RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 NPR3P17342 541 aa13.2□□□□□ -0.3
CARMIL3-204ENST00000561354 AXLP30530 894 aa13.2□□□□□ -0.3
CARMIL3-204ENST00000561354 DSC1Q08554 894 aa13.2□□□□□ -0.3
CARMIL3-204ENST00000561354 EMC2Q15006 297 aa13.2□□□□□ -0.3
CARMIL3-204ENST00000561354 ELMSAN1Q6PJG2 1045 aa13.2□□□□□ -0.3
CARMIL3-204ENST00000561354 FLCNQ8NFG4 579 aa13.2□□□□□ -0.3
CARMIL3-204ENST00000561354 HAS1Q92839 578 aa13.2□□□□□ -0.3
CARMIL3-204ENST00000561354 CCDC51Q96ER9 411 aa13.2□□□□□ -0.3
CARMIL3-204ENST00000561354 LXNQ9BS40 222 aa13.2□□□□□ -0.3
CARMIL3-204ENST00000561354 ZSWIM4Q9H7M6 989 aa13.2□□□□□ -0.3
CARMIL3-204ENST00000561354 RXFP1Q9HBX9 757 aa13.2□□□□□ -0.3
CARMIL3-204ENST00000561354 KCNJ14Q9UNX9 436 aa13.2□□□□□ -0.3
CARMIL3-204ENST00000561354 IPPQ9Y573 584 aa13.2□□□□□ -0.3
CARMIL3-204ENST00000561354 TEX28O15482 410 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 TSPAN1O60635 241 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 CDKL5O76039 1030 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 PAPLNO95428 1278 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 XBP1P17861 261 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 AK2P54819 239 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 PTENP60484 403 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 FOXK2Q01167 660 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 POU5F1BQ06416 359 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 SPIRE1Q08AE8 756 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 NCBP1Q09161 790 aaKnown RBP13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 STK3Q13188 491 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 MXD4Q14582 209 aaPredicted RBP13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 XKR9Q5GH70 373 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 KIAA0319Q5VV43 1072 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 IFNLR1Q8IU57 520 aaPredicted RBP13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 CCDC105Q8IYK2 499 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 GPR65Q8IYL9 337 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 HDAC7Q8WUI4 952 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 STAMQ92783 540 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 NKD2Q969F2 451 aaPredicted RBP13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 GAD1Q99259 594 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 MTRQ99707 1265 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 RTP3Q9BQQ7 232 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 LARP6Q9BRS8 491 aaKnown RBP13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 WDR6Q9NNW5 1121 aaKnown RBP13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 MAN1C1Q9NR34 630 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 RGL1Q9NZL6 768 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 WNT16Q9UBV4 365 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 C2orf16Q68DN1 1984 aa13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 ZFHX2Q9C0A1 2572 aaPredicted RBP13.19□□□□□ -0.3
CARMIL3-204ENST00000561354 STK36Q9NRP7 1315 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 CCDC195A0A1B0GUA6 201 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 ARL5CA6NH57 179 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 C2CD2LO14523 706 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 PI15O43692 258 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 MARCH6O60337 910 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 CCNT1O60563 726 aaKnown RBP13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 GLUD1P00367 558 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 OR1G1P47890 313 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 GLUD2P49448 558 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 DSG1Q02413 1049 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 TFDP1Q14186 410 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 NOTUMQ6P988 496 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 TAS1R1Q7RTX1 841 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 SLFN12Q8IYM2 578 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 NXPE3Q969Y0 559 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 EIF2AQ9BY44 585 aaKnown RBP13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 CSRNP2Q9H175 543 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 RNF39Q9H2S5 420 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 XPNPEP1Q9NQW7 623 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 CHST7Q9NS84 486 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 BMP2KQ9NSY1 1161 aaPredicted RBP13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 EPS15L1Q9UBC2 864 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 FBXL21Q9UKT6 434 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 GIT1Q9Y2X7 761 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 PRG3Q9Y2Y8 225 aaPredicted RBP13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 PTPRZ1P23471 2315 aaPredicted RBP13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 USP34Q70CQ2 3546 aa13.18□□□□□ -0.3
CARMIL3-204ENST00000561354 ZBTB39O15060 712 aa13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 N4BP1O75113 896 aaKnown RBP13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 NR1I2O75469 434 aa13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 SLITRK3O94933 977 aa13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 BAG4O95429 457 aaKnown RBP13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 MLH1P40692 756 aa13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 SCRN1Q12765 414 aa13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 CTTNQ14247 550 aaKnown RBP13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 NCAPH2Q6IBW4 605 aa13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 PIK3AP1Q6ZUJ8 805 aa13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 FRMD5Q7Z6J6 570 aa13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 HACE1Q8IYU2 909 aa13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 SIX5Q8N196 739 aa13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 DYDC2Q96IM9 177 aa13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 COLEC11Q9BWP8 271 aa13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 NFKBIZQ9BYH8 718 aa13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 PLEKHA4Q9H4M7 779 aa13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 PDRG1Q9NUG6 133 aa13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 MIOSQ9NXC5 875 aa13.17□□□□□ -0.3
CARMIL3-204ENST00000561354 CLUHO75153 1309 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 INO80B-WBP1J3KQ70 363 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 DGAT1O75907 488 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 LYPLA2O95372 231 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 GBP2P32456 591 aaPredicted RBP13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 ARL2P36404 184 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 SCNN1GP51170 649 aa13.16□□□□□ -0.3
CARMIL3-204ENST00000561354 CYP4A11Q02928 519 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms