RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 GBF1Q92538 1859 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 DENND3A2RUS2 1198 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 TSPAN1O60635 241 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 ZNF623O75123 536 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 HIP1RO75146 1068 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 LINC00271P0C7V0 271 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 ZSCAN20P17040 1043 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-204ENST00000563130 ATF7P17544 494 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-204ENST00000563130 TXLNAP40222 546 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 ZNF131P52739 623 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 MCM6Q14566 821 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 PPP2R5AQ15172 486 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 ZNF697Q5TEC3 545 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 CCDC73Q6ZRK6 1079 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 ZNF598Q86UK7 904 aaKnown RBP6.84□□□□□ -1.31
CNOT1-204ENST00000563130 LEO1Q8WVC0 666 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-204ENST00000563130 ZNF516Q92618 1163 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 PRIMPOLQ96LW4 560 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 DRC1Q96MC2 740 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 NKX2-4Q9H2Z4 354 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 ZNF576Q9H609 170 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 SLC28A3Q9HAS3 691 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 TMEM161AQ9NX61 479 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 DACT1Q9NYF0 836 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 ODF2LQ9ULJ1 636 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 CHD9Q3L8U1 2897 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 A0A1B0GUA9 196 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 LINC01553A4QN01 128 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 LRRIQ4A6NIV6 560 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 INO80B-WBP1J3KQ70 363 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 UPP2O95045 317 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 SSBP05455 408 aaKnown RBP eCLIP6.83□□□□□ -1.32
CNOT1-204ENST00000563130 STAG3L1P0CL83 205 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 ARF4P18085 180 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-204ENST00000563130 AXLP30530 894 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 NPTX2P47972 431 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 ME1P48163 572 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 TAP1Q03518 808 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 GIT2Q14161 759 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 UBXN11Q5T124 520 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 RRAGBQ5VZM2 374 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 RESP18Q5W5W9 173 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 ADALQ6DHV7 355 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 FAM117BQ6P1L5 589 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 Q7L0L9 218 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 ECHDC2Q86YB7 292 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 SCUBE3Q8IX30 993 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 RASSF8Q8NHQ8 419 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 SPIRE2Q8WWL2 714 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 REEP2Q9BRK0 252 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 SCAND2PQ9GZW5 306 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-204ENST00000563130 C2orf40Q9H1Z8 148 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 RNF19AQ9NV58 838 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 PRMT7Q9NVM4 692 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-204ENST00000563130 MTMR10Q9NXD2 777 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 ARHGAP28Q9P2N2 729 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 PIN4Q9Y237 131 aaKnown RBP6.83□□□□□ -1.32
CNOT1-204ENST00000563130 CHD7Q9P2D1 2997 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 NPHP3-ACAD11A0A0J9YXS1 232 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 FAM237AA0A1B0GTK4 181 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 SFI1A8K8P3 1242 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 ACKR2O00590 384 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 B4GALT5O43286 388 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 EOMESO95936 686 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 EDN1P05305 212 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 PLS3P13797 630 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 ANP32AP39687 249 aaKnown RBP6.83□□□□□ -1.32
CNOT1-204ENST00000563130 EFNA5P52803 228 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 PEX3P56589 373 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 RAD51AP2Q09MP3 1159 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 DMP1Q13316 513 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-204ENST00000563130 PPP2R2DQ66LE6 453 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 SPRED2Q7Z698 418 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 GPBP1Q86WP2 473 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 DEFB123Q8N688 67 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 CCDC51Q96ER9 411 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 IFT74Q96LB3 600 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 SPATA32Q96LK8 384 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 GUCD1Q96NT3 240 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 FIZ1Q96SL8 496 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 YME1L1Q96TA2 773 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 KIFC3Q9BVG8 833 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 FAM105AQ9NUU6 356 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 KCNG1Q9UIX4 513 aa6.83□□□□□ -1.32
CNOT1-204ENST00000563130 CNTNAP2Q9UHC6 1331 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 MYMKA6NI61 221 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 HOXA2O43364 376 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 ERLIN2O94905 339 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 CMA1P23946 247 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 RAB27AP51159 221 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 ERVK-21P61565 698 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 DHX8Q14562 1220 aaKnown RBP6.82□□□□□ -1.32
CNOT1-204ENST00000563130 GRIN2CQ14957 1233 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 MAPK6Q16659 721 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 TWF2Q6IBS0 349 aaKnown RBP6.82□□□□□ -1.32
CNOT1-204ENST00000563130 NOTUMQ6P988 496 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 TAS1R3Q7RTX0 852 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 MRPL10Q7Z7H8 261 aaKnown RBP6.82□□□□□ -1.32
CNOT1-204ENST00000563130 ZBTB8OSQ8IWT0 167 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 CMTR2Q8IYT2 770 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms