RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 ZPBP2Q6X784 338 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 SRGAP1Q7Z6B7 1085 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 SERINC5Q86VE9 423 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 VSTM4Q8IW00 320 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 FAM186BQ8IYM0 893 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 NME8Q8N427 588 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 SLC43A3Q8NBI5 491 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 XXYLT1Q8NBI6 393 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 RDH13Q8NBN7 331 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 SPC24Q8NBT2 197 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 SAAL1Q96ER3 474 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 METTL14Q9HCE5 456 aaKnown RBP11.11□□□□□ -0.63
SMG1-208ENST00000563448 PRMT7Q9NVM4 692 aaPredicted RBP11.11□□□□□ -0.63
SMG1-208ENST00000563448 OGDHLQ9ULD0 1010 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 FRMD4BQ9Y2L6 1034 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 DNM1LO00429 736 aa11.1□□□□□ -0.63
SMG1-208ENST00000563448 ABLIM1O14639 778 aa11.1□□□□□ -0.63
SMG1-208ENST00000563448 PRPF4BQ13523 1007 aaKnown RBP11.1□□□□□ -0.63
SMG1-208ENST00000563448 PTGISQ16647 500 aa11.1□□□□□ -0.63
SMG1-208ENST00000563448 VWA3BQ502W6 1294 aa11.1□□□□□ -0.63
SMG1-208ENST00000563448 DRC7Q8IY82 874 aa11.1□□□□□ -0.63
SMG1-208ENST00000563448 ZNF333Q96JL9 665 aa11.1□□□□□ -0.63
SMG1-208ENST00000563448 FBXL18Q96ME1 805 aa11.1□□□□□ -0.63
SMG1-208ENST00000563448 SCLT1Q96NL6 688 aa11.1□□□□□ -0.63
SMG1-208ENST00000563448 OSMRQ99650 979 aa11.1□□□□□ -0.63
SMG1-208ENST00000563448 STARD7Q9NQZ5 370 aa11.1□□□□□ -0.63
SMG1-208ENST00000563448 ARMCX3Q9UH62 379 aaPredicted RBP11.1□□□□□ -0.63
SMG1-208ENST00000563448 A0A0U1RQG5 324 aaPredicted RBP11.09□□□□□ -0.63
SMG1-208ENST00000563448 LGALS16A8MUM7 142 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 MAPK13O15264 365 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 TPM3P06753 285 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 ADRB2P07550 413 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 FGFR4P22455 802 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 PROZP22891 400 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 PKN2Q16513 984 aaKnown RBP11.09□□□□□ -0.63
SMG1-208ENST00000563448 SLFN12LQ6IEE8 588 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 TSHZ1Q6ZSZ6 1077 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 TMC6Q7Z403 805 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 GPD1LQ8N335 351 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 TMEM40Q8WWA1 233 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 PRIMPOLQ96LW4 560 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 GCOM2Q9BZD3 368 aaPredicted RBP11.09□□□□□ -0.63
SMG1-208ENST00000563448 NDST4Q9H3R1 872 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 PTPRHQ9HD43 1115 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 TRMT13Q9NUP7 481 aaKnown RBP11.09□□□□□ -0.63
SMG1-208ENST00000563448 GINS2Q9Y248 185 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 A0A0B4J269 797 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 RBAK-RBAKDNI3L0D1 243 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 TOM1L1O75674 476 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 TPM2P07951 284 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 DARSP14868 501 aaKnown RBP11.09□□□□□ -0.63
SMG1-208ENST00000563448 MCCD1P59942 119 aaPredicted RBP11.09□□□□□ -0.63
SMG1-208ENST00000563448 UBXN1Q04323 297 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 KCNH2Q12809 1159 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 ATF7IP2Q5U623 682 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 EEF1DP3Q658K8 133 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 CDR2LQ86X02 465 aaPredicted RBP11.09□□□□□ -0.63
SMG1-208ENST00000563448 CBWD2Q8IUF1 395 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 PLEKHO2Q8TD55 490 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 SLC35C1Q96A29 364 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 ARMC5Q96C12 935 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 CELF4Q9BZC1 486 aaKnown RBP11.09□□□□□ -0.63
SMG1-208ENST00000563448 ANKFY1Q9P2R3 1169 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 AGO2Q9UKV8 859 aaKnown RBP11.09□□□□□ -0.63
SMG1-208ENST00000563448 TNFSF13BQ9Y275 285 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.09□□□□□ -0.63
SMG1-208ENST00000563448 CNTNAP2Q9UHC6 1331 aa11.09□□□□□ -0.63
SMG1-208ENST00000563448 PES1O00541 588 aaKnown RBP11.08□□□□□ -0.64
SMG1-208ENST00000563448 KIAA0391O15091 583 aaKnown RBP11.08□□□□□ -0.64
SMG1-208ENST00000563448 CLDN3O15551 220 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 EXTL3O43909 919 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 TSPAN1O60635 241 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 SGPL1O95470 568 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 ARF4P18085 180 aaPredicted RBP11.08□□□□□ -0.64
SMG1-208ENST00000563448 MATR3P43243 847 aaKnown RBP eCLIP11.08□□□□□ -0.64
SMG1-208ENST00000563448 MNX1P50219 401 aaPredicted RBP11.08□□□□□ -0.64
SMG1-208ENST00000563448 CRYBB1P53674 252 aaPredicted RBP11.08□□□□□ -0.64
SMG1-208ENST00000563448 MRPS6P82932 125 aaKnown RBP11.08□□□□□ -0.64
SMG1-208ENST00000563448 MGAT3Q09327 533 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 BFSP1Q12934 665 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 SNX17Q15036 470 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 SNRNP35Q16560 246 aaKnown RBP11.08□□□□□ -0.64
SMG1-208ENST00000563448 CRELD2Q6UXH1 353 aaPredicted RBP11.08□□□□□ -0.64
SMG1-208ENST00000563448 ZBTB33Q86T24 672 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 RPAINQ86UA6 219 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 ZNF710Q8N1W2 664 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 CCDC155Q8N6L0 562 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 DHX38Q92620 1227 aaKnown RBP11.08□□□□□ -0.64
SMG1-208ENST00000563448 CPB2Q96IY4 423 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 MSTO1Q9BUK6 570 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 CRISPLD2Q9H0B8 497 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 TRPV2Q9Y5S1 764 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 CDY2AQ9Y6F7 541 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 TANC1Q9C0D5 1861 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 SCN5AQ14524 2016 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 ARVCFO00192 962 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 FAM189A1O60320 539 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 B4GALT4O60513 344 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 ERLIN2O94905 339 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 LDHAP00338 332 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms