 aa18.92■□□□□ 0.62
COMMD4-220ENST00000567720 ASIC1P78348 528 aa18.92■□□□□ 0.62
COMMD4-220ENST00000567720 COASYQ13057 564 aa18.92■□□□□ 0.62
COMMD4-220ENST00000567720 GRIN2CQ14957 1233 aa18.92■□□□□ 0.62
COMMD4-220ENST00000567720 TMEM132AQ24JP5 1023 aa18.92■□□□□ 0.62
COMMD4-220ENST00000567720 CNNM4Q6P4Q7 775 aa18.92■□□□□ 0.62
COMMD4-220ENST00000567720 MRPL10Q7Z7H8 261 aaKnown RBP18.92■□□□□ 0.62
COMMD4-220ENST00000567720 CEP57L1Q8IYX8 460 aa18.92■□□□□ 0.62
COMMD4-220ENST00000567720 FIBCD1Q8N539 461 aa18.92■□□□□ 0.62
COMMD4-220ENST00000567720 ACO2Q99798 780 aaKnown RBP18.92■□□□□ 0.62
COMMD4-220ENST00000567720 TARS2Q9BW92 718 aaKnown RBP18.92■□□□□ 0.62
COMMD4-220ENST00000567720 MRPL4Q9BYD3 311 aaKnown RBP18.92■□□□□ 0.62
COMMD4-220ENST00000567720 FGFBP2Q9BYJ0 223 aa18.92■□□□□ 0.62
COMMD4-220ENST00000567720 TMEM117Q9H0C3 514 aa18.92■□□□□ 0.62
COMMD4-220ENST00000567720 BLZF1Q9H2G9 400 aa18.92■□□□□ 0.62
COMMD4-220ENST00000567720 MTMR10Q9NXD2 777 aa18.92■□□□□ 0.62
COMMD4-220ENST00000567720 SEL1LQ9UBV2 794 aa18.92■□□□□ 0.62
COMMD4-220ENST00000567720 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.91■□□□□ 0.62
COMMD4-220ENST00000567720 H0YCG3 227 aa18.91■□□□□ 0.62
COMMD4-220ENST00000567720 PPP1R37O75864 691 aa18.91■□□□□ 0.62
COMMD4-220ENST00000567720 PROZP22891 400 aa18.91■□□□□ 0.62
COMMD4-220ENST00000567720 AFMP43652 599 aa18.91■□□□□ 0.62
COMMD4-220ENST00000567720 ERVK-21P61565 698 aa18.91■□□□□ 0.62
COMMD4-220ENST00000567720 CUL4BQ13620 913 aa18.91■□□□□ 0.62
COMMD4-220ENST00000567720 LRRC43Q8N309 656 aa18.91■□□□□ 0.62
COMMD4-220ENST00000567720 TMEM87AQ8NBN3 555 aa18.91■□□□□ 0.62
COMMD4-220ENST00000567720 ARNTL2Q8WYA1 636 aa18.91■□□□□ 0.62
COMMD4-220ENST00000567720 CLP1Q92989 425 aaKnown RBP18.91■□□□□ 0.62
COMMD4-220ENST00000567720 TGS1Q96RS0 853 aaKnown RBP18.91■□□□□ 0.62
COMMD4-220ENST00000567720 C7orf25Q9BPX7 421 aa18.91■□□□□ 0.62
COMMD4-220ENST00000567720 TRIM6Q9C030 488 aaPredicted RBP18.91■□□□□ 0.62
COMMD4-220ENST00000567720 CDT1Q9H211 546 aa18.91■□□□□ 0.62
COMMD4-220ENST00000567720 RNF39Q9H2S5 420 aa18.91■□□□□ 0.62
COMMD4-220ENST00000567720 ST6GALNAC4Q9H4F1 302 aa18.91■□□□□ 0.62
COMMD4-220ENST00000567720 OLFML3Q9NRN5 406 aa18.91■□□□□ 0.62
COMMD4-220ENST00000567720 PANK4Q9NVE7 773 aa18.91■□□□□ 0.62
COMMD4-220ENST00000567720 TBC1D7Q9P0N9 293 aa18.91■□□□□ 0.62
COMMD4-220ENST00000567720 KCNG1Q9UIX4 513 aa18.91■□□□□ 0.62
COMMD4-220ENST00000567720 TNFSF13BQ9Y275 285 aa18.91■□□□□ 0.62
COMMD4-220ENST00000567720 CASP5P51878 434 aa18.9■□□□□ 0.62
COMMD4-220ENST00000567720 AMPD3Q01432 767 aa18.9■□□□□ 0.62
COMMD4-220ENST00000567720 STRN3Q13033 797 aa18.9■□□□□ 0.62
COMMD4-220ENST00000567720 DCAF4L1Q3SXM0 396 aa18.9■□□□□ 0.62
COMMD4-220ENST00000567720 ZNF568Q3ZCX4 644 aa18.9■□□□□ 0.62
COMMD4-220ENST00000567720 ZC2HC1CQ53FD0 456 aaPredicted RBP18.9■□□□□ 0.62
COMMD4-220ENST00000567720 MAP4K3Q8IVH8 894 aa18.9■□□□□ 0.62
COMMD4-220ENST00000567720 ABI1Q8IZP0 508 aa18.9■□□□□ 0.62
COMMD4-220ENST00000567720 CNNM3Q8NE01 707 aa18.9■□□□□ 0.62
COMMD4-220ENST00000567720 HPS3Q969F9 1004 aa18.9■□□□□ 0.62
COMMD4-220ENST00000567720 PGBD4Q96DM1 585 aa18.9■□□□□ 0.62
COMMD4-220ENST00000567720 PAGE5Q96GU1 130 aa18.9■□□□□ 0.62
COMMD4-220ENST00000567720 ADPGKQ9BRR6 497 aa18.9■□□□□ 0.62
COMMD4-220ENST00000567720 APOL6Q9BWW8 343 aa18.9■□□□□ 0.62
COMMD4-220ENST00000567720 LRRC27Q9C0I9 530 aa18.9■□□□□ 0.62
COMMD4-220ENST00000567720 PRDM12Q9H4Q4 367 aa18.9■□□□□ 0.62
COMMD4-220ENST00000567720 RSAD1Q9HA92 442 aa18.9■□□□□ 0.62
COMMD4-220ENST00000567720 PTPRHQ9HD43 1115 aa18.9■□□□□ 0.62
COMMD4-220ENST00000567720 USP25Q9UHP3 1055 aa18.9■□□□□ 0.62
COMMD4-220ENST00000567720 TBX20Q9UMR3 447 aa18.9■□□□□ 0.62
COMMD4-220ENST00000567720 PRRC2BQ5JSZ5 2229 aaKnown RBP18.89■□□□□ 0.61
COMMD4-220ENST00000567720 PRR29P0C7W0 189 aa18.89■□□□□ 0.61
COMMD4-220ENST00000567720 MLH1P40692 756 aa18.89■□□□□ 0.61
COMMD4-220ENST00000567720 AFF1P51825 1210 aaKnown RBP18.89■□□□□ 0.61
COMMD4-220ENST00000567720 GTF2BQ00403 316 aa18.89■□□□□ 0.61
COMMD4-220ENST00000567720 EHHADHQ08426 723 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms