RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 PCDHGC5Q9Y5F6 944 aa18.82■□□□□ 0.6
SPSB3-202ENST00000563668 ARHGEF35A5YM69 484 aa18.81■□□□□ 0.6
SPSB3-202ENST00000563668 INO80B-WBP1J3KQ70 363 aa18.81■□□□□ 0.6
SPSB3-202ENST00000563668 B4GALT5O43286 388 aa18.81■□□□□ 0.6
SPSB3-202ENST00000563668 CYP11B2P19099 503 aa18.81■□□□□ 0.6
SPSB3-202ENST00000563668 MUTP22033 750 aa18.81■□□□□ 0.6
SPSB3-202ENST00000563668 IRS1P35568 1242 aa18.81■□□□□ 0.6
SPSB3-202ENST00000563668 AFF1P51825 1210 aaKnown RBP18.81■□□□□ 0.6
SPSB3-202ENST00000563668 TCEAL5Q5H9L2 206 aa18.81■□□□□ 0.6
SPSB3-202ENST00000563668 SPOUT1Q5T280 376 aaKnown RBP18.81■□□□□ 0.6
SPSB3-202ENST00000563668 KRBA2Q6ZNG9 492 aa18.81■□□□□ 0.6
SPSB3-202ENST00000563668 CEP57L1Q8IYX8 460 aa18.81■□□□□ 0.6
SPSB3-202ENST00000563668 PNMA5Q96PV4 448 aa18.81■□□□□ 0.6
SPSB3-202ENST00000563668 ASB2Q96Q27 587 aa18.81■□□□□ 0.6
SPSB3-202ENST00000563668 PLIN2Q99541 437 aa18.81■□□□□ 0.6
SPSB3-202ENST00000563668 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.81■□□□□ 0.6
SPSB3-202ENST00000563668 ZKSCAN5Q9Y2L8 839 aa18.81■□□□□ 0.6
SPSB3-202ENST00000563668 PCDHB2Q9Y5E7 798 aa18.81■□□□□ 0.6
SPSB3-202ENST00000563668 PLXNA4Q9HCM2 1894 aa18.81■□□□□ 0.6
SPSB3-202ENST00000563668 TTLL13PA6NNM8 815 aa18.8■□□□□ 0.6
SPSB3-202ENST00000563668 ZNF623O75123 536 aa18.8■□□□□ 0.6
SPSB3-202ENST00000563668 PTMAP06454 111 aaKnown RBP18.8■□□□□ 0.6
SPSB3-202ENST00000563668 KCNQ1P51787 676 aa18.8■□□□□ 0.6
SPSB3-202ENST00000563668 NLRP12P59046 1061 aa18.8■□□□□ 0.6
SPSB3-202ENST00000563668 POU5F1BQ06416 359 aa18.8■□□□□ 0.6
SPSB3-202ENST00000563668 PTPROQ16827 1216 aa18.8■□□□□ 0.6
SPSB3-202ENST00000563668 KRT79Q5XKE5 535 aa18.8■□□□□ 0.6
SPSB3-202ENST00000563668 CDR2LQ86X02 465 aaPredicted RBP18.8■□□□□ 0.6
SPSB3-202ENST00000563668 COLGALT1Q8NBJ5 622 aa18.8■□□□□ 0.6
SPSB3-202ENST00000563668 ATXN2LQ8WWM7 1075 aaKnown RBP18.8■□□□□ 0.6
SPSB3-202ENST00000563668 P2RX5Q93086 422 aa18.8■□□□□ 0.6
SPSB3-202ENST00000563668 EIF2AQ9BY44 585 aaKnown RBP18.8■□□□□ 0.6
SPSB3-202ENST00000563668 RNF216Q9NWF9 866 aaPredicted RBP18.8■□□□□ 0.6
SPSB3-202ENST00000563668 USP20Q9Y2K6 914 aa18.8■□□□□ 0.6
SPSB3-202ENST00000563668 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.79■□□□□ 0.6
SPSB3-202ENST00000563668 PLCB2Q00722 1185 aa18.79■□□□□ 0.6
SPSB3-202ENST00000563668 TFDP1Q14186 410 aa18.79■□□□□ 0.6
SPSB3-202ENST00000563668 ZRSR1Q15695 479 aaKnown RBP18.79■□□□□ 0.6
SPSB3-202ENST00000563668 AGMOQ6ZNB7 445 aa18.79■□□□□ 0.6
SPSB3-202ENST00000563668 MCPH1Q8NEM0 835 aa18.79■□□□□ 0.6
SPSB3-202ENST00000563668 POF1BQ8WVV4 589 aa18.79■□□□□ 0.6
SPSB3-202ENST00000563668 BPIFA3Q9BQP9 254 aa18.79■□□□□ 0.6
SPSB3-202ENST00000563668 RAB34Q9BZG1 259 aa18.79■□□□□ 0.6
SPSB3-202ENST00000563668 NAT10Q9H0A0 1025 aaKnown RBP18.79■□□□□ 0.6
SPSB3-202ENST00000563668 LRRIQ4A6NIV6 560 aa18.79■□□□□ 0.6
SPSB3-202ENST00000563668 OFD1O75665 1012 aa18.79■□□□□ 0.6
SPSB3-202ENST00000563668 EDN1P05305 212 aa18.79■□□□□ 0.6
SPSB3-202ENST00000563668 ARF4P18085 180 aaPredicted RBP18.79■□□□□ 0.6
SPSB3-202ENST00000563668 GTF2F1P35269 517 aaKnown RBP eCLIP18.79■□□□□ 0.6
SPSB3-202ENST00000563668 MRPS5P82675 430 aaKnown RBP18.79■□□□□ 0.6
SPSB3-202ENST00000563668 SARM1Q6SZW1 724 aa18.79■□□□□ 0.6
SPSB3-202ENST00000563668 MRPL10Q7Z7H8 261 aaKnown RBP18.79■□□□□ 0.6
SPSB3-202ENST00000563668 DHX40Q8IX18 779 aaKnown RBP18.79■□□□□ 0.6
SPSB3-202ENST00000563668 ABI1Q8IZP0 508 aa18.79■□□□□ 0.6
SPSB3-202ENST00000563668 SMG8Q8ND04 991 aaKnown RBP18.79■□□□□ 0.6
SPSB3-202ENST00000563668 LRRC15Q8TF66 581 aa18.79■□□□□ 0.6
SPSB3-202ENST00000563668 HLA-CQ95604 372 aa18.79■□□□□ 0.6
SPSB3-202ENST00000563668 KIFC3Q9BVG8 833 aa18.79■□□□□ 0.6
SPSB3-202ENST00000563668 RUSC1Q9BVN2 902 aa18.79■□□□□ 0.6
SPSB3-202ENST00000563668 NFKBIZQ9BYH8 718 aa18.79■□□□□ 0.6
SPSB3-202ENST00000563668 CSRNP2Q9H175 543 aa18.79■□□□□ 0.6
SPSB3-202ENST00000563668 RNF39Q9H2S5 420 aa18.79■□□□□ 0.6
SPSB3-202ENST00000563668 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.78■□□□□ 0.6
SPSB3-202ENST00000563668 HOXA2O43364 376 aa18.78■□□□□ 0.6
SPSB3-202ENST00000563668 B4GALT3O60512 393 aa18.78■□□□□ 0.6
SPSB3-202ENST00000563668 FGF18O76093 207 aa18.78■□□□□ 0.6
SPSB3-202ENST00000563668 ERLIN2O94905 339 aa18.78■□□□□ 0.6
SPSB3-202ENST00000563668 EYA4O95677 639 aa18.78■□□□□ 0.6
SPSB3-202ENST00000563668 ZNF75DP51815 510 aa18.78■□□□□ 0.6
SPSB3-202ENST00000563668 TJAP1Q5JTD0 557 aa18.78■□□□□ 0.6
SPSB3-202ENST00000563668 SPECC1Q5M775 1068 aa18.78■□□□□ 0.6
SPSB3-202ENST00000563668 ARL6IP4Q66PJ3 421 aaKnown RBP18.78■□□□□ 0.6
SPSB3-202ENST00000563668 ADGRD2Q7Z7M1 963 aa18.78■□□□□ 0.6
SPSB3-202ENST00000563668 DAW1Q8N136 415 aa18.78■□□□□ 0.6
SPSB3-202ENST00000563668 CNNM3Q8NE01 707 aa18.78■□□□□ 0.6
SPSB3-202ENST00000563668 LMAN2LQ9H0V9 348 aa18.78■□□□□ 0.6
SPSB3-202ENST00000563668 NSUN3Q9H649 340 aaKnown RBP18.78■□□□□ 0.6
SPSB3-202ENST00000563668 DNM3Q9UQ16 869 aa18.78■□□□□ 0.6
SPSB3-202ENST00000563668 INPP5FQ9Y2H2 1132 aa18.78■□□□□ 0.6
SPSB3-202ENST00000563668 HES2Q9Y543 173 aa18.78■□□□□ 0.6
SPSB3-202ENST00000563668 PCDHB12Q9Y5F1 795 aa18.78■□□□□ 0.6
SPSB3-202ENST00000563668 NT5C1B-RDH14C9J2C7 533 aa18.77■□□□□ 0.6
SPSB3-202ENST00000563668 GOLGA6L19H0YKK7 550 aa18.77■□□□□ 0.6
SPSB3-202ENST00000563668 BMP1P13497 986 aa18.77■□□□□ 0.6
SPSB3-202ENST00000563668 MSNP26038 577 aaKnown RBP18.77■□□□□ 0.6
SPSB3-202ENST00000563668 ERVFC1P60507 584 aa18.77■□□□□ 0.6
SPSB3-202ENST00000563668 HYAL1Q12794 435 aa18.77■□□□□ 0.6
SPSB3-202ENST00000563668 DPCR1Q3MIW9 517 aa18.77■□□□□ 0.6
SPSB3-202ENST00000563668 NAALADL2Q58DX5 795 aa18.77■□□□□ 0.6
SPSB3-202ENST00000563668 HYIQ5T013 277 aa18.77■□□□□ 0.6
SPSB3-202ENST00000563668 CDCA2Q69YH5 1023 aaPredicted RBP18.77■□□□□ 0.6
SPSB3-202ENST00000563668 KCNT2Q6UVM3 1135 aa18.77■□□□□ 0.6
SPSB3-202ENST00000563668 LRRC43Q8N309 656 aa18.77■□□□□ 0.6
SPSB3-202ENST00000563668 RAB27AP51159 221 aa18.76■□□□□ 0.59
SPSB3-202ENST00000563668 TIGD5Q53EQ6 642 aa18.76■□□□□ 0.59
SPSB3-202ENST00000563668 RINT1Q6NUQ1 792 aa18.76■□□□□ 0.59
SPSB3-202ENST00000563668 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.76■□□□□ 0.59
SPSB3-202ENST00000563668 TMEM173Q86WV6 379 aaPredicted RBP18.76■□□□□ 0.59
SPSB3-202ENST00000563668 THNSL1Q8IYQ7 743 aa18.76■□□□□ 0.59
SPSB3-202ENST00000563668 FZD8Q9H461 694 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms