RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 FAM189BP81408 668 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 OCRLQ01968 901 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 DSG1Q02413 1049 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 CCDC144BQ3MJ40 725 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 STRIP1Q5VSL9 837 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 TAS1R1Q7RTX1 841 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 GDF7Q7Z4P5 450 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 C11orf74Q86VG3 221 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 LRRTM3Q86VH5 581 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 HOMER1Q86YM7 354 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 GLB1L2Q8IW92 636 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 CMTR2Q8IYT2 770 aaKnown RBP4.81□□□□□ -1.64
CDH1-211ENST00000567320 SYNPOQ8N3V7 929 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 BEND2Q8NDZ0 799 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 PPP1R14CQ8TAE6 165 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 CAVIN3Q969G5 261 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 DCLRE1CQ96SD1 692 aaKnown RBP4.81□□□□□ -1.64
CDH1-211ENST00000567320 CDC5LQ99459 802 aaKnown RBP4.81□□□□□ -1.64
CDH1-211ENST00000567320 LSM14BQ9BX40 385 aaKnown RBP4.81□□□□□ -1.64
CDH1-211ENST00000567320 ANO3Q9BYT9 981 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 ENKD1Q9H0I2 346 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 AKIP1Q9NQ31 210 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 PTGFRNQ9P2B2 879 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 CLCA2Q9UQC9 943 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 CENPVL1A0A0U1RR11 272 aa4.8□□□□□ -1.64
CDH1-211ENST00000567320 PRSS38A1L453 326 aa4.8□□□□□ -1.64
CDH1-211ENST00000567320 ZAR1LA6NP61 321 aa4.8□□□□□ -1.64
CDH1-211ENST00000567320 AHRRA9YTQ3 701 aa4.8□□□□□ -1.64
CDH1-211ENST00000567320 TGM5O43548 720 aa4.8□□□□□ -1.64
CDH1-211ENST00000567320 PFKMP08237 780 aa4.8□□□□□ -1.64
CDH1-211ENST00000567320 CLEC2LP0C7M8 214 aa4.8□□□□□ -1.64
CDH1-211ENST00000567320 LMO1P25800 156 aa4.8□□□□□ -1.64
CDH1-211ENST00000567320 ADRA1BP35368 520 aa4.8□□□□□ -1.64
CDH1-211ENST00000567320 GPR15P49685 360 aa4.8□□□□□ -1.64
CDH1-211ENST00000567320 MRPS21P82921 87 aaKnown RBP4.8□□□□□ -1.64
CDH1-211ENST00000567320 APBA1Q02410 837 aa4.8□□□□□ -1.64
CDH1-211ENST00000567320 NHLH2Q02577 135 aa4.8□□□□□ -1.64
CDH1-211ENST00000567320 UBE3CQ15386 1083 aa4.8□□□□□ -1.64
CDH1-211ENST00000567320 METTL24Q5JXM2 366 aa4.8□□□□□ -1.64
CDH1-211ENST00000567320 DHX37Q8IY37 1157 aaKnown RBP4.8□□□□□ -1.64
CDH1-211ENST00000567320 MYEOVQ96EZ4 313 aa4.8□□□□□ -1.64
CDH1-211ENST00000567320 FDXACB1Q9BRP7 624 aaPredicted RBP4.8□□□□□ -1.64
CDH1-211ENST00000567320 WDR11Q9BZH6 1224 aa4.8□□□□□ -1.64
CDH1-211ENST00000567320 MS4A5Q9H3V2 200 aa4.8□□□□□ -1.64
CDH1-211ENST00000567320 HS3ST4Q9Y661 456 aa4.8□□□□□ -1.64
CDH1-211ENST00000567320 GRID2IPA4D2P6 1211 aa4.79□□□□□ -1.64
CDH1-211ENST00000567320 LEFTY2O00292 366 aa4.79□□□□□ -1.64
CDH1-211ENST00000567320 KIAA0355O15063 1070 aa4.79□□□□□ -1.64
CDH1-211ENST00000567320 PCBP1Q15365 356 aaKnown RBP eCLIP4.79□□□□□ -1.64
CDH1-211ENST00000567320 EFCAB12Q6NXP0 572 aa4.79□□□□□ -1.64
CDH1-211ENST00000567320 CCDC62Q6P9F0 684 aa4.79□□□□□ -1.64
CDH1-211ENST00000567320 OLFML1Q6UWY5 402 aa4.79□□□□□ -1.64
CDH1-211ENST00000567320 FRMD7Q6ZUT3 714 aa4.79□□□□□ -1.64
CDH1-211ENST00000567320 DOK3Q7L591 496 aa4.79□□□□□ -1.64
CDH1-211ENST00000567320 LILRA3Q8N6C8 439 aaPredicted RBP4.79□□□□□ -1.64
CDH1-211ENST00000567320 ZNF610Q8N9Z0 462 aa4.79□□□□□ -1.64
CDH1-211ENST00000567320 OR10H5Q8NGA6 315 aa4.79□□□□□ -1.64
CDH1-211ENST00000567320 PHACTR3Q96KR7 559 aa4.79□□□□□ -1.64
CDH1-211ENST00000567320 ORAI3Q9BRQ5 295 aa4.79□□□□□ -1.64
CDH1-211ENST00000567320 MTFR1LQ9H019 292 aa4.79□□□□□ -1.64
CDH1-211ENST00000567320 TOR3AQ9H497 397 aa4.79□□□□□ -1.64
CDH1-211ENST00000567320 SERHL2Q9H4I8 314 aa4.79□□□□□ -1.64
CDH1-211ENST00000567320 SPTLC3Q9NUV7 552 aa4.79□□□□□ -1.64
CDH1-211ENST00000567320 MASP2O00187 686 aa4.78□□□□□ -1.64
CDH1-211ENST00000567320 KDM1AO60341 852 aa4.78□□□□□ -1.64
CDH1-211ENST00000567320 SEC24DO94855 1032 aaPredicted RBP4.78□□□□□ -1.64
CDH1-211ENST00000567320 HLA-DOAP06340 250 aa4.78□□□□□ -1.64
CDH1-211ENST00000567320 LTA4HP09960 611 aaKnown RBP4.78□□□□□ -1.64
CDH1-211ENST00000567320 ZFP36P26651 326 aaKnown RBP4.78□□□□□ -1.64
CDH1-211ENST00000567320 ZEB1P37275 1124 aaPredicted RBP4.78□□□□□ -1.64
CDH1-211ENST00000567320 AVPR1BP47901 424 aa4.78□□□□□ -1.64
CDH1-211ENST00000567320 TAP1Q03518 808 aa4.78□□□□□ -1.64
CDH1-211ENST00000567320 CCDC178Q5BJE1 867 aa4.78□□□□□ -1.64
CDH1-211ENST00000567320 PLXDC1Q8IUK5 500 aa4.78□□□□□ -1.64
CDH1-211ENST00000567320 NIM1KQ8IY84 436 aa4.78□□□□□ -1.64
CDH1-211ENST00000567320 AHI1Q8N157 1196 aa4.78□□□□□ -1.64
CDH1-211ENST00000567320 RNF169Q8NCN4 708 aa4.78□□□□□ -1.64
CDH1-211ENST00000567320 SMC1BQ8NDV3 1235 aa4.78□□□□□ -1.64
CDH1-211ENST00000567320 OR2W6PQ8NHA6 318 aa4.78□□□□□ -1.64
CDH1-211ENST00000567320 MDM1Q8TC05 714 aa4.78□□□□□ -1.64
CDH1-211ENST00000567320 APPBP2Q92624 585 aa4.78□□□□□ -1.64
CDH1-211ENST00000567320 FANCLQ9NW38 375 aa4.78□□□□□ -1.64
CDH1-211ENST00000567320 NOC2LQ9Y3T9 749 aaKnown RBP4.78□□□□□ -1.64
CDH1-211ENST00000567320 NUMBLQ9Y6R0 609 aa4.78□□□□□ -1.64
CDH1-211ENST00000567320 ZMYM3Q14202 1370 aa4.78□□□□□ -1.64
CDH1-211ENST00000567320 A0A1W2PR48 441 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 GAGE12BA1L429 117 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 GAGE12HA6NDE8 117 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 UNC119BA6NIH7 251 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 SPATA31D3P0C874 917 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 MGAT1P26572 445 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 CANXP27824 592 aaKnown RBP4.77□□□□□ -1.65
CDH1-211ENST00000567320 MXRA7P84157 204 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 GUCY1B3Q02153 619 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 DDB1Q16531 1140 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 CCDC142Q17RM4 750 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 TKFCQ3LXA3 575 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 GPR158Q5T848 1215 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 Q6YL49 198 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 SPATA31D4Q6ZUB0 917 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms