RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 OTOP3Q7RTS5 596 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 MTERF4Q7Z6M4 381 aaKnown RBP9.38□□□□□ -0.91
PALB2-202ENST00000561514 NEK8Q86SG6 692 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 ZBTB33Q86T24 672 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 FERMT3Q86UX7 667 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 CABP7Q86V35 215 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 PIP4P2Q8N4L2 257 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 SMG8Q8ND04 991 aaKnown RBP9.38□□□□□ -0.91
PALB2-202ENST00000561514 FEZF2Q8TBJ5 459 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 URGCPQ8TCY9 931 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 TNFRSF25Q93038 417 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 CEP170P1Q96L14 293 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 NAP1L4Q99733 375 aaKnown RBP9.38□□□□□ -0.91
PALB2-202ENST00000561514 LXNQ9BS40 222 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 HERC2P3Q9BVR0 1158 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 EMILIN2Q9BXX0 1053 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 NFKBIZQ9BYH8 718 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 SMOC2Q9H3U7 446 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 RXFP1Q9HBX9 757 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 UBN1Q9NPG3 1134 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 BCCIPQ9P287 314 aaKnown RBP eCLIP9.38□□□□□ -0.91
PALB2-202ENST00000561514 INPP5FQ9Y2H2 1132 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 EP300Q09472 2414 aaPredicted RBP9.38□□□□□ -0.91
PALB2-202ENST00000561514 MYH9P35579 1960 aaKnown RBP9.37□□□□□ -0.91
PALB2-202ENST00000561514 NRP1O14786 923 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 GFRA3O60609 400 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 TSPAN1O60635 241 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 PFKFB2O60825 505 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 CDKL5O76039 1030 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 ASGR2P07307 311 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 WEE2P0C1S8 567 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 YWHABP31946 246 aaKnown RBP9.37□□□□□ -0.91
PALB2-202ENST00000561514 PTENP60484 403 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 RNASELQ05823 741 aaKnown RBP9.37□□□□□ -0.91
PALB2-202ENST00000561514 SCRN1Q12765 414 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 KIAA0319Q5VV43 1072 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 KANK3Q6NY19 840 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 TMC5Q6UXY8 1006 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 CCDC149Q6ZUS6 474 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 COLGALT2Q8IYK4 626 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 RNF149Q8NC42 400 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 OXER1Q8TDS5 423 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 HDAC7Q8WUI4 952 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 TCP11Q8WWU5 503 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 ANP32BQ92688 251 aaKnown RBP9.37□□□□□ -0.91
PALB2-202ENST00000561514 ATOH1Q92858 354 aaPredicted RBP9.37□□□□□ -0.91
PALB2-202ENST00000561514 TMEM143Q96AN5 459 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 RPS6KC1Q96S38 1066 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 HSD17B14Q9BPX1 270 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 ZSWIM4Q9H7M6 989 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 CHST7Q9NS84 486 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 FAM86C1Q9NVL1 165 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 LIMD1Q9UGP4 676 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 DBR1Q9UK59 544 aaKnown RBP9.37□□□□□ -0.91
PALB2-202ENST00000561514 DUSP12Q9UNI6 340 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 KCNJ14Q9UNX9 436 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 GPR179Q6PRD1 2367 aa9.37□□□□□ -0.91
PALB2-202ENST00000561514 CCDC194A0A1B0GVG4 234 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 PRR23AA6NEV1 266 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 TEX28O15482 410 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 N4BP1O75113 896 aaKnown RBP9.36□□□□□ -0.91
PALB2-202ENST00000561514 CTDNEP1O95476 244 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 ALDH2P05091 517 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 NPR3P17342 541 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 AOC1P19801 751 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 CLCN1P35523 988 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 DSG1Q02413 1049 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 MBTD1Q05BQ5 628 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 TDGQ13569 410 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 MXD4Q14582 209 aaPredicted RBP9.36□□□□□ -0.91
PALB2-202ENST00000561514 LONRF3Q496Y0 759 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 EARS2Q5JPH6 523 aaKnown RBP9.36□□□□□ -0.91
PALB2-202ENST00000561514 NOTUMQ6P988 496 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 OTUD6AQ7L8S5 288 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 SLFN12Q8IYM2 578 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 GSTCDQ8NEC7 633 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 ZNF707Q96C28 371 aaPredicted RBP9.36□□□□□ -0.91
PALB2-202ENST00000561514 ACSF2Q96CM8 615 aaPredicted RBP9.36□□□□□ -0.91
PALB2-202ENST00000561514 CSRNP2Q9H175 543 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 KCNK12Q9HB15 430 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 WDR6Q9NNW5 1121 aaKnown RBP9.36□□□□□ -0.91
PALB2-202ENST00000561514 MRPL17Q9NRX2 175 aaKnown RBP9.36□□□□□ -0.91
PALB2-202ENST00000561514 RGL1Q9NZL6 768 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 IGSF9Q9P2J2 1179 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 EPS15L1Q9UBC2 864 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 SSX2IPQ9Y2D8 614 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 FAN1Q9Y2M0 1017 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 GIT1Q9Y2X7 761 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 IPPQ9Y573 584 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 DENND4AQ7Z401 1863 aa9.36□□□□□ -0.91
PALB2-202ENST00000561514 ARL5CA6NH57 179 aa9.35□□□□□ -0.91
PALB2-202ENST00000561514 H0Y858 1186 aa9.35□□□□□ -0.91
PALB2-202ENST00000561514 DGAT1O75907 488 aa9.35□□□□□ -0.91
PALB2-202ENST00000561514 SLITRK3O94933 977 aa9.35□□□□□ -0.91
PALB2-202ENST00000561514 URODP06132 367 aa9.35□□□□□ -0.91
PALB2-202ENST00000561514 ADH1AP07327 375 aa9.35□□□□□ -0.91
PALB2-202ENST00000561514 SRGAP2CP0DJJ0 459 aa9.35□□□□□ -0.91
PALB2-202ENST00000561514 XBP1P17861 261 aa9.35□□□□□ -0.91
PALB2-202ENST00000561514 KLRC2P26717 231 aa9.35□□□□□ -0.91
PALB2-202ENST00000561514 ARL2P36404 184 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms