RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 C2CD2LO14523 706 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 GPAA1O43292 621 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 N4BP1O75113 896 aaKnown RBP6.14□□□□□ -1.43
HERC1-213ENST00000561359 CFBP00751 764 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 FGFR1P11362 822 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 GNAT2P19087 354 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 NCLP19338 710 aaKnown RBP6.14□□□□□ -1.43
HERC1-213ENST00000561359 STARD6P59095 220 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 IGBP1P78318 339 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 SP4Q02446 784 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 TNP2Q05952 138 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 PPARAQ07869 468 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 TMEM62Q0P6H9 643 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 GRIK4Q16099 956 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 CSRP2Q16527 193 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 TMEM266Q2M3C6 531 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 AASDHQ4L235 1098 aaPredicted RBP6.14□□□□□ -1.43
HERC1-213ENST00000561359 HSP90AB4PQ58FF6 505 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 CYFIP1Q7L576 1253 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 EDARADDQ8WWZ3 215 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 AUTS2Q8WXX7 1259 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 STAMQ92783 540 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 OSBP2Q969R2 916 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 NXPE3Q969Y0 559 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 ADAM2Q99965 735 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 PDCD2LQ9BRP1 358 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 MYL10Q9BUA6 226 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 MAF1Q9H063 256 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 NAPBQ9H115 298 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 TMX1Q9H3N1 280 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 BCAS3Q9H6U6 928 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 ATP6V0A4Q9HBG4 840 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 MRPL11Q9Y3B7 192 aaKnown RBP6.14□□□□□ -1.43
HERC1-213ENST00000561359 TRPV2Q9Y5S1 764 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 SQORQ9Y6N5 450 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 ABCB11O95342 1321 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 CNTNAP5Q8WYK1 1306 aa6.14□□□□□ -1.43
HERC1-213ENST00000561359 EIF4E1BA6NMX2 242 aaKnown RBP6.13□□□□□ -1.43
HERC1-213ENST00000561359 PATL2C9JE40 543 aaKnown RBP6.13□□□□□ -1.43
HERC1-213ENST00000561359 EML1O00423 815 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 MGEA5O60502 916 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 FOXD2O60548 495 aaPredicted RBP6.13□□□□□ -1.43
HERC1-213ENST00000561359 RPLP2P05387 115 aaKnown RBP6.13□□□□□ -1.43
HERC1-213ENST00000561359 FAM157BP0CG42 384 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 PDHBP11177 359 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 TOP1P11387 765 aaKnown RBP6.13□□□□□ -1.43
HERC1-213ENST00000561359 ATP5JP18859 108 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 MARK3P27448 753 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 MAGEA9P43362 315 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 ZNF543Q08ER8 600 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 DPYDQ12882 1025 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 SNW1Q13573 536 aaKnown RBP6.13□□□□□ -1.43
HERC1-213ENST00000561359 NEDD9Q14511 834 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 SOWAHCQ53LP3 525 aaPredicted RBP6.13□□□□□ -1.43
HERC1-213ENST00000561359 SH3PXD2AQ5TCZ1 1133 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 SAMD5Q5TGI4 173 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 METTL7BQ6UX53 244 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 SLC24A5Q71RS6 500 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 VSIG10LQ86VR7 867 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 PPFIBP1Q86W92 1011 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 IFNL3Q8IZI9 196 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 ABI1Q8IZP0 508 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 VPS52Q8N1B4 723 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 TMEM57Q8N5G2 664 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 KCTD17Q8N5Z5 321 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 CELF5Q8N6W0 485 aaKnown RBP6.13□□□□□ -1.43
HERC1-213ENST00000561359 SLC22A17Q8WUG5 538 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 SCG3Q8WXD2 468 aaKnown RBP6.13□□□□□ -1.43
HERC1-213ENST00000561359 ZCCHC14Q8WYQ9 949 aaKnown RBP6.13□□□□□ -1.43
HERC1-213ENST00000561359 NELL1Q92832 810 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 TMEM47Q9BQJ4 181 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 FAM126AQ9BYI3 521 aaPredicted RBP6.13□□□□□ -1.43
HERC1-213ENST00000561359 UBA5Q9GZZ9 404 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 TMEM117Q9H0C3 514 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 SLC2A4RGQ9NR83 387 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 TOMM22Q9NS69 142 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 C1orf112Q9NSG2 853 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 MARK1Q9P0L2 795 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 ANKFY1Q9P2R3 1169 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 EPS15L1Q9UBC2 864 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 GINS2Q9Y248 185 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 MTF2Q9Y483 593 aaPredicted RBP6.13□□□□□ -1.43
HERC1-213ENST00000561359 IGSF9BQ9UPX0 1349 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 ITPR1Q14643 2758 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 SDK1Q7Z5N4 2213 aa6.13□□□□□ -1.43
HERC1-213ENST00000561359 MYO18BQ8IUG5 2567 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 MBLAC1A4D2B0 266 aaPredicted RBP6.12□□□□□ -1.43
HERC1-213ENST00000561359 SHISA8B8ZZ34 492 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 C9IYK1 514 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 KCNK5O95279 499 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 GOLGA8HP0CJ92 632 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 ARAFP10398 606 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 SPINK2P20155 84 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 CCND2P30279 289 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 ALDH7A1P49419 539 aaKnown RBP6.12□□□□□ -1.43
HERC1-213ENST00000561359 METAP2P50579 478 aaKnown RBP eCLIP6.12□□□□□ -1.43
HERC1-213ENST00000561359 NRLP54845 237 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 GPC5P78333 572 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 SIM2Q14190 667 aaPredicted RBP6.12□□□□□ -1.43
HERC1-213ENST00000561359 PGM5Q15124 567 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms