RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 RWDD3Q9Y3V2 267 aa23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 ZMYM2Q9UBW7 1377 aa23.16■■□□□ 1.3
SHCBP1-205ENST00000566016 ACTN4O43707 911 aaKnown RBP23.16■■□□□ 1.3
SHCBP1-205ENST00000566016 LINC00271P0C7V0 271 aa23.16■■□□□ 1.3
SHCBP1-205ENST00000566016 SYKP43405 635 aa23.16■■□□□ 1.3
SHCBP1-205ENST00000566016 STRN3Q13033 797 aa23.16■■□□□ 1.3
SHCBP1-205ENST00000566016 ATF7IP2Q5U623 682 aa23.16■■□□□ 1.3
SHCBP1-205ENST00000566016 Q7L0L9 218 aa23.16■■□□□ 1.3
SHCBP1-205ENST00000566016 ABI1Q8IZP0 508 aa23.16■■□□□ 1.3
SHCBP1-205ENST00000566016 C7orf25Q9BPX7 421 aa23.16■■□□□ 1.3
SHCBP1-205ENST00000566016 ADPGKQ9BRR6 497 aa23.16■■□□□ 1.3
SHCBP1-205ENST00000566016 EIF2AQ9BY44 585 aaKnown RBP23.16■■□□□ 1.3
SHCBP1-205ENST00000566016 TRIM6Q9C030 488 aaPredicted RBP23.16■■□□□ 1.3
SHCBP1-205ENST00000566016 ZHX3Q9H4I2 956 aa23.16■■□□□ 1.3
SHCBP1-205ENST00000566016 MTMR10Q9NXD2 777 aa23.16■■□□□ 1.3
SHCBP1-205ENST00000566016 TNFSF13BQ9Y275 285 aa23.16■■□□□ 1.3
SHCBP1-205ENST00000566016 IPPQ9Y573 584 aa23.16■■□□□ 1.3
SHCBP1-205ENST00000566016 TDRD15B5MCY1 1934 aaKnown RBP23.15■■□□□ 1.3
SHCBP1-205ENST00000566016 K7ENM7 598 aa23.15■■□□□ 1.3
SHCBP1-205ENST00000566016 IBSPP21815 317 aaPredicted RBP23.15■■□□□ 1.3
SHCBP1-205ENST00000566016 NDUFA8P51970 172 aa23.15■■□□□ 1.3
SHCBP1-205ENST00000566016 DCAF4L1Q3SXM0 396 aa23.15■■□□□ 1.3
SHCBP1-205ENST00000566016 CLLU1OSQ5K130 101 aa23.15■■□□□ 1.3
SHCBP1-205ENST00000566016 NT5DC1Q5TFE4 455 aa23.15■■□□□ 1.3
SHCBP1-205ENST00000566016 ZPBP2Q6X784 338 aa23.15■■□□□ 1.3
SHCBP1-205ENST00000566016 APBB1IPQ7Z5R6 666 aaPredicted RBP23.15■■□□□ 1.3
SHCBP1-205ENST00000566016 SFR1Q86XK3 245 aa23.15■■□□□ 1.3
SHCBP1-205ENST00000566016 HACE1Q8IYU2 909 aa23.15■■□□□ 1.3
SHCBP1-205ENST00000566016 FSIP1Q8NA03 581 aa23.15■■□□□ 1.3
SHCBP1-205ENST00000566016 RNF169Q8NCN4 708 aa23.15■■□□□ 1.3
SHCBP1-205ENST00000566016 SMG8Q8ND04 991 aaKnown RBP23.15■■□□□ 1.3
SHCBP1-205ENST00000566016 ACO2Q99798 780 aaKnown RBP23.15■■□□□ 1.3
SHCBP1-205ENST00000566016 UBN1Q9NPG3 1134 aa23.15■■□□□ 1.3
SHCBP1-205ENST00000566016 CITO14578 2027 aa23.15■■□□□ 1.3
SHCBP1-205ENST00000566016 MYL1P05976 194 aa23.14■■□□□ 1.29
SHCBP1-205ENST00000566016 LIG1P18858 919 aa23.14■■□□□ 1.29
SHCBP1-205ENST00000566016 GTF2BQ00403 316 aa23.14■■□□□ 1.29
SHCBP1-205ENST00000566016 TMEM132AQ24JP5 1023 aa23.14■■□□□ 1.29
SHCBP1-205ENST00000566016 GLB1LQ6UWU2 654 aa23.14■■□□□ 1.29
SHCBP1-205ENST00000566016 CCDC65Q8IXS2 484 aa23.14■■□□□ 1.29
SHCBP1-205ENST00000566016 LRRC43Q8N309 656 aa23.14■■□□□ 1.29
SHCBP1-205ENST00000566016 HVCN1Q96D96 273 aa23.14■■□□□ 1.29
SHCBP1-205ENST00000566016 CASD1Q96PB1 797 aa23.14■■□□□ 1.29
SHCBP1-205ENST00000566016 MRPL9Q9BYD2 267 aaKnown RBP23.14■■□□□ 1.29
SHCBP1-205ENST00000566016 GOLGA6L4A6NEF3 574 aa23.13■■□□□ 1.29
SHCBP1-205ENST00000566016 TBKBP1A7MCY6 615 aa23.13■■□□□ 1.29
SHCBP1-205ENST00000566016 INPPL1O15357 1258 aa23.13■■□□□ 1.29
SHCBP1-205ENST00000566016 IDEP14735 1019 aa23.13■■□□□ 1.29
SHCBP1-205ENST00000566016 PROZP22891 400 aa23.13■■□□□ 1.29
SHCBP1-205ENST00000566016 GATMP50440 423 aa23.13■■□□□ 1.29
SHCBP1-205ENST00000566016 AGMOQ6ZNB7 445 aa23.13■■□□□ 1.29
SHCBP1-205ENST00000566016 TMEM87AQ8NBN3 555 aa23.13■■□□□ 1.29
SHCBP1-205ENST00000566016 STAMQ92783 540 aa23.13■■□□□ 1.29
SHCBP1-205ENST00000566016 GOLPH3LQ9H4A5 285 aa23.13■■□□□ 1.29
SHCBP1-205ENST00000566016 PTPRHQ9HD43 1115 aa23.13■■□□□ 1.29
SHCBP1-205ENST00000566016 PANK4Q9NVE7 773 aa23.13■■□□□ 1.29
SHCBP1-205ENST00000566016 SERTAD1Q9UHV2 236 aa23.13■■□□□ 1.29
SHCBP1-205ENST00000566016 TBX20Q9UMR3 447 aa23.13■■□□□ 1.29
SHCBP1-205ENST00000566016 MRPL42Q9Y6G3 142 aaKnown RBP23.13■■□□□ 1.29
SHCBP1-205ENST00000566016 TRIP11Q15643 1979 aa23.13■■□□□ 1.29
SHCBP1-205ENST00000566016 C5orf67F2Z3F1 127 aa23.12■■□□□ 1.29
SHCBP1-205ENST00000566016 PPP1R37O75864 691 aa23.12■■□□□ 1.29
SHCBP1-205ENST00000566016 NPTXRO95502 500 aa23.12■■□□□ 1.29
SHCBP1-205ENST00000566016 PIGRP01833 764 aa23.12■■□□□ 1.29
SHCBP1-205ENST00000566016 ALCAMQ13740 583 aa23.12■■□□□ 1.29
SHCBP1-205ENST00000566016 GRIN2CQ14957 1233 aa23.12■■□□□ 1.29
SHCBP1-205ENST00000566016 LONRF3Q496Y0 759 aa23.12■■□□□ 1.29
SHCBP1-205ENST00000566016 PAN2Q504Q3 1202 aaKnown RBP23.12■■□□□ 1.29
SHCBP1-205ENST00000566016 ZNF720Q7Z2F6 126 aa23.12■■□□□ 1.29
SHCBP1-205ENST00000566016 CDR2LQ86X02 465 aaPredicted RBP23.12■■□□□ 1.29
SHCBP1-205ENST00000566016 MAP4K3Q8IVH8 894 aa23.12■■□□□ 1.29
SHCBP1-205ENST00000566016 LPPQ93052 612 aa23.12■■□□□ 1.29
SHCBP1-205ENST00000566016 TARS2Q9BW92 718 aaKnown RBP23.12■■□□□ 1.29
SHCBP1-205ENST00000566016 NXF3Q9H4D5 531 aaKnown RBP23.12■■□□□ 1.29
SHCBP1-205ENST00000566016 RSAD1Q9HA92 442 aa23.12■■□□□ 1.29
SHCBP1-205ENST00000566016 MEIS3P2A8K0S8 358 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 TOM1L1O75674 476 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 ITGA4P13612 1032 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 ASIC1P78348 528 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 HERC4Q5GLZ8 1057 aaPredicted RBP23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 EEF1DP3Q658K8 133 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 SPRED2Q7Z698 418 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 HELQQ8TDG4 1101 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 FAM161BQ96MY7 647 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 GUCD1Q96NT3 240 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 C17orf80Q9BSJ5 609 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 STRA6Q9BX79 667 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 MRPL44Q9H9J2 332 aaKnown RBP23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 USP20Q9Y2K6 914 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 GIT1Q9Y2X7 761 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 ABLIM1O14639 778 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 OFD1O75665 1012 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 RB1P06400 928 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 NMT1P30419 496 aaKnown RBP23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 COASYQ13057 564 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 EPC2Q52LR7 807 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 MPZL3Q6UWV2 235 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 UNC13DQ70J99 1090 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 TMEM192Q8IY95 271 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 PAGE5Q96GU1 130 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms