RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 PHLPP2Q6ZVD8 1323 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 H3BNC9 293 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 K7ERI5 159 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 ABLIM1O14639 778 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 INPPL1O15357 1258 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 HOXA2O43364 376 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 NPTXRO95502 500 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 LIG1P18858 919 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 STAT6P42226 847 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 NUCB2P80303 420 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 DMP1Q13316 513 aaPredicted RBP9.41□□□□□ -0.9
UBR1-204ENST00000563239 PRPF4BQ13523 1007 aaKnown RBP9.41□□□□□ -0.9
UBR1-204ENST00000563239 CAMK1Q14012 370 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 ADALQ6DHV7 355 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 SLC27A1Q6PCB7 646 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 SV2BQ7L1I2 683 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 DYMQ7RTS9 669 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 GSTCDQ8NEC7 633 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 FBXO22Q8NEZ5 403 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 DDX12PQ92771 950 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 STAMQ92783 540 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 SPATA32Q96LK8 384 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 SAMD11Q96NU1 681 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 ACO2Q99798 780 aaKnown RBP9.41□□□□□ -0.9
UBR1-204ENST00000563239 TARS2Q9BW92 718 aaKnown RBP9.41□□□□□ -0.9
UBR1-204ENST00000563239 CXCL16Q9H2A7 254 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 NXF3Q9H4D5 531 aaKnown RBP9.41□□□□□ -0.9
UBR1-204ENST00000563239 GDPD2Q9HCC8 539 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 MIOSQ9NXC5 875 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 HPSEQ9Y251 543 aa9.41□□□□□ -0.9
UBR1-204ENST00000563239 RBM19Q9Y4C8 960 aaKnown RBP9.41□□□□□ -0.9
UBR1-204ENST00000563239 RALGAPA2Q2PPJ7 1873 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 NLRC5Q86WI3 1866 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 FAM237AA0A1B0GTK4 181 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 FRMD3A2A2Y4 597 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 N4BP3O15049 544 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 GRM6O15303 877 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 POLR2DO15514 142 aaKnown RBP9.4□□□□□ -0.9
UBR1-204ENST00000563239 FAM13AO94988 1023 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 RB1P06400 928 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 FOSL2P15408 326 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 PROZP22891 400 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 CMA1P23946 247 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 DNAJB1P25685 340 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 NMT1P30419 496 aaKnown RBP9.4□□□□□ -0.9
UBR1-204ENST00000563239 CTNNB1P35222 781 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 NCBP1Q09161 790 aaKnown RBP9.4□□□□□ -0.9
UBR1-204ENST00000563239 GPM6BQ13491 265 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 NOMO2Q5JPE7 1267 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 ATF7IP2Q5U623 682 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 CNNM4Q6P4Q7 775 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 HAUS6Q7Z4H7 955 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 ZNF280BQ86YH2 543 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 MYCT1Q8N699 235 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 CNNM3Q8NE01 707 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 DHX58Q96C10 678 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 PGBD4Q96DM1 585 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 ZBTB45Q96K62 511 aaPredicted RBP9.4□□□□□ -0.9
UBR1-204ENST00000563239 STRA6Q9BX79 667 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 FGFBP2Q9BYJ0 223 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 HAPLN2Q9GZV7 340 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 SCAND2PQ9GZW5 306 aaPredicted RBP9.4□□□□□ -0.9
UBR1-204ENST00000563239 RSAD1Q9HA92 442 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 PARVGQ9HBI0 331 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 TBC1D13Q9NVG8 400 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 LARSQ9P2J5 1176 aaKnown RBP9.4□□□□□ -0.9
UBR1-204ENST00000563239 PLAGL2Q9UPG8 496 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 TNFSF13BQ9Y275 285 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 ATP6V1DQ9Y5K8 247 aa9.4□□□□□ -0.9
UBR1-204ENST00000563239 TCHHQ07283 1943 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 A0A1B0GVL5 298 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 ARL5CA6NH57 179 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 MEFVO15553 781 aaPredicted RBP9.39□□□□□ -0.91
UBR1-204ENST00000563239 ACTN4O43707 911 aaKnown RBP9.39□□□□□ -0.91
UBR1-204ENST00000563239 TRAK2O60296 914 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 PPP1R37O75864 691 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 DDHD2O94830 711 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 ITGB1P05556 798 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 KRT18P05783 430 aaKnown RBP9.39□□□□□ -0.91
UBR1-204ENST00000563239 ITGA4P13612 1032 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 PFKFB1P16118 471 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 IGFBP4P22692 258 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 AKAP5P24588 427 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 PBX3P40426 434 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 SMTNP53814 917 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 GTF2BQ00403 316 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 ZC2HC1CQ53FD0 456 aaPredicted RBP9.39□□□□□ -0.91
UBR1-204ENST00000563239 GLB1LQ6UWU2 654 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 ZNF720Q7Z2F6 126 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 SFR1Q86XK3 245 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 ABI1Q8IZP0 508 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 LRRC43Q8N309 656 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 IQUBQ8NA54 791 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 KLHL23Q8NBE8 558 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 COLGALT1Q8NBJ5 622 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 MAFAQ8NHW3 353 aaPredicted RBP9.39□□□□□ -0.91
UBR1-204ENST00000563239 SPPL3Q8TCT6 385 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 P2RX5Q93086 422 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 ZFP42Q96MM3 310 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 GAD1Q99259 594 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms