RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 POMCP01189 267 aa11.41□□□□□ -0.58
CLK3-205ENST00000561673 ALDH2P05091 517 aa11.41□□□□□ -0.58
CLK3-205ENST00000561673 ITGA4P13612 1032 aa11.41□□□□□ -0.58
CLK3-205ENST00000561673 ARF4P18085 180 aaPredicted RBP11.41□□□□□ -0.58
CLK3-205ENST00000561673 FXR2P51116 673 aaKnown RBP eCLIP11.41□□□□□ -0.58
CLK3-205ENST00000561673 PTGDRQ13258 359 aa11.41□□□□□ -0.58
CLK3-205ENST00000561673 PDIA5Q14554 519 aa11.41□□□□□ -0.58
CLK3-205ENST00000561673 BMS1Q14692 1282 aaKnown RBP11.41□□□□□ -0.58
CLK3-205ENST00000561673 ANKRD54Q6NXT1 300 aa11.41□□□□□ -0.58
CLK3-205ENST00000561673 SYCE2Q6PIF2 218 aa11.41□□□□□ -0.58
CLK3-205ENST00000561673 PADI6Q6TGC4 694 aa11.41□□□□□ -0.58
CLK3-205ENST00000561673 CNNM3Q8NE01 707 aa11.41□□□□□ -0.58
CLK3-205ENST00000561673 MCPH1Q8NEM0 835 aa11.41□□□□□ -0.58
CLK3-205ENST00000561673 AUTS2Q8WXX7 1259 aa11.41□□□□□ -0.58
CLK3-205ENST00000561673 SUSD6Q92537 303 aa11.41□□□□□ -0.58
CLK3-205ENST00000561673 CCDC51Q96ER9 411 aa11.41□□□□□ -0.58
CLK3-205ENST00000561673 TMX3Q96JJ7 454 aa11.41□□□□□ -0.58
CLK3-205ENST00000561673 FAM193BQ96PV7 902 aaPredicted RBP11.41□□□□□ -0.58
CLK3-205ENST00000561673 VN1R3Q9BXE9 311 aa11.41□□□□□ -0.58
CLK3-205ENST00000561673 ZBP1Q9H171 429 aa11.41□□□□□ -0.58
CLK3-205ENST00000561673 MIOSQ9NXC5 875 aa11.41□□□□□ -0.58
CLK3-205ENST00000561673 PCDHB6Q9Y5E3 794 aa11.41□□□□□ -0.58
CLK3-205ENST00000561673 WDFY4Q6ZS81 3184 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 A0A1B0GUA9 196 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 ARHGEF35A5YM69 484 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 LRRIQ4A6NIV6 560 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 LOC730098B7Z3J9 87 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 NRP1O14786 923 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 SRGAP2BP0DMP2 458 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 CTSAP10619 480 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 CYP11B2P19099 503 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 MUTP22033 750 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 CA8P35219 290 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 CCT6AP40227 531 aaKnown RBP11.4□□□□□ -0.58
CLK3-205ENST00000561673 NUBP1P53384 320 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 IL17AQ16552 155 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 CDCA2Q69YH5 1023 aaPredicted RBP11.4□□□□□ -0.58
CLK3-205ENST00000561673 CDR2LQ86X02 465 aaPredicted RBP11.4□□□□□ -0.58
CLK3-205ENST00000561673 RNF135Q8IUD6 432 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 BSNDQ8WZ55 320 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 GAD1Q99259 594 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 TMEM175Q9BSA9 504 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 APOL5Q9BWW9 433 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 PHF7Q9BWX1 381 aaPredicted RBP11.4□□□□□ -0.58
CLK3-205ENST00000561673 POLD4Q9HCU8 107 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 LRWD1Q9UFC0 647 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 FAN1Q9Y2M0 1017 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 HCFC2Q9Y5Z7 792 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 IRAK3Q9Y616 596 aa11.4□□□□□ -0.58
CLK3-205ENST00000561673 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.39□□□□□ -0.59
CLK3-205ENST00000561673 TTLL13PA6NNM8 815 aa11.39□□□□□ -0.59
CLK3-205ENST00000561673 INPPL1O15357 1258 aa11.39□□□□□ -0.59
CLK3-205ENST00000561673 HOXB8P17481 243 aaPredicted RBP11.39□□□□□ -0.59
CLK3-205ENST00000561673 AKAP5P24588 427 aa11.39□□□□□ -0.59
CLK3-205ENST00000561673 MLH1P40692 756 aa11.39□□□□□ -0.59
CLK3-205ENST00000561673 HAUS3Q68CZ6 603 aa11.39□□□□□ -0.59
CLK3-205ENST00000561673 MCTP1Q6DN14 999 aa11.39□□□□□ -0.59
CLK3-205ENST00000561673 SLC27A1Q6PCB7 646 aa11.39□□□□□ -0.59
CLK3-205ENST00000561673 COLGALT2Q8IYK4 626 aa11.39□□□□□ -0.59
CLK3-205ENST00000561673 IGSF22Q8N9C0 903 aa11.39□□□□□ -0.59
CLK3-205ENST00000561673 TMEM87AQ8NBN3 555 aa11.39□□□□□ -0.59
CLK3-205ENST00000561673 CASP10Q92851 521 aa11.39□□□□□ -0.59
CLK3-205ENST00000561673 ZFP42Q96MM3 310 aa11.39□□□□□ -0.59
CLK3-205ENST00000561673 APOL6Q9BWW8 343 aa11.39□□□□□ -0.59
CLK3-205ENST00000561673 TRIM6Q9C030 488 aaPredicted RBP11.39□□□□□ -0.59
CLK3-205ENST00000561673 FZD8Q9H461 694 aa11.39□□□□□ -0.59
CLK3-205ENST00000561673 NXF3Q9H4D5 531 aaKnown RBP11.39□□□□□ -0.59
CLK3-205ENST00000561673 UPF2Q9HAU5 1272 aaKnown RBP11.39□□□□□ -0.59
CLK3-205ENST00000561673 MUTYHQ9UIF7 546 aa11.39□□□□□ -0.59
CLK3-205ENST00000561673 KIAA1024Q9UPX6 916 aa11.39□□□□□ -0.59
CLK3-205ENST00000561673 GIT1Q9Y2X7 761 aa11.39□□□□□ -0.59
CLK3-205ENST00000561673 ARID2Q68CP9 1835 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 PRR33A8MZF0 331 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 LILRB3O75022 631 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 NPTXRO95502 500 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 GJB2P29033 226 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 OR1G1P47890 313 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 SCNN1GP51170 649 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 DSC1Q08554 894 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 GIT2Q14161 759 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 CBX2Q14781 532 aaPredicted RBP11.38□□□□□ -0.59
CLK3-205ENST00000561673 PTPN14Q15678 1187 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 FAM187BQ17R55 369 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 TPRNQ4KMQ1 711 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 HERC4Q5GLZ8 1057 aaPredicted RBP11.38□□□□□ -0.59
CLK3-205ENST00000561673 TAS1R1Q7RTX1 841 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 ZBTB8OSQ8IWT0 167 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 HS6ST3Q8IZP7 471 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 GSTCDQ8NEC7 633 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 RPGRIP1Q96KN7 1286 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 PRIMPOLQ96LW4 560 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 BHMT2Q9H2M3 363 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.38□□□□□ -0.59
CLK3-205ENST00000561673 DDX19AQ9NUU7 478 aaKnown RBP11.38□□□□□ -0.59
CLK3-205ENST00000561673 PRMT7Q9NVM4 692 aaPredicted RBP11.38□□□□□ -0.59
CLK3-205ENST00000561673 STK39Q9UEW8 545 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 CDH22Q9UJ99 828 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 USP20Q9Y2K6 914 aa11.38□□□□□ -0.59
CLK3-205ENST00000561673 PRG3Q9Y2Y8 225 aaPredicted RBP11.38□□□□□ -0.59
CLK3-205ENST00000561673 KIF3AQ9Y496 699 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms