RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 RFFLQ8WZ73 363 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 ZNF70Q9UC06 446 aaPredicted RBP11.2□□□□□ -0.62
RNF40-204ENST00000563683 CNOT8Q9UFF9 292 aaKnown RBP11.2□□□□□ -0.62
RNF40-204ENST00000563683 SERPINA10Q9UK55 444 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 NFS1Q9Y697 457 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 MYH13Q9UKX3 1938 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 WDR64B1ANS9 1081 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 K7ERI5 159 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 ATP5DP30049 168 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 CASP5P51878 434 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 ZBTB16Q05516 673 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 ECM1Q16610 540 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 PRAMEF18Q5VWM3 479 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 NEK9Q8TD19 979 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 TRIM51Q9BSJ1 452 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 STK33Q9BYT3 514 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 ZNF408Q9H9D4 720 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 RNF146Q9NTX7 359 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 APEX2Q9UBZ4 518 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 ZHX2Q9Y6X8 837 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 ERVK-9P63128 1117 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 IGBP1P78318 339 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 PLA2G4FQ68DD2 849 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 ZNF571Q7Z3V5 609 aaPredicted RBP11.2□□□□□ -0.62
RNF40-204ENST00000563683 ZBTB33Q86T24 672 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 SLC30A5Q8TAD4 765 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.2□□□□□ -0.62
RNF40-204ENST00000563683 BAP1Q92560 729 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 ZNF668Q96K58 619 aaPredicted RBP11.2□□□□□ -0.62
RNF40-204ENST00000563683 XPO6Q96QU8 1125 aaKnown RBP11.2□□□□□ -0.62
RNF40-204ENST00000563683 EBF2Q9HAK2 575 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 TBC1D22BQ9NU19 505 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 NOP53Q9NZM5 478 aaKnown RBP11.2□□□□□ -0.62
RNF40-204ENST00000563683 PHF20L1A8MW92 1017 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 ECEL1O95672 775 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 ATF2P15336 505 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 DRD4P21917 467 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 YWHABP31946 246 aaKnown RBP11.2□□□□□ -0.62
RNF40-204ENST00000563683 STX2P32856 288 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 BFSP1Q12934 665 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 COG2Q14746 738 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 SNRNP48Q6IEG0 339 aaKnown RBP11.2□□□□□ -0.62
RNF40-204ENST00000563683 NSMCE1Q8WV22 266 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 HOMER3Q9NSC5 361 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 TRPC6Q9Y210 931 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 GAKO14976 1311 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 CLTAP09496 248 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 SREBF1P36956 1147 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 MYO1EQ12965 1108 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 GADL1Q6ZQY3 521 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 TCP11Q8WWU5 503 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 KCNH7Q9NS40 1196 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.19□□□□□ -0.62
RNF40-204ENST00000563683 TMEM59LQ9UK28 342 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 C15orf41Q9Y2V0 281 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 CD2APQ9Y5K6 639 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 SPATA31A6Q5VVP1 1343 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 GOLGA8SH3BPF8 625 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 EML1O00423 815 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 ASAP2O43150 1006 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 ATMINO43313 823 aaPredicted RBP11.19□□□□□ -0.62
RNF40-204ENST00000563683 TMEM191BP0C7N4 346 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 SRGAP2CP0DJJ0 459 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 MARK3P27448 753 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 RWDD2BP57060 319 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 TFAMQ00059 246 aaKnown RBP11.19□□□□□ -0.62
RNF40-204ENST00000563683 TMEM119Q4V9L6 283 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 SPDYCQ5MJ68 293 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 CROCCP2Q86T23 111 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 PPP1R14CQ8TAE6 165 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 ACTRT1Q8TDG2 376 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 MAIP1Q8WWC4 291 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 DNAJC19Q96DA6 116 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 AGPAT1Q99943 283 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 FAM129AQ9BZQ8 928 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 NXF1Q9UBU9 619 aaKnown RBP11.19□□□□□ -0.62
RNF40-204ENST00000563683 MYH2Q9UKX2 1941 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 POC1B-GALNT4F8VUJ3 575 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 INO80B-WBP1J3KQ70 363 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 OPLAHO14841 1288 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 CCND2P30279 289 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 HOXA10P31260 410 aaPredicted RBP11.19□□□□□ -0.62
RNF40-204ENST00000563683 SPDL1Q96EA4 605 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 WRNIP1Q96S55 665 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 SH3GL3Q99963 347 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 KIFC3Q9BVG8 833 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 NUP85Q9BW27 656 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 INO80BQ9C086 356 aaPredicted RBP11.19□□□□□ -0.62
RNF40-204ENST00000563683 GPRC5CQ9NQ84 441 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 AGPAT3Q9NRZ7 376 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 RAB20Q9NX57 234 aa11.19□□□□□ -0.62
RNF40-204ENST00000563683 MYH10P35580 1976 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 BPIFB4P59827 614 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 TRADDQ15628 312 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 SLC35G1Q2M3R5 365 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 C11orf91Q3C1V1 193 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 ERMARDQ5T6L9 678 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 LRRC55Q6ZSA7 311 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 ZNF564Q8TBZ8 553 aaPredicted RBP11.18□□□□□ -0.62
RNF40-204ENST00000563683 FAM151AQ8WW52 585 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms