RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 PXMP2Q9NR77 195 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 SMC4Q9NTJ3 1288 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 ARPP21Q9UBL0 812 aaPredicted RBP12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 MBD1Q9UIS9 605 aaPredicted RBP12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 STK24Q9Y6E0 443 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 GPR182O15218 404 aa12.4□□□□□ -0.42
HDGFL3-204ENST00000563790 TLX3O43711 291 aaPredicted RBP12.4□□□□□ -0.42
HDGFL3-204ENST00000563790 B4GALT3O60512 393 aa12.4□□□□□ -0.42
HDGFL3-204ENST00000563790 MBD4O95243 580 aa12.4□□□□□ -0.42
HDGFL3-204ENST00000563790 AFPP02771 609 aaKnown RBP12.4□□□□□ -0.42
HDGFL3-204ENST00000563790 GALTP07902 379 aa12.4□□□□□ -0.42
HDGFL3-204ENST00000563790 HIST2H2BCQ6DN03 193 aa12.4□□□□□ -0.42
HDGFL3-204ENST00000563790 METTL7BQ6UX53 244 aa12.4□□□□□ -0.42
HDGFL3-204ENST00000563790 SYNPOQ8N3V7 929 aa12.4□□□□□ -0.42
HDGFL3-204ENST00000563790 ZBTB10Q96DT7 871 aa12.4□□□□□ -0.42
HDGFL3-204ENST00000563790 MSANTD3Q96H12 275 aa12.4□□□□□ -0.42
HDGFL3-204ENST00000563790 ZNF334Q9HCZ1 680 aaPredicted RBP12.4□□□□□ -0.42
HDGFL3-204ENST00000563790 DBNLQ9UJU6 430 aaKnown RBP12.4□□□□□ -0.42
HDGFL3-204ENST00000563790 PCDHB15Q9Y5E8 787 aa12.4□□□□□ -0.42
HDGFL3-204ENST00000563790 HEMK1Q9Y5R4 338 aaPredicted RBP12.4□□□□□ -0.42
HDGFL3-204ENST00000563790 FN1P02751 2386 aaKnown RBP12.4□□□□□ -0.43
HDGFL3-204ENST00000563790 ZMYND10O75800 440 aa12.39□□□□□ -0.43
HDGFL3-204ENST00000563790 MYF5P13349 255 aa12.39□□□□□ -0.43
HDGFL3-204ENST00000563790 G3BP1Q13283 466 aaKnown RBP eCLIP12.39□□□□□ -0.43
HDGFL3-204ENST00000563790 MAPK6Q16659 721 aa12.39□□□□□ -0.43
HDGFL3-204ENST00000563790 UTP14CQ5TAP6 766 aaKnown RBP12.39□□□□□ -0.43
HDGFL3-204ENST00000563790 TANGO2Q6ICL3 276 aa12.39□□□□□ -0.43
HDGFL3-204ENST00000563790 TTBK2Q6IQ55 1244 aa12.39□□□□□ -0.43
HDGFL3-204ENST00000563790 PLEKHM2Q8IWE5 1019 aa12.39□□□□□ -0.43
HDGFL3-204ENST00000563790 ZNF444Q8N0Y2 327 aaPredicted RBP12.39□□□□□ -0.43
HDGFL3-204ENST00000563790 CAMKK1Q8N5S9 505 aa12.39□□□□□ -0.43
HDGFL3-204ENST00000563790 HELQQ8TDG4 1101 aa12.39□□□□□ -0.43
HDGFL3-204ENST00000563790 TTC9Q92623 222 aa12.39□□□□□ -0.43
HDGFL3-204ENST00000563790 GPKOWQ92917 476 aaPredicted RBP eCLIP12.39□□□□□ -0.43
HDGFL3-204ENST00000563790 CAMK1GQ96NX5 476 aa12.39□□□□□ -0.43
HDGFL3-204ENST00000563790 PCDHB9Q9Y5E1 797 aa12.39□□□□□ -0.43
HDGFL3-204ENST00000563790 AKAP9Q99996 3911 aa12.39□□□□□ -0.43
HDGFL3-204ENST00000563790 ABCB11O95342 1321 aa12.38□□□□□ -0.43
HDGFL3-204ENST00000563790 OPHN1O60890 802 aa12.38□□□□□ -0.43
HDGFL3-204ENST00000563790 AK2P54819 239 aa12.38□□□□□ -0.43
HDGFL3-204ENST00000563790 TLE3Q04726 772 aa12.38□□□□□ -0.43
HDGFL3-204ENST00000563790 CCINQ13939 588 aa12.38□□□□□ -0.43
HDGFL3-204ENST00000563790 SBK1Q52WX2 424 aa12.38□□□□□ -0.43
HDGFL3-204ENST00000563790 GLRX5Q86SX6 157 aa12.38□□□□□ -0.43
HDGFL3-204ENST00000563790 ECHDC2Q86YB7 292 aa12.38□□□□□ -0.43
HDGFL3-204ENST00000563790 MARCH9Q86YJ5 346 aa12.38□□□□□ -0.43
HDGFL3-204ENST00000563790 STK11IPQ8N1F8 1099 aa12.38□□□□□ -0.43
HDGFL3-204ENST00000563790 NME8Q8N427 588 aa12.38□□□□□ -0.43
HDGFL3-204ENST00000563790 NEDD1Q8NHV4 660 aa12.38□□□□□ -0.43
HDGFL3-204ENST00000563790 TMEM40Q8WWA1 233 aa12.38□□□□□ -0.43
HDGFL3-204ENST00000563790 TRMT61BQ9BVS5 477 aaKnown RBP12.38□□□□□ -0.43
HDGFL3-204ENST00000563790 FAM117AQ9C073 453 aa12.38□□□□□ -0.43
HDGFL3-204ENST00000563790 RXFP1Q9HBX9 757 aa12.38□□□□□ -0.43
HDGFL3-204ENST00000563790 SSX2IPQ9Y2D8 614 aa12.38□□□□□ -0.43
HDGFL3-204ENST00000563790 TDRD15B5MCY1 1934 aaKnown RBP12.38□□□□□ -0.43
HDGFL3-204ENST00000563790 ATRQ13535 2644 aa12.38□□□□□ -0.43
HDGFL3-204ENST00000563790 ZMYM6O95789 1325 aa12.37□□□□□ -0.43
HDGFL3-204ENST00000563790 TGM5O43548 720 aa12.37□□□□□ -0.43
HDGFL3-204ENST00000563790 GAS2O43903 313 aaKnown RBP12.37□□□□□ -0.43
HDGFL3-204ENST00000563790 URODP06132 367 aa12.37□□□□□ -0.43
HDGFL3-204ENST00000563790 GRM2Q14416 872 aa12.37□□□□□ -0.43
HDGFL3-204ENST00000563790 CCDC96Q2M329 555 aa12.37□□□□□ -0.43
HDGFL3-204ENST00000563790 GALNT15Q8N3T1 639 aa12.37□□□□□ -0.43
HDGFL3-204ENST00000563790 RSPH1Q8WYR4 309 aa12.37□□□□□ -0.43
HDGFL3-204ENST00000563790 BAP1Q92560 729 aa12.37□□□□□ -0.43
HDGFL3-204ENST00000563790 PIGKQ92643 395 aa12.37□□□□□ -0.43
HDGFL3-204ENST00000563790 DNAJC2Q99543 621 aaKnown RBP12.37□□□□□ -0.43
HDGFL3-204ENST00000563790 GDE1Q9NZC3 331 aa12.37□□□□□ -0.43
HDGFL3-204ENST00000563790 SEPT3Q9UH03 358 aa12.37□□□□□ -0.43
HDGFL3-204ENST00000563790 KCNH3Q9ULD8 1083 aa12.37□□□□□ -0.43
HDGFL3-204ENST00000563790 RRN3P2A6NIE6 340 aa12.36□□□□□ -0.43
HDGFL3-204ENST00000563790 KRT10P13645 584 aa12.36□□□□□ -0.43
HDGFL3-204ENST00000563790 FCARP24071 287 aa12.36□□□□□ -0.43
HDGFL3-204ENST00000563790 GBP1P32455 592 aa12.36□□□□□ -0.43
HDGFL3-204ENST00000563790 TTF1Q15361 905 aaPredicted RBP12.36□□□□□ -0.43
HDGFL3-204ENST00000563790 PKN3Q6P5Z2 889 aa12.36□□□□□ -0.43
HDGFL3-204ENST00000563790 LILRA6Q6PI73 481 aa12.36□□□□□ -0.43
HDGFL3-204ENST00000563790 SLC23A3Q6PIS1 610 aa12.36□□□□□ -0.43
HDGFL3-204ENST00000563790 ATG14Q6ZNE5 492 aa12.36□□□□□ -0.43
HDGFL3-204ENST00000563790 ZNF598Q86UK7 904 aaKnown RBP12.36□□□□□ -0.43
HDGFL3-204ENST00000563790 C11orf74Q86VG3 221 aa12.36□□□□□ -0.43
HDGFL3-204ENST00000563790 DCAF4Q8WV16 495 aa12.36□□□□□ -0.43
HDGFL3-204ENST00000563790 POM121Q96HA1 1249 aa12.36□□□□□ -0.43
HDGFL3-204ENST00000563790 NRDE2Q9H7Z3 1164 aa12.36□□□□□ -0.43
HDGFL3-204ENST00000563790 TLR7Q9NYK1 1049 aaKnown RBP12.36□□□□□ -0.43
HDGFL3-204ENST00000563790 TELO2Q9Y4R8 837 aa12.36□□□□□ -0.43
HDGFL3-204ENST00000563790 PCDHA2Q9Y5H9 948 aa12.36□□□□□ -0.43
HDGFL3-204ENST00000563790 CCDC168Q8NDH2 2452 aa12.35□□□□□ -0.43
HDGFL3-204ENST00000563790 SH3BP5O60239 455 aa12.35□□□□□ -0.43
HDGFL3-204ENST00000563790 DKK1O94907 266 aa12.35□□□□□ -0.43
HDGFL3-204ENST00000563790 SOD2P04179 222 aa12.35□□□□□ -0.43
HDGFL3-204ENST00000563790 C8AP07357 584 aa12.35□□□□□ -0.43
HDGFL3-204ENST00000563790 HSPD1P10809 573 aaKnown RBP12.35□□□□□ -0.43
HDGFL3-204ENST00000563790 MYCLP12524 364 aaPredicted RBP12.35□□□□□ -0.43
HDGFL3-204ENST00000563790 HLA-EP13747 358 aa12.35□□□□□ -0.43
HDGFL3-204ENST00000563790 RPL17P18621 184 aaKnown RBP12.35□□□□□ -0.43
HDGFL3-204ENST00000563790 TNFRSF8P28908 595 aa12.35□□□□□ -0.43
HDGFL3-204ENST00000563790 IGBP1P78318 339 aa12.35□□□□□ -0.43
HDGFL3-204ENST00000563790 USH1GQ495M9 461 aa12.35□□□□□ -0.43
HDGFL3-204ENST00000563790 CYFIP1Q7L576 1253 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms