RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 TBX10O75333 385 aa18.49■□□□□ 0.55
USB1-211ENST00000565662 ALDH2P05091 517 aa18.49■□□□□ 0.55
USB1-211ENST00000565662 ARF4P18085 180 aaPredicted RBP18.49■□□□□ 0.55
USB1-211ENST00000565662 SSTR3P32745 418 aaPredicted RBP18.49■□□□□ 0.55
USB1-211ENST00000565662 ABCD1P33897 745 aa18.49■□□□□ 0.55
USB1-211ENST00000565662 LTBRP36941 435 aa18.49■□□□□ 0.55
USB1-211ENST00000565662 TOB1P50616 345 aaPredicted RBP18.49■□□□□ 0.55
USB1-211ENST00000565662 DMP1Q13316 513 aaPredicted RBP18.49■□□□□ 0.55
USB1-211ENST00000565662 CUL4AQ13619 759 aa18.49■□□□□ 0.55
USB1-211ENST00000565662 AMHR2Q16671 573 aa18.49■□□□□ 0.55
USB1-211ENST00000565662 TMEM132AQ24JP5 1023 aa18.49■□□□□ 0.55
USB1-211ENST00000565662 UBXN11Q5T124 520 aa18.49■□□□□ 0.55
USB1-211ENST00000565662 GPR65Q8IYL9 337 aa18.49■□□□□ 0.55
USB1-211ENST00000565662 INTS4Q96HW7 963 aaKnown RBP18.49■□□□□ 0.55
USB1-211ENST00000565662 FZD8Q9H461 694 aa18.49■□□□□ 0.55
USB1-211ENST00000565662 NRDE2Q9H7Z3 1164 aa18.49■□□□□ 0.55
USB1-211ENST00000565662 DDX19AQ9NUU7 478 aaKnown RBP18.49■□□□□ 0.55
USB1-211ENST00000565662 RBM19Q9Y4C8 960 aaKnown RBP18.49■□□□□ 0.55
USB1-211ENST00000565662 H0YCG3 227 aa18.48■□□□□ 0.55
USB1-211ENST00000565662 GALTP07902 379 aa18.48■□□□□ 0.55
USB1-211ENST00000565662 CTSAP10619 480 aa18.48■□□□□ 0.55
USB1-211ENST00000565662 IL9P15248 144 aa18.48■□□□□ 0.55
USB1-211ENST00000565662 GRIK3Q13003 919 aa18.48■□□□□ 0.55
USB1-211ENST00000565662 PRPF4BQ13523 1007 aaKnown RBP18.48■□□□□ 0.55
USB1-211ENST00000565662 HYIQ5T013 277 aa18.48■□□□□ 0.55
USB1-211ENST00000565662 MRPL43Q8N983 215 aaKnown RBP18.48■□□□□ 0.55
USB1-211ENST00000565662 LPPQ93052 612 aa18.48■□□□□ 0.55
USB1-211ENST00000565662 EMILIN2Q9BXX0 1053 aa18.48■□□□□ 0.55
USB1-211ENST00000565662 FAN1Q9Y2M0 1017 aa18.48■□□□□ 0.55
USB1-211ENST00000565662 MUC3AQ02505 3323 aa18.48■□□□□ 0.55
USB1-211ENST00000565662 ACKR2O00590 384 aa18.47■□□□□ 0.55
USB1-211ENST00000565662 C1RP00736 705 aa18.47■□□□□ 0.55
USB1-211ENST00000565662 PRKCBP05771 671 aa18.47■□□□□ 0.55
USB1-211ENST00000565662 ERVFC1P60507 584 aa18.47■□□□□ 0.55
USB1-211ENST00000565662 CREMQ03060 361 aa18.47■□□□□ 0.55
USB1-211ENST00000565662 ITIH3Q06033 890 aa18.47■□□□□ 0.55
USB1-211ENST00000565662 ADGRD2Q7Z7M1 963 aa18.47■□□□□ 0.55
USB1-211ENST00000565662 VPS52Q8N1B4 723 aa18.47■□□□□ 0.55
USB1-211ENST00000565662 NECTIN4Q96NY8 510 aa18.47■□□□□ 0.55
USB1-211ENST00000565662 ZBP1Q9H171 429 aa18.47■□□□□ 0.55
USB1-211ENST00000565662 HCSTQ9UBK5 93 aa18.47■□□□□ 0.55
USB1-211ENST00000565662 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.47■□□□□ 0.55
USB1-211ENST00000565662 ARL5CA6NH57 179 aa18.46■□□□□ 0.55
USB1-211ENST00000565662 CSPG5O95196 566 aa18.46■□□□□ 0.55
USB1-211ENST00000565662 ZP2Q05996 745 aa18.46■□□□□ 0.55
USB1-211ENST00000565662 NBR1Q14596 966 aa18.46■□□□□ 0.55
USB1-211ENST00000565662 RBM23Q86U06 439 aaKnown RBP18.46■□□□□ 0.55
USB1-211ENST00000565662 SMG8Q8ND04 991 aaKnown RBP18.46■□□□□ 0.55
USB1-211ENST00000565662 CALML4Q96GE6 196 aa18.46■□□□□ 0.55
USB1-211ENST00000565662 CPB2Q96IY4 423 aa18.46■□□□□ 0.55
USB1-211ENST00000565662 BACH2Q9BYV9 841 aa18.46■□□□□ 0.55
USB1-211ENST00000565662 BDP1A6H8Y1 2624 aa18.46■□□□□ 0.55
USB1-211ENST00000565662 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.45■□□□□ 0.54
USB1-211ENST00000565662 C2orf71A6NGG8 1288 aa18.45■□□□□ 0.54
USB1-211ENST00000565662 C19orf67A6NJJ6 358 aa18.45■□□□□ 0.54
USB1-211ENST00000565662 URODP06132 367 aa18.45■□□□□ 0.54
USB1-211ENST00000565662 GUCY2CP25092 1073 aa18.45■□□□□ 0.54
USB1-211ENST00000565662 LONP1P36776 959 aaKnown RBP18.45■□□□□ 0.54
USB1-211ENST00000565662 MLH1P40692 756 aa18.45■□□□□ 0.54
USB1-211ENST00000565662 SMTNP53814 917 aa18.45■□□□□ 0.54
USB1-211ENST00000565662 CES5AQ6NT32 575 aa18.45■□□□□ 0.54
USB1-211ENST00000565662 MAEAQ7L5Y9 396 aa18.45■□□□□ 0.54
USB1-211ENST00000565662 COLEC11Q9BWP8 271 aa18.45■□□□□ 0.54
USB1-211ENST00000565662 EIF2AQ9BY44 585 aaKnown RBP18.45■□□□□ 0.54
USB1-211ENST00000565662 GBP3Q9H0R5 595 aa18.45■□□□□ 0.54
USB1-211ENST00000565662 TMEM134Q9H6X4 195 aa18.45■□□□□ 0.54
USB1-211ENST00000565662 GPRC5CQ9NQ84 441 aa18.45■□□□□ 0.54
USB1-211ENST00000565662 K7ERI5 159 aa18.44■□□□□ 0.54
USB1-211ENST00000565662 CD2BP2O95400 341 aaKnown RBP18.44■□□□□ 0.54
USB1-211ENST00000565662 NPTXRO95502 500 aa18.44■□□□□ 0.54
USB1-211ENST00000565662 GLP2RO95838 553 aa18.44■□□□□ 0.54
USB1-211ENST00000565662 SOD2P04179 222 aa18.44■□□□□ 0.54
USB1-211ENST00000565662 CA8P35219 290 aa18.44■□□□□ 0.54
USB1-211ENST00000565662 PBX3P40426 434 aa18.44■□□□□ 0.54
USB1-211ENST00000565662 UBA7P41226 1012 aa18.44■□□□□ 0.54
USB1-211ENST00000565662 SLC11A1P49279 550 aa18.44■□□□□ 0.54
USB1-211ENST00000565662 DSC1Q08554 894 aa18.44■□□□□ 0.54
USB1-211ENST00000565662 KCNC3Q14003 757 aa18.44■□□□□ 0.54
USB1-211ENST00000565662 ANKRD54Q6NXT1 300 aa18.44■□□□□ 0.54
USB1-211ENST00000565662 NECAB3Q96P71 396 aaPredicted RBP18.44■□□□□ 0.54
USB1-211ENST00000565662 PHF7Q9BWX1 381 aaPredicted RBP18.44■□□□□ 0.54
USB1-211ENST00000565662 CCDC113Q9H0I3 377 aa18.44■□□□□ 0.54
USB1-211ENST00000565662 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.44■□□□□ 0.54
USB1-211ENST00000565662 MRPL17Q9NRX2 175 aaKnown RBP18.44■□□□□ 0.54
USB1-211ENST00000565662 TOPORSQ9NS56 1045 aaPredicted RBP18.44■□□□□ 0.54
USB1-211ENST00000565662 CLEC1BQ9P126 229 aa18.44■□□□□ 0.54
USB1-211ENST00000565662 VWA3AA6NCI4 1184 aa18.43■□□□□ 0.54
USB1-211ENST00000565662 PI4K2BG5E9Z4 385 aa18.43■□□□□ 0.54
USB1-211ENST00000565662 LINC01565O15544 149 aa18.43■□□□□ 0.54
USB1-211ENST00000565662 CXCL14O95715 111 aa18.43■□□□□ 0.54
USB1-211ENST00000565662 POMCP01189 267 aa18.43■□□□□ 0.54
USB1-211ENST00000565662 GTF2F1P35269 517 aaKnown RBP eCLIP18.43■□□□□ 0.54
USB1-211ENST00000565662 DLX2Q07687 328 aaPredicted RBP18.43■□□□□ 0.54
USB1-211ENST00000565662 ELAVL2Q12926 359 aaKnown RBP18.43■□□□□ 0.54
USB1-211ENST00000565662 PDXDC1Q6P996 788 aa18.43■□□□□ 0.54
USB1-211ENST00000565662 COLGALT2Q8IYK4 626 aa18.43■□□□□ 0.54
USB1-211ENST00000565662 RIPOR3Q96MK2 946 aa18.43■□□□□ 0.54
USB1-211ENST00000565662 GAD1Q99259 594 aa18.43■□□□□ 0.54
USB1-211ENST00000565662 HERC2P3Q9BVR0 1158 aa18.43■□□□□ 0.54
USB1-211ENST00000565662 MRPL4Q9BYD3 311 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms