RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 GPR152Q8TDT2 470 aa12.61□□□□□ -0.39
SPG7-216ENST00000567138 SMG7Q92540 1137 aaKnown RBP12.61□□□□□ -0.39
SPG7-216ENST00000567138 BRF1Q92994 677 aa12.61□□□□□ -0.39
SPG7-216ENST00000567138 PHKBQ93100 1093 aa12.61□□□□□ -0.39
SPG7-216ENST00000567138 RIT2Q99578 217 aa12.61□□□□□ -0.39
SPG7-216ENST00000567138 NIFKQ9BYG3 293 aaKnown RBP12.61□□□□□ -0.39
SPG7-216ENST00000567138 AGXT2Q9BYV1 514 aa12.61□□□□□ -0.39
SPG7-216ENST00000567138 INO80BQ9C086 356 aaPredicted RBP12.61□□□□□ -0.39
SPG7-216ENST00000567138 SEMA4AQ9H3S1 761 aa12.61□□□□□ -0.39
SPG7-216ENST00000567138 WDR6Q9NNW5 1121 aaKnown RBP12.61□□□□□ -0.39
SPG7-216ENST00000567138 AGPAT5Q9NUQ2 364 aa12.61□□□□□ -0.39
SPG7-216ENST00000567138 MARCH5Q9NX47 278 aa12.61□□□□□ -0.39
SPG7-216ENST00000567138 SPTBN2O15020 2390 aa12.61□□□□□ -0.39
SPG7-216ENST00000567138 DDX11L8A8MPP1 907 aa12.6□□□□□ -0.39
SPG7-216ENST00000567138 TEX28O15482 410 aa12.6□□□□□ -0.39
SPG7-216ENST00000567138 GLUD1P00367 558 aa12.6□□□□□ -0.39
SPG7-216ENST00000567138 SOD2P04179 222 aa12.6□□□□□ -0.39
SPG7-216ENST00000567138 ADH1AP07327 375 aa12.6□□□□□ -0.39
SPG7-216ENST00000567138 SPATA31D3P0C874 917 aa12.6□□□□□ -0.39
SPG7-216ENST00000567138 SP9P0CG40 484 aa12.6□□□□□ -0.39
SPG7-216ENST00000567138 CDC42EP1Q00587 391 aa12.6□□□□□ -0.39
SPG7-216ENST00000567138 TOB2Q14106 344 aaPredicted RBP12.6□□□□□ -0.39
SPG7-216ENST00000567138 NONOQ15233 471 aaKnown RBP eCLIP12.6□□□□□ -0.39
SPG7-216ENST00000567138 SPATA31D4Q6ZUB0 917 aa12.6□□□□□ -0.39
SPG7-216ENST00000567138 GET4Q7L5D6 327 aaPredicted RBP12.6□□□□□ -0.39
SPG7-216ENST00000567138 SLC44A3Q8N4M1 653 aa12.6□□□□□ -0.39
SPG7-216ENST00000567138 DCLK2Q8N568 766 aa12.6□□□□□ -0.39
SPG7-216ENST00000567138 STAMQ92783 540 aa12.6□□□□□ -0.39
SPG7-216ENST00000567138 RPS6KC1Q96S38 1066 aa12.6□□□□□ -0.39
SPG7-216ENST00000567138 LARP6Q9BRS8 491 aaKnown RBP12.6□□□□□ -0.39
SPG7-216ENST00000567138 TMEM175Q9BSA9 504 aa12.6□□□□□ -0.39
SPG7-216ENST00000567138 VPS54Q9P1Q0 977 aa12.6□□□□□ -0.39
SPG7-216ENST00000567138 EPS15L1Q9UBC2 864 aa12.6□□□□□ -0.39
SPG7-216ENST00000567138 STK39Q9UEW8 545 aa12.6□□□□□ -0.39
SPG7-216ENST00000567138 TPRP12270 2363 aaKnown RBP12.59□□□□□ -0.39
SPG7-216ENST00000567138 GPR179Q6PRD1 2367 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 POTEMA6NI47 508 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 F8W810 466 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 PRPF3O43395 683 aaKnown RBP12.59□□□□□ -0.39
SPG7-216ENST00000567138 MAFO75444 373 aaPredicted RBP12.59□□□□□ -0.39
SPG7-216ENST00000567138 PSMD10O75832 226 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 TDP2O95551 362 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 ALDH2P05091 517 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 OR1G1P47890 313 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 GLUD2P49448 558 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 RABEP1Q15276 862 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 UBXN11Q5T124 520 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 ZC3H14Q6PJT7 736 aaKnown RBP12.59□□□□□ -0.39
SPG7-216ENST00000567138 POTEGQ6S5H5 508 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 GLYCTKQ8IVS8 523 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 RDM1Q8NG50 284 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 BICD2Q8TD16 824 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 ZNF707Q96C28 371 aaPredicted RBP12.59□□□□□ -0.39
SPG7-216ENST00000567138 FOXQ1Q9C009 403 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 MINDY3Q9H8M7 445 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 IFT122Q9HBG6 1241 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 ARHGEF3Q9NR81 526 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 BMP2KQ9NSY1 1161 aaPredicted RBP12.59□□□□□ -0.39
SPG7-216ENST00000567138 DLGAP2Q9P1A6 1054 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 CNTNAP2Q9UHC6 1331 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 NID2Q14112 1375 aa12.59□□□□□ -0.39
SPG7-216ENST00000567138 VWA8A3KMH1 1905 aa12.58□□□□□ -0.39
SPG7-216ENST00000567138 LRRN2O75325 713 aa12.58□□□□□ -0.4
SPG7-216ENST00000567138 EVCP57679 992 aa12.58□□□□□ -0.4
SPG7-216ENST00000567138 AKAP17AQ02040 695 aaKnown RBP12.58□□□□□ -0.4
SPG7-216ENST00000567138 PUM1Q14671 1186 aaKnown RBP eCLIP12.58□□□□□ -0.4
SPG7-216ENST00000567138 ELMSAN1Q6PJG2 1045 aa12.58□□□□□ -0.4
SPG7-216ENST00000567138 POTEHQ6S545 545 aa12.58□□□□□ -0.4
SPG7-216ENST00000567138 ANO5Q75V66 913 aa12.58□□□□□ -0.4
SPG7-216ENST00000567138 MRPL10Q7Z7H8 261 aaKnown RBP12.58□□□□□ -0.4
SPG7-216ENST00000567138 CCDC148Q8NFR7 591 aa12.58□□□□□ -0.4
SPG7-216ENST00000567138 TBCKQ8TEA7 893 aa12.58□□□□□ -0.4
SPG7-216ENST00000567138 B3GALT6Q96L58 329 aa12.58□□□□□ -0.4
SPG7-216ENST00000567138 SLC26A6Q9BXS9 759 aa12.58□□□□□ -0.4
SPG7-216ENST00000567138 PIDD1Q9HB75 910 aa12.58□□□□□ -0.4
SPG7-216ENST00000567138 COL4A3BPQ9Y5P4 624 aa12.58□□□□□ -0.4
SPG7-216ENST00000567138 NOTCH4Q99466 2003 aa12.58□□□□□ -0.4
SPG7-216ENST00000567138 EPG5Q9HCE0 2579 aa12.58□□□□□ -0.4
SPG7-216ENST00000567138 SRGAP2CP0DJJ0 459 aa12.57□□□□□ -0.4
SPG7-216ENST00000567138 GLULP15104 373 aa12.57□□□□□ -0.4
SPG7-216ENST00000567138 USP11P51784 963 aa12.57□□□□□ -0.4
SPG7-216ENST00000567138 NPEPPSP55786 919 aa12.57□□□□□ -0.4
SPG7-216ENST00000567138 HTR4Q13639 388 aa12.57□□□□□ -0.4
SPG7-216ENST00000567138 PHLDB3Q6NSJ2 640 aa12.57□□□□□ -0.4
SPG7-216ENST00000567138 DCLRE1AQ6PJP8 1040 aa12.57□□□□□ -0.4
SPG7-216ENST00000567138 B3GNT9Q6UX72 402 aa12.57□□□□□ -0.4
SPG7-216ENST00000567138 PALB2Q86YC2 1186 aa12.57□□□□□ -0.4
SPG7-216ENST00000567138 C1orf210Q8IVY1 113 aa12.57□□□□□ -0.4
SPG7-216ENST00000567138 COLGALT2Q8IYK4 626 aa12.57□□□□□ -0.4
SPG7-216ENST00000567138 RNF168Q8IYW5 571 aaPredicted RBP12.57□□□□□ -0.4
SPG7-216ENST00000567138 RUBCNQ92622 972 aa12.57□□□□□ -0.4
SPG7-216ENST00000567138 TMEM143Q96AN5 459 aa12.57□□□□□ -0.4
SPG7-216ENST00000567138 RHOBTB2Q9BYZ6 727 aa12.57□□□□□ -0.4
SPG7-216ENST00000567138 KANSL3Q9P2N6 904 aa12.57□□□□□ -0.4
SPG7-216ENST00000567138 SSX2IPQ9Y2D8 614 aa12.57□□□□□ -0.4
SPG7-216ENST00000567138 SIT1Q9Y3P8 196 aa12.57□□□□□ -0.4
SPG7-216ENST00000567138 NUMBLQ9Y6R0 609 aa12.57□□□□□ -0.4
SPG7-216ENST00000567138 ITGA4P13612 1032 aa12.56□□□□□ -0.4
SPG7-216ENST00000567138 NCLP19338 710 aaKnown RBP12.56□□□□□ -0.4
SPG7-216ENST00000567138 PDIA3P30101 505 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms