RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 FBXO40Q9UH90 709 aa4.63□□□□□ -1.67
LPCAT2-208ENST00000566915 SUN2Q9UH99 717 aa4.63□□□□□ -1.67
LPCAT2-208ENST00000566915 O00370 1275 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 LRRN2O75325 713 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 CAMTA2O94983 1202 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 HSPA4LO95757 839 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 ATP1A1P05023 1023 aaKnown RBP4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 ELF1P32519 619 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 HSPA13P48723 471 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 PSMD7P51665 324 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 CENPCQ03188 943 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 KLC1Q07866 573 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 SNX1Q13596 522 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 PDE1CQ14123 709 aaPredicted RBP4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 CRYMQ14894 314 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 E2F4Q16254 413 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 BSPRYQ5W0U4 402 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 MTHFD1LQ6UB35 978 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 SESTD1Q86VW0 696 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 TMCO5AQ8N6Q1 288 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 ICA1LQ8NDH6 482 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 CYTH2Q99418 400 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 MED10Q9BTT4 135 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 NACA2Q9H009 215 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 CARD9Q9H257 536 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 BHMT2Q9H2M3 363 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 PLEKHA4Q9H4M7 779 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 SLC38A10Q9HBR0 1119 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 SUCLA2Q9P2R7 463 aaPredicted RBP4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 PPARGC1AQ9UBK2 798 aaKnown RBP4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 ANAPC7Q9UJX3 599 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 FBXL5Q9UKA1 691 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 NOD1Q9Y239 953 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 TTC36A6NLP5 189 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 WDR64B1ANS9 1081 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 CES2O00748 559 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 PSMD3O43242 534 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 ECE2O60344 883 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 TOM1L1O75674 476 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 ACSL3O95573 720 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 EYA4O95677 639 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 P4HBP07237 508 aaKnown RBP4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 TMEM253P0C7T8 217 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 ACADSP16219 412 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 EEF1DP29692 281 aaKnown RBP4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 SLCO1A2P46721 670 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 IRAK1P51617 712 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 UBXN2AP68543 259 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 GRAMD1BQ3KR37 738 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 PRUNE1Q86TP1 453 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 RSPH3Q86UC2 560 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 ZC3H18Q86VM9 953 aaKnown RBP4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 METTL23Q86XA0 190 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 RCOR2Q8IZ40 523 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 DNAAF3Q8N9W5 541 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 XPO6Q96QU8 1125 aaKnown RBP4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 KCNK16Q96T55 309 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 ZBTB18Q99592 522 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 ECT2Q9H8V3 914 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 MTO1Q9Y2Z2 717 aaKnown RBP4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 K7ERI5 159 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 GNGT2O14610 69 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 CLIC2O15247 247 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 TEX33O43247 280 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 HNRNPRO43390 633 aaKnown RBP4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 KLHL2O95198 593 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 LSP1P33241 339 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 COPB2P35606 906 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 INPP1P49441 399 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 VAMP7P51809 220 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 FKBP1BP68106 108 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 ZNF667Q5HYK9 610 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 C1orf146Q5VVC0 180 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 ITPRIPL1Q6GPH6 555 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 NFRKBQ6P4R8 1299 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 CYB5R4Q7L1T6 521 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 DAGLBQ8NCG7 672 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 RASGRP4Q8TDF6 673 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 MTBPQ96DY7 904 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 MAML3Q96JK9 1138 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 RNPC3Q96LT9 517 aaKnown RBP4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 FGD4Q96M96 766 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 AIFM3Q96NN9 605 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 TMEM47Q9BQJ4 181 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 INO80BQ9C086 356 aaPredicted RBP4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 RANBP17Q9H2T7 1088 aaKnown RBP4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 DNAJC17Q9NVM6 304 aaKnown RBP4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 IL1RAPL1Q9NZN1 696 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 PDP2Q9P2J9 529 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 ANKFY1Q9P2R3 1169 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 SEPT9Q9UHD8 586 aaPredicted RBP4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 NEDD4P46934 1319 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 TYW5A2RUC4 315 aaKnown RBP4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 PRKAB2O43741 272 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 PLEKHA8P1O95397 391 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 ATP5BP06576 529 aaKnown RBP4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 PSMA2P25787 234 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 CDC27P30260 824 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 FNTAP49354 379 aa4.62□□□□□ -1.67
LPCAT2-208ENST00000566915 COPS2P61201 443 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms