RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 ENKD1Q9H0I2 346 aa5.98□□□□□ -1.45
CHD9-214ENST00000565119 ZSWIM4Q9H7M6 989 aa5.98□□□□□ -1.45
CHD9-214ENST00000565119 RPS6KL1Q9Y6S9 549 aa5.98□□□□□ -1.45
CHD9-214ENST00000565119 TRBV23-1A0A0A0MS06 115 aa5.97□□□□□ -1.45
CHD9-214ENST00000565119 SLC12A8A0AV02 714 aa5.97□□□□□ -1.45
CHD9-214ENST00000565119 DAPK3O43293 454 aa5.97□□□□□ -1.45
CHD9-214ENST00000565119 MTSS1O43312 755 aa5.97□□□□□ -1.45
CHD9-214ENST00000565119 NHLH1Q02575 133 aa5.97□□□□□ -1.45
CHD9-214ENST00000565119 FOXD4Q12950 439 aaPredicted RBP5.97□□□□□ -1.45
CHD9-214ENST00000565119 OVCH1Q7RTY7 1134 aa5.97□□□□□ -1.45
CHD9-214ENST00000565119 SENP7Q9BQF6 1050 aa5.97□□□□□ -1.45
CHD9-214ENST00000565119 PDCD2LQ9BRP1 358 aa5.97□□□□□ -1.45
CHD9-214ENST00000565119 GEMIN8Q9NWZ8 242 aaKnown RBP5.97□□□□□ -1.45
CHD9-214ENST00000565119 GABBR1Q9UBS5 961 aa5.97□□□□□ -1.45
CHD9-214ENST00000565119 GAGE12BA1L429 117 aa5.96□□□□□ -1.46
CHD9-214ENST00000565119 GAGE12HA6NDE8 117 aa5.96□□□□□ -1.46
CHD9-214ENST00000565119 BMPR1AP36894 532 aa5.96□□□□□ -1.46
CHD9-214ENST00000565119 RHBDL3P58872 404 aa5.96□□□□□ -1.46
CHD9-214ENST00000565119 GABREP78334 506 aa5.96□□□□□ -1.46
CHD9-214ENST00000565119 SLFN12LQ6IEE8 588 aa5.96□□□□□ -1.46
CHD9-214ENST00000565119 FAM43BQ6ZT52 329 aaPredicted RBP5.96□□□□□ -1.46
CHD9-214ENST00000565119 ANKS3Q6ZW76 656 aa5.96□□□□□ -1.46
CHD9-214ENST00000565119 BMP8AQ7Z5Y6 402 aa5.96□□□□□ -1.46
CHD9-214ENST00000565119 CDC6Q99741 560 aa5.96□□□□□ -1.46
CHD9-214ENST00000565119 LSM14BQ9BX40 385 aaKnown RBP5.96□□□□□ -1.46
CHD9-214ENST00000565119 TEX101Q9BY14 249 aa5.96□□□□□ -1.46
CHD9-214ENST00000565119 OSBPL2Q9H1P3 480 aa5.96□□□□□ -1.46
CHD9-214ENST00000565119 TMX1Q9H3N1 280 aa5.96□□□□□ -1.46
CHD9-214ENST00000565119 GNL3LQ9NVN8 582 aaKnown RBP5.96□□□□□ -1.46
CHD9-214ENST00000565119 DDX56Q9NY93 547 aaKnown RBP5.96□□□□□ -1.46
CHD9-214ENST00000565119 TLK1Q9UKI8 766 aa5.96□□□□□ -1.46
CHD9-214ENST00000565119 COMMD10Q9Y6G5 202 aa5.96□□□□□ -1.46
CHD9-214ENST00000565119 UNC119BA6NIH7 251 aa5.95□□□□□ -1.46
CHD9-214ENST00000565119 LEFTY2O00292 366 aa5.95□□□□□ -1.46
CHD9-214ENST00000565119 ENPP3O14638 875 aa5.95□□□□□ -1.46
CHD9-214ENST00000565119 KLF4O43474 513 aa5.95□□□□□ -1.46
CHD9-214ENST00000565119 DNAJC6O75061 913 aa5.95□□□□□ -1.46
CHD9-214ENST00000565119 HIP1RO75146 1068 aa5.95□□□□□ -1.46
CHD9-214ENST00000565119 ESRRBO95718 433 aa5.95□□□□□ -1.46
CHD9-214ENST00000565119 S100BP04271 92 aaPredicted RBP5.95□□□□□ -1.46
CHD9-214ENST00000565119 MPLP40238 635 aa5.95□□□□□ -1.46
CHD9-214ENST00000565119 GNL2Q13823 731 aaKnown RBP5.95□□□□□ -1.46
CHD9-214ENST00000565119 GLB1L3Q8NCI6 653 aaPredicted RBP5.95□□□□□ -1.46
CHD9-214ENST00000565119 CPEB3Q8NE35 698 aaKnown RBP5.95□□□□□ -1.46
CHD9-214ENST00000565119 E2F7Q96AV8 911 aa5.95□□□□□ -1.46
CHD9-214ENST00000565119 MAML3Q96JK9 1138 aa5.95□□□□□ -1.46
CHD9-214ENST00000565119 ZNF778Q96MU6 729 aa5.95□□□□□ -1.46
CHD9-214ENST00000565119 C1QTNF7Q9BXJ2 289 aa5.95□□□□□ -1.46
CHD9-214ENST00000565119 CELF4Q9BZC1 486 aaKnown RBP5.95□□□□□ -1.46
CHD9-214ENST00000565119 PNMA2Q9UL42 364 aa5.95□□□□□ -1.46
CHD9-214ENST00000565119 ZBTB48P10074 688 aaPredicted RBP5.94□□□□□ -1.46
CHD9-214ENST00000565119 ZNF81P51508 661 aa5.94□□□□□ -1.46
CHD9-214ENST00000565119 IRF9Q00978 393 aa5.94□□□□□ -1.46
CHD9-214ENST00000565119 GUCY1B3Q02153 619 aa5.94□□□□□ -1.46
CHD9-214ENST00000565119 BIRC2Q13490 618 aa5.94□□□□□ -1.46
CHD9-214ENST00000565119 CC2D1AQ6P1N0 951 aaPredicted RBP5.94□□□□□ -1.46
CHD9-214ENST00000565119 SPATC1Q76KD6 591 aa5.94□□□□□ -1.46
CHD9-214ENST00000565119 C11orf96Q7Z7L8 435 aa5.94□□□□□ -1.46
CHD9-214ENST00000565119 FAM9BQ8IZU0 186 aa5.94□□□□□ -1.46
CHD9-214ENST00000565119 ZNF384Q8TF68 577 aa5.94□□□□□ -1.46
CHD9-214ENST00000565119 ASB10Q8WXI3 467 aa5.94□□□□□ -1.46
CHD9-214ENST00000565119 RPS6KC1Q96S38 1066 aa5.94□□□□□ -1.46
CHD9-214ENST00000565119 DCLRE1CQ96SD1 692 aaKnown RBP5.94□□□□□ -1.46
CHD9-214ENST00000565119 KRTAP2-2Q9BYT5 123 aa5.94□□□□□ -1.46
CHD9-214ENST00000565119 TYW1Q9NV66 732 aaKnown RBP5.94□□□□□ -1.46
CHD9-214ENST00000565119 IFT57Q9NWB7 429 aa5.94□□□□□ -1.46
CHD9-214ENST00000565119 SALL3Q9BXA9 1300 aa5.94□□□□□ -1.46
CHD9-214ENST00000565119 PRC1O43663 620 aa5.93□□□□□ -1.46
CHD9-214ENST00000565119 C1QL1O75973 258 aa5.93□□□□□ -1.46
CHD9-214ENST00000565119 POU3F3P20264 500 aaPredicted RBP5.93□□□□□ -1.46
CHD9-214ENST00000565119 TP53BP2Q13625 1128 aa5.93□□□□□ -1.46
CHD9-214ENST00000565119 BMS1Q14692 1282 aaKnown RBP5.93□□□□□ -1.46
CHD9-214ENST00000565119 WDR78Q5VTH9 848 aa5.93□□□□□ -1.46
CHD9-214ENST00000565119 FAM83AQ86UY5 434 aa5.93□□□□□ -1.46
CHD9-214ENST00000565119 PMFBP1Q8TBY8 1022 aa5.93□□□□□ -1.46
CHD9-214ENST00000565119 CAGE1Q8TC20 777 aa5.93□□□□□ -1.46
CHD9-214ENST00000565119 STAG1Q8WVM7 1258 aa5.93□□□□□ -1.46
CHD9-214ENST00000565119 ZNF669Q96BR6 464 aaPredicted RBP5.93□□□□□ -1.46
CHD9-214ENST00000565119 ADAM2Q99965 735 aa5.93□□□□□ -1.46
CHD9-214ENST00000565119 EPC1Q9H2F5 836 aa5.93□□□□□ -1.46
CHD9-214ENST00000565119 ING3Q9NXR8 418 aa5.93□□□□□ -1.46
CHD9-214ENST00000565119 ONECUT2O95948 504 aa5.92□□□□□ -1.46
CHD9-214ENST00000565119 ZSCAN20P17040 1043 aaPredicted RBP5.92□□□□□ -1.46
CHD9-214ENST00000565119 RNASE9P60153 205 aaKnown RBP5.92□□□□□ -1.46
CHD9-214ENST00000565119 MYBPC2Q14324 1141 aa5.92□□□□□ -1.46
CHD9-214ENST00000565119 NFE2L2Q16236 605 aa5.92□□□□□ -1.46
CHD9-214ENST00000565119 ABHD17BQ5VST6 288 aa5.92□□□□□ -1.46
CHD9-214ENST00000565119 MCF2L2Q86YR7 1114 aa5.92□□□□□ -1.46
CHD9-214ENST00000565119 SPC25Q9HBM1 224 aa5.92□□□□□ -1.46
CHD9-214ENST00000565119 PRKAB1Q9Y478 270 aa5.92□□□□□ -1.46
CHD9-214ENST00000565119 MRPL42Q9Y6G3 142 aaKnown RBP5.92□□□□□ -1.46
CHD9-214ENST00000565119 LRRC3CA6NJW4 275 aa5.91□□□□□ -1.46
CHD9-214ENST00000565119 VIL1P09327 827 aaKnown RBP5.91□□□□□ -1.46
CHD9-214ENST00000565119 EGR2P11161 476 aaPredicted RBP5.91□□□□□ -1.46
CHD9-214ENST00000565119 FNTBP49356 437 aa5.91□□□□□ -1.46
CHD9-214ENST00000565119 MPP3Q13368 585 aa5.91□□□□□ -1.46
CHD9-214ENST00000565119 OS9Q13438 667 aaPredicted RBP5.91□□□□□ -1.46
CHD9-214ENST00000565119 CCSAPQ6IQ19 270 aaPredicted RBP5.91□□□□□ -1.46
CHD9-214ENST00000565119 PLXDC1Q8IUK5 500 aa5.91□□□□□ -1.46
CHD9-214ENST00000565119 AMOTL1Q8IY63 956 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms