RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 NRIP1P48552 1158 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 DNM2P50570 870 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 LAMTOR4Q0VGL1 99 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 ADAM15Q13444 863 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 TRIM29Q14134 588 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 XKR9Q5GH70 373 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 PLPP4Q5VZY2 271 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 TWF2Q6IBS0 349 aaKnown RBP8.26□□□□□ -1.09
ZEB1-223ENST00000561304 KCNT2Q6UVM3 1135 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 CATSPER4Q7RTX7 472 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 RBM23Q86U06 439 aaKnown RBP8.26□□□□□ -1.09
ZEB1-223ENST00000561304 TMEM173Q86WV6 379 aaPredicted RBP8.26□□□□□ -1.09
ZEB1-223ENST00000561304 TPH2Q8IWU9 490 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 THNSL1Q8IYQ7 743 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 LRRC43Q8N309 656 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 PRR7Q8TB68 274 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 ASAP3Q8TDY4 903 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 SLC7A3Q8WY07 619 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 C8orf76Q96K31 380 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 MSLNLQ96KJ4 702 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 HSD17B14Q9BPX1 270 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 ZSWIM4Q9H7M6 989 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 C11orf16Q9NQ32 467 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 TLR9Q9NR96 1032 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 AGPAT5Q9NUQ2 364 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 BARX2Q9UMQ3 279 aaPredicted RBP8.26□□□□□ -1.09
ZEB1-223ENST00000561304 PCDHA12Q9UN75 941 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 PCDHB12Q9Y5F1 795 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 CITO14578 2027 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 KMT2EQ8IZD2 1858 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 MYO10Q9HD67 2058 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 FAM86C2PA6NEL3 165 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 NT5C1B-RDH14C9J2C7 533 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 PER2O15055 1255 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 MBTPS2O43462 519 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 MED24O75448 989 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 LYPLA2O95372 231 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 BAG4O95429 457 aaKnown RBP8.25□□□□□ -1.09
ZEB1-223ENST00000561304 SPATA31C1P0DKV0 1188 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 LAG3P18627 525 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 HOXA11P31270 313 aaPredicted RBP8.25□□□□□ -1.09
ZEB1-223ENST00000561304 RFC5P40937 340 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 RBM25P49756 843 aaKnown RBP8.25□□□□□ -1.09
ZEB1-223ENST00000561304 AFF1P51825 1210 aaKnown RBP8.25□□□□□ -1.09
ZEB1-223ENST00000561304 ZP2Q05996 745 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 CAPSQ13938 189 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 UBXN11Q5T124 520 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 FAM43BQ6ZT52 329 aaPredicted RBP8.25□□□□□ -1.09
ZEB1-223ENST00000561304 FERMT3Q86UX7 667 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 SLC39A11Q8N1S5 342 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 EFHBQ8N7U6 833 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 FBXO18Q8NFZ0 1043 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 PIGOQ8TEQ8 1089 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 BCL7CQ8WUZ0 217 aaPredicted RBP8.25□□□□□ -1.09
ZEB1-223ENST00000561304 PSPC1Q8WXF1 523 aaKnown RBP8.25□□□□□ -1.09
ZEB1-223ENST00000561304 MRPS27Q92552 414 aaKnown RBP8.25□□□□□ -1.09
ZEB1-223ENST00000561304 LLPHQ9BRT6 129 aaKnown RBP8.25□□□□□ -1.09
ZEB1-223ENST00000561304 FAM105AQ9NUU6 356 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 DACT1Q9NYF0 836 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 DOCK6Q96HP0 2047 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 ANK1P16157 1881 aa8.25□□□□□ -1.09
ZEB1-223ENST00000561304 HIDE1A8MVS5 230 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 NRG2O14511 850 aaPredicted RBP8.24□□□□□ -1.09
ZEB1-223ENST00000561304 GFRA3O60609 400 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 TSPAN1O60635 241 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 DKC1O60832 514 aaKnown RBP eCLIP8.24□□□□□ -1.09
ZEB1-223ENST00000561304 EOMESO95936 686 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 RARRES1P49788 294 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 NDUFV1P49821 464 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 TOB1P50616 345 aaPredicted RBP8.24□□□□□ -1.09
ZEB1-223ENST00000561304 BCAR1P56945 870 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 CDC42EP1Q00587 391 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 PLCB3Q01970 1234 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 UBE3AQ05086 875 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 SMAD4Q13485 552 aaKnown RBP8.24□□□□□ -1.09
ZEB1-223ENST00000561304 ZNF174Q15697 407 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 SMAD2Q15796 467 aaKnown RBP8.24□□□□□ -1.09
ZEB1-223ENST00000561304 DUSP6Q16828 381 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 PTPRNQ16849 979 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 AGMOQ6ZNB7 445 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 ABI1Q8IZP0 508 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 GJD3Q8N144 294 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 RNF149Q8NC42 400 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 SMRP1Q8NCR6 262 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 SMG8Q8ND04 991 aaKnown RBP8.24□□□□□ -1.09
ZEB1-223ENST00000561304 FEZF2Q8TBJ5 459 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 CPB2Q96IY4 423 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 ZNF558Q96NG5 402 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 JPH2Q9BR39 696 aaPredicted RBP8.24□□□□□ -1.09
ZEB1-223ENST00000561304 TRAIPQ9BWF2 469 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 VN1R3Q9BXE9 311 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 FAM117AQ9C073 453 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 NRDE2Q9H7Z3 1164 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 TLE6Q9H808 572 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 GPRC5CQ9NQ84 441 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 CHST12Q9NRB3 414 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 SH2B1Q9NRF2 756 aaPredicted RBP8.24□□□□□ -1.09
ZEB1-223ENST00000561304 AAASQ9NRG9 546 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 TBC1D13Q9NVG8 400 aa8.24□□□□□ -1.09
ZEB1-223ENST00000561304 DNAJB4Q9UDY4 337 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms