RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 EPHA7Q15375 998 aa20.84■□□□□ 0.93
NME3-204ENST00000563498 FERMT3Q86UX7 667 aa20.84■□□□□ 0.93
NME3-204ENST00000563498 CCDC105Q8IYK2 499 aa20.84■□□□□ 0.93
NME3-204ENST00000563498 COLGALT2Q8IYK4 626 aa20.84■□□□□ 0.93
NME3-204ENST00000563498 RNF149Q8NC42 400 aa20.84■□□□□ 0.93
NME3-204ENST00000563498 STAMQ92783 540 aa20.84■□□□□ 0.93
NME3-204ENST00000563498 NKD2Q969F2 451 aaPredicted RBP20.84■□□□□ 0.93
NME3-204ENST00000563498 NAP1L4Q99733 375 aaKnown RBP20.84■□□□□ 0.93
NME3-204ENST00000563498 LXNQ9BS40 222 aa20.84■□□□□ 0.93
NME3-204ENST00000563498 PHF20Q9BVI0 1012 aa20.84■□□□□ 0.93
NME3-204ENST00000563498 RXFP1Q9HBX9 757 aa20.84■□□□□ 0.93
NME3-204ENST00000563498 WDR6Q9NNW5 1121 aaKnown RBP20.84■□□□□ 0.93
NME3-204ENST00000563498 C2CD2LO14523 706 aa20.83■□□□□ 0.93
NME3-204ENST00000563498 TEX28O15482 410 aa20.83■□□□□ 0.93
NME3-204ENST00000563498 ERLIN2O94905 339 aa20.83■□□□□ 0.93
NME3-204ENST00000563498 PAPLNO95428 1278 aa20.83■□□□□ 0.93
NME3-204ENST00000563498 GLUD2P49448 558 aa20.83■□□□□ 0.93
NME3-204ENST00000563498 AK2P54819 239 aa20.83■□□□□ 0.93
NME3-204ENST00000563498 DSC1Q08554 894 aa20.83■□□□□ 0.93
NME3-204ENST00000563498 KIAA0319Q5VV43 1072 aa20.83■□□□□ 0.93
NME3-204ENST00000563498 FRMD5Q7Z6J6 570 aa20.83■□□□□ 0.93
NME3-204ENST00000563498 HDAC7Q8WUI4 952 aa20.83■□□□□ 0.93
NME3-204ENST00000563498 HAS1Q92839 578 aa20.83■□□□□ 0.93
NME3-204ENST00000563498 TM6SF1Q9BZW5 370 aa20.83■□□□□ 0.93
NME3-204ENST00000563498 FBXL21Q9UKT6 434 aa20.83■□□□□ 0.93
NME3-204ENST00000563498 KCNJ14Q9UNX9 436 aa20.83■□□□□ 0.93
NME3-204ENST00000563498 PRG3Q9Y2Y8 225 aaPredicted RBP20.83■□□□□ 0.93
NME3-204ENST00000563498 IPPQ9Y573 584 aa20.83■□□□□ 0.93
NME3-204ENST00000563498 PTPRZ1P23471 2315 aaPredicted RBP20.82■□□□□ 0.92
NME3-204ENST00000563498 CCDC195A0A1B0GUA6 201 aa20.82■□□□□ 0.92
NME3-204ENST00000563498 ARL5CA6NH57 179 aa20.82■□□□□ 0.92
NME3-204ENST00000563498 PI15O43692 258 aa20.82■□□□□ 0.92
NME3-204ENST00000563498 TSPAN1O60635 241 aa20.82■□□□□ 0.92
NME3-204ENST00000563498 N4BP1O75113 896 aaKnown RBP20.82■□□□□ 0.92
NME3-204ENST00000563498 GLUD1P00367 558 aa20.82■□□□□ 0.92
NME3-204ENST00000563498 DSG1Q02413 1049 aa20.82■□□□□ 0.92
NME3-204ENST00000563498 POU5F1BQ06416 359 aa20.82■□□□□ 0.92
NME3-204ENST00000563498 MXD4Q14582 209 aaPredicted RBP20.82■□□□□ 0.92
NME3-204ENST00000563498 NOTUMQ6P988 496 aa20.82■□□□□ 0.92
NME3-204ENST00000563498 GPR65Q8IYL9 337 aa20.82■□□□□ 0.92
NME3-204ENST00000563498 SIX5Q8N196 739 aa20.82■□□□□ 0.92
NME3-204ENST00000563498 ZSWIM4Q9H7M6 989 aa20.82■□□□□ 0.92
NME3-204ENST00000563498 EPS15L1Q9UBC2 864 aa20.82■□□□□ 0.92
NME3-204ENST00000563498 WNT16Q9UBV4 365 aa20.82■□□□□ 0.92
NME3-204ENST00000563498 RIF1Q5UIP0 2472 aaKnown RBP20.82■□□□□ 0.92
NME3-204ENST00000563498 CCNT1O60563 726 aaKnown RBP20.81■□□□□ 0.92
NME3-204ENST00000563498 NR1I2O75469 434 aa20.81■□□□□ 0.92
NME3-204ENST00000563498 CDKL5O76039 1030 aa20.81■□□□□ 0.92
NME3-204ENST00000563498 XBP1P17861 261 aa20.81■□□□□ 0.92
NME3-204ENST00000563498 OR1G1P47890 313 aa20.81■□□□□ 0.92
NME3-204ENST00000563498 PTENP60484 403 aa20.81■□□□□ 0.92
NME3-204ENST00000563498 NCBP1Q09161 790 aaKnown RBP20.81■□□□□ 0.92
NME3-204ENST00000563498 XKR9Q5GH70 373 aa20.81■□□□□ 0.92
NME3-204ENST00000563498 TAS1R1Q7RTX1 841 aa20.81■□□□□ 0.92
NME3-204ENST00000563498 IFNLR1Q8IU57 520 aaPredicted RBP20.81■□□□□ 0.92
NME3-204ENST00000563498 NXPE3Q969Y0 559 aa20.81■□□□□ 0.92
NME3-204ENST00000563498 GAD1Q99259 594 aa20.81■□□□□ 0.92
NME3-204ENST00000563498 MTRQ99707 1265 aa20.81■□□□□ 0.92
NME3-204ENST00000563498 EIF2AQ9BY44 585 aaKnown RBP20.81■□□□□ 0.92
NME3-204ENST00000563498 CHST7Q9NS84 486 aa20.81■□□□□ 0.92
NME3-204ENST00000563498 BMP2KQ9NSY1 1161 aaPredicted RBP20.81■□□□□ 0.92
NME3-204ENST00000563498 RGL1Q9NZL6 768 aa20.81■□□□□ 0.92
NME3-204ENST00000563498 ARID2Q68CP9 1835 aa20.81■□□□□ 0.92
NME3-204ENST00000563498 CLUHO75153 1309 aa20.8■□□□□ 0.92
NME3-204ENST00000563498 STK36Q9NRP7 1315 aa20.8■□□□□ 0.92
NME3-204ENST00000563498 MLH1P40692 756 aa20.8■□□□□ 0.92
NME3-204ENST00000563498 SPIRE1Q08AE8 756 aa20.8■□□□□ 0.92
NME3-204ENST00000563498 STK3Q13188 491 aa20.8■□□□□ 0.92
NME3-204ENST00000563498 TFDP1Q14186 410 aa20.8■□□□□ 0.92
NME3-204ENST00000563498 SLFN12Q8IYM2 578 aa20.8■□□□□ 0.92
NME3-204ENST00000563498 DTWD2Q8NBA8 298 aa20.8■□□□□ 0.92
NME3-204ENST00000563498 CSRNP2Q9H175 543 aa20.8■□□□□ 0.92
NME3-204ENST00000563498 RNF39Q9H2S5 420 aa20.8■□□□□ 0.92
NME3-204ENST00000563498 PLEKHA4Q9H4M7 779 aa20.8■□□□□ 0.92
NME3-204ENST00000563498 GIT1Q9Y2X7 761 aa20.8■□□□□ 0.92
NME3-204ENST00000563498 DMDP11532 3685 aa20.8■□□□□ 0.92
NME3-204ENST00000563498 FAM186AA6NE01 2351 aa20.8■□□□□ 0.92
NME3-204ENST00000563498 SPTBN4Q9H254 2564 aa20.8■□□□□ 0.92
NME3-204ENST00000563498 MARCH6O60337 910 aa20.79■□□□□ 0.92
NME3-204ENST00000563498 GBP2P32456 591 aaPredicted RBP20.79■□□□□ 0.92
NME3-204ENST00000563498 ANGPT1Q15389 498 aa20.79■□□□□ 0.92
NME3-204ENST00000563498 NCAPH2Q6IBW4 605 aa20.79■□□□□ 0.92
NME3-204ENST00000563498 PIK3AP1Q6ZUJ8 805 aa20.79■□□□□ 0.92
NME3-204ENST00000563498 HACE1Q8IYU2 909 aa20.79■□□□□ 0.92
NME3-204ENST00000563498 DYDC2Q96IM9 177 aa20.79■□□□□ 0.92
NME3-204ENST00000563498 LARP6Q9BRS8 491 aaKnown RBP20.79■□□□□ 0.92
NME3-204ENST00000563498 COLEC11Q9BWP8 271 aa20.79■□□□□ 0.92
NME3-204ENST00000563498 NFKBIZQ9BYH8 718 aa20.79■□□□□ 0.92
NME3-204ENST00000563498 XPNPEP1Q9NQW7 623 aa20.79■□□□□ 0.92
NME3-204ENST00000563498 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.79■□□□□ 0.92
NME3-204ENST00000563498 ZMYM2Q9UBW7 1377 aa20.79■□□□□ 0.92
NME3-204ENST00000563498 VPS13AQ96RL7 3174 aa20.78■□□□□ 0.92
NME3-204ENST00000563498 ZBTB39O15060 712 aa20.78■□□□□ 0.92
NME3-204ENST00000563498 NARSO43776 548 aaKnown RBP20.78■□□□□ 0.92
NME3-204ENST00000563498 LYPLA2O95372 231 aa20.78■□□□□ 0.92
NME3-204ENST00000563498 BAG4O95429 457 aaKnown RBP20.78■□□□□ 0.92
NME3-204ENST00000563498 SCNN1GP51170 649 aa20.78■□□□□ 0.92
NME3-204ENST00000563498 MBTD1Q05BQ5 628 aa20.78■□□□□ 0.92
NME3-204ENST00000563498 CTTNQ14247 550 aaKnown RBP20.78■□□□□ 0.92
NME3-204ENST00000563498 POTEDQ86YR6 584 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms