RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	CETN3	O15182	167 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	TLR3	O15455	904 aa	Known RBP	10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	TOM1L1	O75674	476 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	FGFR1OP	O95684	399 aa	Known RBP	10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	CTSH	P09668	335 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	CKB	P12277	381 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	RPL13	P26373	211 aa	Known RBP	10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	LIG4	P49917	911 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	MARS	P56192	900 aa	Known RBP	10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	TPM4	P67936	248 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	BFSP2	Q13515	415 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	PRPF4B	Q13523	1007 aa	Known RBP	10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	TRIM60	Q495X7	471 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	FBXO47	Q5MNV8	452 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	SLFN12L	Q6IEE8	588 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	IRF2BP1	Q8IU81	584 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	DPF3	Q92784	378 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	CCDC51	Q96ER9	411 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	BICD1	Q96G01	975 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	FBXL18	Q96ME1	805 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	CBWD1	Q9BRT8	395 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	TARS2	Q9BW92	718 aa	Known RBP	10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	SRRT	Q9BXP5	876 aa	Known RBP	10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	AGPAT5	Q9NUQ2	364 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	FANCL	Q9NW38	375 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	TBX21	Q9UL17	535 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	TNFSF13B	Q9Y275	285 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778	NR2E3	Q9Y5X4	410 aa		10.77	□□□□□ -0.69
SIN3A-205	ENST00000564778		A0A0B4J269	797 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778		A0A1B0GUA9	196 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	DCDC2C	A8MYV0	355 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	MAPK13	O15264	365 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	B4GALT5	O43286	388 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	FAM189A1	O60320	539 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	PQBP1	O60828	265 aa	Known RBP	10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	CSDE1	O75534	798 aa	Known RBP	10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	ERLIN2	O94905	339 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	GNA14	O95837	355 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	SELP	P16109	830 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	ARF4	P18085	180 aa	Predicted RBP	10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	EEF1G	P26641	437 aa	Known RBP	10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	AXL	P30530	894 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	ATN1	P54259	1190 aa	Predicted RBP	10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	MCCD1	P59942	119 aa	Predicted RBP	10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	TLE2	Q04725	743 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	ENPEP	Q07075	957 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	SPAG1	Q07617	926 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	MCL1	Q07820	350 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	FAAP100	Q0VG06	881 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	ADAM9	Q13443	819 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	HSP90AA2P	Q14568	343 aa	Predicted RBP	10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	NOLC1	Q14978	699 aa	Known RBP eCLIP	10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	TPD52L1	Q16890	204 aa	Predicted RBP	10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	ZNF618	Q5T7W0	954 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	ATF7IP2	Q5U623	682 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	ARMCX5	Q6P1M9	558 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	SARM1	Q6SZW1	724 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	MPZL3	Q6UWV2	235 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	FAM43B	Q6ZT52	329 aa	Predicted RBP	10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	CATSPER4	Q7RTX7	472 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	FILIP1	Q7Z7B0	1213 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	FAM228A	Q86W67	206 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	FAM114A1	Q8IWE2	563 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	USP38	Q8NB14	1042 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	XXYLT1	Q8NBI6	393 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	NOC4L	Q9BVI4	516 aa	Known RBP	10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	PDZD7	Q9H5P4	517 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	GRPEL1	Q9HAV7	217 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	SAMSN1	Q9NSI8	373 aa	Known RBP	10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	HSPBP1	Q9NZL4	362 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	GINS2	Q9Y248	185 aa		10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	NOC2L	Q9Y3T9	749 aa	Known RBP	10.76	□□□□□ -0.69
SIN3A-205	ENST00000564778	N4BP3	O15049	544 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	CLIC2	O15247	247 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	EVI5	O60447	810 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	RPS6KA5	O75582	802 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	AKAP3	O75969	853 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	ATP1A3	P13637	1013 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	HOXA11	P31270	313 aa	Predicted RBP	10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	MRE11	P49959	708 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	CYP2J2	P51589	502 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	LPIN1	Q14693	890 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	MBTPS1	Q14703	1052 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	LRRC26	Q2I0M4	334 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	TCP11X2	Q5H9J9	407 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	EEF1DP3	Q658K8	133 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	NOTUM	Q6P988	496 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	LRRC8D	Q7L1W4	858 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	APTX	Q7Z2E3	356 aa	Known RBP	10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	POMGNT1	Q8WZA1	660 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	BORCS6	Q96GS4	357 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	CNOT6L	Q96LI5	555 aa	Known RBP	10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	HAPLN2	Q9GZV7	340 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	CDT1	Q9H211	546 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	ERVK-5	Q9HDB9	667 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	ANKFY1	Q9P2R3	1169 aa		10.75	□□□□□ -0.69
SIN3A-205	ENST00000564778	ALPK3	Q96L96	1907 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	LRRC10B	A6NIK2	292 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	KCNJ18	B7U540	433 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	GPR182	O15218	404 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms