RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.29■■□□□ 1.16
RNF40-210ENST00000566811 MGEA5O60502 916 aa22.29■■□□□ 1.16
RNF40-210ENST00000566811 ZNF623O75123 536 aa22.29■■□□□ 1.16
RNF40-210ENST00000566811 SMC2O95347 1197 aa22.29■■□□□ 1.16
RNF40-210ENST00000566811 EOMESO95936 686 aa22.29■■□□□ 1.16
RNF40-210ENST00000566811 PIGRP01833 764 aa22.29■■□□□ 1.16
RNF40-210ENST00000566811 LIG1P18858 919 aa22.29■■□□□ 1.16
RNF40-210ENST00000566811 PTMSP20962 102 aa22.29■■□□□ 1.16
RNF40-210ENST00000566811 FAM189BP81408 668 aa22.29■■□□□ 1.16
RNF40-210ENST00000566811 DPYDQ12882 1025 aa22.29■■□□□ 1.16
RNF40-210ENST00000566811 TMEM132AQ24JP5 1023 aa22.29■■□□□ 1.16
RNF40-210ENST00000566811 DCAF4L1Q3SXM0 396 aa22.29■■□□□ 1.16
RNF40-210ENST00000566811 TRIM6Q9C030 488 aaPredicted RBP22.29■■□□□ 1.16
RNF40-210ENST00000566811 BLZF1Q9H2G9 400 aa22.29■■□□□ 1.16
RNF40-210ENST00000566811 LMBRD1Q9NUN5 540 aa22.29■■□□□ 1.16
RNF40-210ENST00000566811 FAM105AQ9NUU6 356 aa22.29■■□□□ 1.16
RNF40-210ENST00000566811 TNFSF13BQ9Y275 285 aa22.29■■□□□ 1.16
RNF40-210ENST00000566811 PPP1R37O75864 691 aa22.28■■□□□ 1.16
RNF40-210ENST00000566811 GJB5O95377 273 aa22.28■■□□□ 1.16
RNF40-210ENST00000566811 GCNT3O95395 438 aa22.28■■□□□ 1.16
RNF40-210ENST00000566811 SMAD3P84022 425 aaKnown RBP22.28■■□□□ 1.16
RNF40-210ENST00000566811 KCNB1Q14721 858 aa22.28■■□□□ 1.16
RNF40-210ENST00000566811 ATF7IP2Q5U623 682 aa22.28■■□□□ 1.16
RNF40-210ENST00000566811 HERC6Q8IVU3 1022 aa22.28■■□□□ 1.16
RNF40-210ENST00000566811 GRAMD1CQ8IYS0 662 aa22.28■■□□□ 1.16
RNF40-210ENST00000566811 PGBD4Q96DM1 585 aa22.28■■□□□ 1.16
RNF40-210ENST00000566811 GSDMAQ96QA5 445 aa22.28■■□□□ 1.16
RNF40-210ENST00000566811 TMEM206Q9H813 350 aa22.28■■□□□ 1.16
RNF40-210ENST00000566811 UBN1Q9NPG3 1134 aa22.28■■□□□ 1.16
RNF40-210ENST00000566811 LRFN2Q9ULH4 789 aa22.28■■□□□ 1.16
RNF40-210ENST00000566811 FNDC1Q4ZHG4 1894 aaPredicted RBP22.28■■□□□ 1.16
RNF40-210ENST00000566811 TOM1L1O75674 476 aa22.27■■□□□ 1.16
RNF40-210ENST00000566811 RHOBTB3O94955 611 aa22.27■■□□□ 1.16
RNF40-210ENST00000566811 KIF20AO95235 890 aa22.27■■□□□ 1.16
RNF40-210ENST00000566811 MBD3O95983 291 aa22.27■■□□□ 1.16
RNF40-210ENST00000566811 RPN1P04843 607 aaKnown RBP22.27■■□□□ 1.16
RNF40-210ENST00000566811 DEFB103AP81534 67 aa22.27■■□□□ 1.16
RNF40-210ENST00000566811 RAB30Q15771 203 aa22.27■■□□□ 1.16
RNF40-210ENST00000566811 RALGAPA2Q2PPJ7 1873 aa22.27■■□□□ 1.16
RNF40-210ENST00000566811 L1TD1Q5T7N2 865 aaKnown RBP22.27■■□□□ 1.16
RNF40-210ENST00000566811 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.27■■□□□ 1.16
RNF40-210ENST00000566811 TAS1R3Q7RTX0 852 aa22.27■■□□□ 1.16
RNF40-210ENST00000566811 RTN4RL1Q86UN2 441 aaPredicted RBP22.27■■□□□ 1.16
RNF40-210ENST00000566811 ACO2Q99798 780 aaKnown RBP22.27■■□□□ 1.16
RNF40-210ENST00000566811 STRA6Q9BX79 667 aa22.27■■□□□ 1.16
RNF40-210ENST00000566811 PCDHB7Q9Y5E2 793 aa22.27■■□□□ 1.16
RNF40-210ENST00000566811 CITO14578 2027 aa22.26■■□□□ 1.15
RNF40-210ENST00000566811 HNRNPDLO14979 420 aaKnown RBP22.26■■□□□ 1.15
RNF40-210ENST00000566811 B4GALT5O43286 388 aa22.26■■□□□ 1.15
RNF40-210ENST00000566811 KLRC4O43908 158 aa22.26■■□□□ 1.15
RNF40-210ENST00000566811 NMT1P30419 496 aaKnown RBP22.26■■□□□ 1.15
RNF40-210ENST00000566811 MPZL3Q6UWV2 235 aa22.26■■□□□ 1.15
RNF40-210ENST00000566811 ECHDC2Q86YB7 292 aa22.26■■□□□ 1.15
RNF40-210ENST00000566811 CRIPAKQ8N1N5 446 aa22.26■■□□□ 1.15
RNF40-210ENST00000566811 BICD1Q96G01 975 aa22.26■■□□□ 1.15
RNF40-210ENST00000566811 ACCSQ96QU6 501 aa22.26■■□□□ 1.15
RNF40-210ENST00000566811 PDZD7Q9H5P4 517 aa22.26■■□□□ 1.15
RNF40-210ENST00000566811 INSL6Q9Y581 213 aa22.26■■□□□ 1.15
RNF40-210ENST00000566811 PCDHA11Q9Y5I1 949 aa22.26■■□□□ 1.15
RNF40-210ENST00000566811 PROZP22891 400 aa22.25■■□□□ 1.15
RNF40-210ENST00000566811 LIG4P49917 911 aa22.25■■□□□ 1.15
RNF40-210ENST00000566811 KYAT1Q16773 422 aa22.25■■□□□ 1.15
RNF40-210ENST00000566811 ZNF697Q5TEC3 545 aa22.25■■□□□ 1.15
RNF40-210ENST00000566811 SPATA20Q8TB22 786 aa22.25■■□□□ 1.15
RNF40-210ENST00000566811 CPB2Q96IY4 423 aa22.25■■□□□ 1.15
RNF40-210ENST00000566811 ZBED2Q9BTP6 218 aa22.25■■□□□ 1.15
RNF40-210ENST00000566811 PCDHB2Q9Y5E7 798 aa22.25■■□□□ 1.15
RNF40-210ENST00000566811 PRR29P0C7W0 189 aa22.24■■□□□ 1.15
RNF40-210ENST00000566811 MCF2P10911 925 aa22.24■■□□□ 1.15
RNF40-210ENST00000566811 SNRPFP62306 86 aaKnown RBP22.24■■□□□ 1.15
RNF40-210ENST00000566811 HTRA4P83105 476 aaPredicted RBP22.24■■□□□ 1.15
RNF40-210ENST00000566811 HSP90AA2PQ14568 343 aaPredicted RBP22.24■■□□□ 1.15
RNF40-210ENST00000566811 NOLC1Q14978 699 aaKnown RBP eCLIP22.24■■□□□ 1.15
RNF40-210ENST00000566811 BMT2Q1RMZ1 405 aa22.24■■□□□ 1.15
RNF40-210ENST00000566811 ZNF568Q3ZCX4 644 aa22.24■■□□□ 1.15
RNF40-210ENST00000566811 KMT5BQ4FZB7 885 aa22.24■■□□□ 1.15
RNF40-210ENST00000566811 UBXN11Q5T124 520 aa22.24■■□□□ 1.15
RNF40-210ENST00000566811 NT5DC1Q5TFE4 455 aa22.24■■□□□ 1.15
RNF40-210ENST00000566811 SLFN12LQ6IEE8 588 aa22.24■■□□□ 1.15
RNF40-210ENST00000566811 MRPL10Q7Z7H8 261 aaKnown RBP22.24■■□□□ 1.15
RNF40-210ENST00000566811 ZNF598Q86UK7 904 aaKnown RBP22.24■■□□□ 1.15
RNF40-210ENST00000566811 SMARCE1Q969G3 411 aa22.24■■□□□ 1.15
RNF40-210ENST00000566811 RAD9AQ99638 391 aa22.24■■□□□ 1.15
RNF40-210ENST00000566811 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.23■■□□□ 1.15
RNF40-210ENST00000566811 CARNS1A5YM72 827 aa22.23■■□□□ 1.15
RNF40-210ENST00000566811 CLDN3O15551 220 aa22.23■■□□□ 1.15
RNF40-210ENST00000566811 TLL1O43897 1013 aa22.23■■□□□ 1.15
RNF40-210ENST00000566811 CASP1P29466 404 aa22.23■■□□□ 1.15
RNF40-210ENST00000566811 PNOCQ13519 176 aa22.23■■□□□ 1.15
RNF40-210ENST00000566811 EPM2AIP1Q7L775 607 aaPredicted RBP22.23■■□□□ 1.15
RNF40-210ENST00000566811 ABI1Q8IZP0 508 aa22.23■■□□□ 1.15
RNF40-210ENST00000566811 YME1L1Q96TA2 773 aa22.23■■□□□ 1.15
RNF40-210ENST00000566811 CDX2Q99626 313 aaPredicted RBP22.23■■□□□ 1.15
RNF40-210ENST00000566811 TARS2Q9BW92 718 aaKnown RBP22.23■■□□□ 1.15
RNF40-210ENST00000566811 PTPRHQ9HD43 1115 aa22.23■■□□□ 1.15
RNF40-210ENST00000566811 TBC1D7Q9P0N9 293 aa22.23■■□□□ 1.15
RNF40-210ENST00000566811 CGNQ9P2M7 1197 aaKnown RBP22.23■■□□□ 1.15
RNF40-210ENST00000566811 MSRAQ9UJ68 235 aa22.23■■□□□ 1.15
RNF40-210ENST00000566811 NLRC5Q86WI3 1866 aa22.23■■□□□ 1.15
RNF40-210ENST00000566811 TDRD15B5MCY1 1934 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms