RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 SPECC1LQ69YQ0 1117 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 NCAPH2Q6IBW4 605 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 SCYL3Q8IZE3 742 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 ANKRD13CQ8N6S4 541 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 SPATA5Q8NB90 893 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 KCNH5Q8NCM2 988 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 ATP8B4Q8TF62 1192 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 HDAC11Q96DB2 347 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 ITPKCQ96DU7 683 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 SLC47A1Q96FL8 570 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 CCDC106Q9BWC9 280 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 BTBD2Q9BX70 525 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 WNT5BQ9H1J7 359 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 CRLF2Q9HC73 371 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 TRPS1Q9UHF7 1281 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 TAGLN3Q9UI15 199 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 TRIM33Q9UPN9 1127 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 NUMBLQ9Y6R0 609 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 GRIN2AQ12879 1464 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 A6NJY4 79 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 GOLGA8BA8MQT2 603 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 A8MUI8 341 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 SULT1B1O43704 296 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 SNRPAP09012 282 aaKnown RBP10.01□□□□□ -0.81
CDH1-205ENST00000562836 CPA3P15088 417 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 VAV1P15498 845 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 HADHAP40939 763 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 GALNT1Q10472 559 aaPredicted RBP10.01□□□□□ -0.81
CDH1-205ENST00000562836 SEPT6Q14141 434 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 MTF1Q14872 753 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 FAM209BQ5JX69 171 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 FAM122CQ6P4D5 195 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 OLFM4Q6UX06 510 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 DBX2Q6ZNG2 339 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 Q6ZNX1 250 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 RNF169Q8NCN4 708 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 OR6C4Q8NGE1 309 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 FBXO41Q8TF61 875 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 TSEN34Q9BSV6 310 aaKnown RBP10.01□□□□□ -0.81
CDH1-205ENST00000562836 TBC1D22BQ9NU19 505 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 FNIP2Q9P278 1114 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 VPS51Q9UID3 782 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 PRR23AA6NEV1 266 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 UBAP1LF5GYI3 381 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 YEATS4O95619 227 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 GUCA1CO95843 209 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 A1BGP04217 495 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 GLAP06280 429 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 ICAM2P13598 275 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 PSMA4P25789 261 aaKnown RBP10.01□□□□□ -0.81
CDH1-205ENST00000562836 SLC1A1P43005 524 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 PEX3P56589 373 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 PRAMEP78395 509 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 KIF23Q02241 960 aaPredicted RBP10.01□□□□□ -0.81
CDH1-205ENST00000562836 FKBP4Q02790 459 aaKnown RBP eCLIP10.01□□□□□ -0.81
CDH1-205ENST00000562836 IFI16Q16666 785 aaKnown RBP10.01□□□□□ -0.81
CDH1-205ENST00000562836 ZC2HC1CQ53FD0 456 aaPredicted RBP10.01□□□□□ -0.81
CDH1-205ENST00000562836 TRPM8Q7Z2W7 1104 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 TMPRSS9Q7Z410 1059 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 OR6P1Q8NGX9 317 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 TNFRSF25Q93038 417 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 ERLEC1Q96DZ1 483 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 STK33Q9BYT3 514 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 PITHD1Q9GZP4 211 aaPredicted RBP10.01□□□□□ -0.81
CDH1-205ENST00000562836 SLC35C2Q9NQQ7 365 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 C9orf78Q9NZ63 289 aaPredicted RBP10.01□□□□□ -0.81
CDH1-205ENST00000562836 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.01□□□□□ -0.81
CDH1-205ENST00000562836 SCAF8Q9UPN6 1271 aaKnown RBP10.01□□□□□ -0.81
CDH1-205ENST00000562836 POLHQ9Y253 713 aa10.01□□□□□ -0.81
CDH1-205ENST00000562836 PLB1Q6P1J6 1458 aa10□□□□□ -0.81
CDH1-205ENST00000562836 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10□□□□□ -0.81
CDH1-205ENST00000562836 HPGDP15428 266 aa10□□□□□ -0.81
CDH1-205ENST00000562836 TMEM11P17152 192 aa10□□□□□ -0.81
CDH1-205ENST00000562836 SFPQP23246 707 aaKnown RBP eCLIP10□□□□□ -0.81
CDH1-205ENST00000562836 TBXAS1P24557 533 aaPredicted RBP10□□□□□ -0.81
CDH1-205ENST00000562836 AXLP30530 894 aa10□□□□□ -0.81
CDH1-205ENST00000562836 ME1P48163 572 aa10□□□□□ -0.81
CDH1-205ENST00000562836 LIMK1P53667 647 aa10□□□□□ -0.81
CDH1-205ENST00000562836 CCINQ13939 588 aa10□□□□□ -0.81
CDH1-205ENST00000562836 UBE3CQ15386 1083 aa10□□□□□ -0.81
CDH1-205ENST00000562836 ASIC2Q16515 512 aa10□□□□□ -0.81
CDH1-205ENST00000562836 CWF19L2Q2TBE0 894 aaKnown RBP10□□□□□ -0.81
CDH1-205ENST00000562836 TMEM95Q3KNT9 176 aa10□□□□□ -0.81
CDH1-205ENST00000562836 TRAPPC3LQ5T215 181 aa10□□□□□ -0.81
CDH1-205ENST00000562836 PPP1R26Q5T8A7 1209 aaPredicted RBP10□□□□□ -0.81
CDH1-205ENST00000562836 ARMCX5Q6P1M9 558 aa10□□□□□ -0.81
CDH1-205ENST00000562836 PPP1R42Q7Z4L9 355 aa10□□□□□ -0.81
CDH1-205ENST00000562836 AKAP14Q86UN6 197 aa10□□□□□ -0.81
CDH1-205ENST00000562836 TBC1D21Q8IYX1 336 aa10□□□□□ -0.81
CDH1-205ENST00000562836 OR8H1Q8NGG4 311 aa10□□□□□ -0.81
CDH1-205ENST00000562836 PTCD2Q8WV60 388 aaKnown RBP10□□□□□ -0.81
CDH1-205ENST00000562836 EDEM3Q9BZQ6 932 aa10□□□□□ -0.81
CDH1-205ENST00000562836 LUZP4Q9P127 313 aa10□□□□□ -0.81
CDH1-205ENST00000562836 KCNN3Q9UGI6 736 aa10□□□□□ -0.81
CDH1-205ENST00000562836 DNM3Q9UQ16 869 aa10□□□□□ -0.81
CDH1-205ENST00000562836 LEMD3Q9Y2U8 911 aa10□□□□□ -0.81
CDH1-205ENST00000562836 A2MP01023 1474 aa10□□□□□ -0.81
CDH1-205ENST00000562836 PNMA6FA0A0J9YX94 578 aa10□□□□□ -0.81
CDH1-205ENST00000562836 FAM237AA0A1B0GTK4 181 aa10□□□□□ -0.81
CDH1-205ENST00000562836 SMCO2A6NFE2 343 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms