RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 NOTUMQ6P988 496 aa30.08■■■□□ 2.41
SNRPA1-215ENST00000561187 CABP7Q86V35 215 aa30.08■■■□□ 2.41
SNRPA1-215ENST00000561187 PRSS33Q8NF86 280 aa30.08■■■□□ 2.41
SNRPA1-215ENST00000561187 SLC22A17Q8WUG5 538 aa30.08■■■□□ 2.41
SNRPA1-215ENST00000561187 RIPOR3Q96MK2 946 aa30.08■■■□□ 2.41
SNRPA1-215ENST00000561187 ZFP42Q96MM3 310 aa30.08■■■□□ 2.41
SNRPA1-215ENST00000561187 NECTIN4Q96NY8 510 aa30.08■■■□□ 2.41
SNRPA1-215ENST00000561187 GPRC5CQ9NQ84 441 aa30.08■■■□□ 2.41
SNRPA1-215ENST00000561187 DBR1Q9UK59 544 aaKnown RBP30.08■■■□□ 2.41
SNRPA1-215ENST00000561187 IRAK3Q9Y616 596 aa30.08■■■□□ 2.41
SNRPA1-215ENST00000561187 F8W810 466 aa30.07■■■□□ 2.4
SNRPA1-215ENST00000561187 PDGFBP01127 241 aaPredicted RBP30.07■■■□□ 2.4
SNRPA1-215ENST00000561187 MYBP10242 640 aa30.07■■■□□ 2.4
SNRPA1-215ENST00000561187 GLRA2P23416 452 aa30.07■■■□□ 2.4
SNRPA1-215ENST00000561187 KLRC2P26717 231 aa30.07■■■□□ 2.4
SNRPA1-215ENST00000561187 MTHFRP42898 656 aa30.07■■■□□ 2.4
SNRPA1-215ENST00000561187 RARRES1P49788 294 aa30.07■■■□□ 2.4
SNRPA1-215ENST00000561187 BMP8AQ7Z5Y6 402 aa30.07■■■□□ 2.4
SNRPA1-215ENST00000561187 KREMEN2Q8NCW0 462 aa30.07■■■□□ 2.4
SNRPA1-215ENST00000561187 ASIC4Q96FT7 647 aa30.07■■■□□ 2.4
SNRPA1-215ENST00000561187 TRIM6Q9C030 488 aaPredicted RBP30.07■■■□□ 2.4
SNRPA1-215ENST00000561187 NXF3Q9H4D5 531 aaKnown RBP30.07■■■□□ 2.4
SNRPA1-215ENST00000561187 MARCH5Q9NX47 278 aa30.07■■■□□ 2.4
SNRPA1-215ENST00000561187 CARNS1A5YM72 827 aa30.06■■■□□ 2.4
SNRPA1-215ENST00000561187 ARL5CA6NH57 179 aa30.06■■■□□ 2.4
SNRPA1-215ENST00000561187 DGAT1O75907 488 aa30.06■■■□□ 2.4
SNRPA1-215ENST00000561187 ALDH2P05091 517 aa30.06■■■□□ 2.4
SNRPA1-215ENST00000561187 ASGR2P07307 311 aa30.06■■■□□ 2.4
SNRPA1-215ENST00000561187 VCPP55072 806 aaKnown RBP30.06■■■□□ 2.4
SNRPA1-215ENST00000561187 GIT2Q14161 759 aa30.06■■■□□ 2.4
SNRPA1-215ENST00000561187 CCDC83Q8IWF9 413 aa30.06■■■□□ 2.4
SNRPA1-215ENST00000561187 FBXL6Q8N531 539 aa30.06■■■□□ 2.4
SNRPA1-215ENST00000561187 KLHL5Q96PQ7 755 aa30.06■■■□□ 2.4
SNRPA1-215ENST00000561187 TMEM175Q9BSA9 504 aa30.06■■■□□ 2.4
SNRPA1-215ENST00000561187 ANKEF1Q9NU02 776 aa30.06■■■□□ 2.4
SNRPA1-215ENST00000561187 KANSL3Q9P2N6 904 aa30.06■■■□□ 2.4
SNRPA1-215ENST00000561187 KMT2EQ8IZD2 1858 aa30.06■■■□□ 2.4
SNRPA1-215ENST00000561187 LYPLA2O95372 231 aa30.05■■■□□ 2.4
SNRPA1-215ENST00000561187 CNPP09543 421 aaKnown RBP30.05■■■□□ 2.4
SNRPA1-215ENST00000561187 ARF4P18085 180 aaPredicted RBP30.05■■■□□ 2.4
SNRPA1-215ENST00000561187 ARL2P36404 184 aa30.05■■■□□ 2.4
SNRPA1-215ENST00000561187 MRE11P49959 708 aa30.05■■■□□ 2.4
SNRPA1-215ENST00000561187 AMHR2Q16671 573 aa30.05■■■□□ 2.4
SNRPA1-215ENST00000561187 KIAA1841Q6NSI8 718 aa30.05■■■□□ 2.4
SNRPA1-215ENST00000561187 TDRD5Q8NAT2 981 aaKnown RBP30.05■■■□□ 2.4
SNRPA1-215ENST00000561187 MTMR9Q96QG7 549 aa30.05■■■□□ 2.4
SNRPA1-215ENST00000561187 EMILIN2Q9BXX0 1053 aa30.05■■■□□ 2.4
SNRPA1-215ENST00000561187 CSRNP2Q9H175 543 aa30.05■■■□□ 2.4
SNRPA1-215ENST00000561187 MIOSQ9NXC5 875 aa30.05■■■□□ 2.4
SNRPA1-215ENST00000561187 MYO10Q9HD67 2058 aa30.05■■■□□ 2.4
SNRPA1-215ENST00000561187 LRRIQ4A6NIV6 560 aa30.04■■■□□ 2.4
SNRPA1-215ENST00000561187 NPTXRO95502 500 aa30.04■■■□□ 2.4
SNRPA1-215ENST00000561187 URODP06132 367 aa30.04■■■□□ 2.4
SNRPA1-215ENST00000561187 AKAP5P24588 427 aa30.04■■■□□ 2.4
SNRPA1-215ENST00000561187 NCBP1Q09161 790 aaKnown RBP30.04■■■□□ 2.4
SNRPA1-215ENST00000561187 TAS1R1Q7RTX1 841 aa30.04■■■□□ 2.4
SNRPA1-215ENST00000561187 COLGALT2Q8IYK4 626 aa30.04■■■□□ 2.4
SNRPA1-215ENST00000561187 PHOX2BQ99453 314 aa30.04■■■□□ 2.4
SNRPA1-215ENST00000561187 KCNH6Q9H252 994 aa30.04■■■□□ 2.4
SNRPA1-215ENST00000561187 TDRD15B5MCY1 1934 aaKnown RBP30.03■■■□□ 2.4
SNRPA1-215ENST00000561187 AXLP30530 894 aa30.03■■■□□ 2.4
SNRPA1-215ENST00000561187 ATAT1Q5SQI0 421 aa30.03■■■□□ 2.4
SNRPA1-215ENST00000561187 CNNM3Q8NE01 707 aa30.03■■■□□ 2.4
SNRPA1-215ENST00000561187 SFXN1Q9H9B4 322 aa30.03■■■□□ 2.4
SNRPA1-215ENST00000561187 MRPL17Q9NRX2 175 aaKnown RBP30.03■■■□□ 2.4
SNRPA1-215ENST00000561187 MED24O75448 989 aa30.02■■■□□ 2.4
SNRPA1-215ENST00000561187 BRD1O95696 1058 aa30.02■■■□□ 2.4
SNRPA1-215ENST00000561187 CLCN4P51793 760 aa30.02■■■□□ 2.4
SNRPA1-215ENST00000561187 PPFIBP1Q86W92 1011 aa30.02■■■□□ 2.4
SNRPA1-215ENST00000561187 RABGGTAQ92696 567 aa30.02■■■□□ 2.4
SNRPA1-215ENST00000561187 CCDC51Q96ER9 411 aa30.02■■■□□ 2.4
SNRPA1-215ENST00000561187 B3GALT6Q96L58 329 aa30.02■■■□□ 2.4
SNRPA1-215ENST00000561187 HERC2P3Q9BVR0 1158 aa30.02■■■□□ 2.4
SNRPA1-215ENST00000561187 UBN1Q9NPG3 1134 aa30.02■■■□□ 2.4
SNRPA1-215ENST00000561187 KLK14Q9P0G3 267 aa30.02■■■□□ 2.4
SNRPA1-215ENST00000561187 CACNG4Q9UBN1 327 aa30.02■■■□□ 2.4
SNRPA1-215ENST00000561187 SOD2P04179 222 aa30.01■■■□□ 2.39
SNRPA1-215ENST00000561187 SPATA31C1P0DKV0 1188 aa30.01■■■□□ 2.39
SNRPA1-215ENST00000561187 MTMR3Q13615 1198 aa30.01■■■□□ 2.39
SNRPA1-215ENST00000561187 SAFBQ15424 915 aaKnown RBP eCLIP30.01■■■□□ 2.39
SNRPA1-215ENST00000561187 ZNF174Q15697 407 aa30.01■■■□□ 2.39
SNRPA1-215ENST00000561187 POTEGQ6S5H5 508 aa30.01■■■□□ 2.39
SNRPA1-215ENST00000561187 IFNLR1Q8IU57 520 aaPredicted RBP30.01■■■□□ 2.39
SNRPA1-215ENST00000561187 LIMD1Q9UGP4 676 aa30.01■■■□□ 2.39
SNRPA1-215ENST00000561187 SORCS3Q9UPU3 1222 aa30.01■■■□□ 2.39
SNRPA1-215ENST00000561187 DENND4AQ7Z401 1863 aa30■■■□□ 2.39
SNRPA1-215ENST00000561187 LIG1P18858 919 aa30■■■□□ 2.39
SNRPA1-215ENST00000561187 CATSPER3Q86XQ3 398 aa30■■■□□ 2.39
SNRPA1-215ENST00000561187 C8orf76Q96K31 380 aa30■■■□□ 2.39
SNRPA1-215ENST00000561187 PARP2Q9UGN5 583 aa30■■■□□ 2.39
SNRPA1-215ENST00000561187 C2orf16Q68DN1 1984 aa30■■■□□ 2.39
SNRPA1-215ENST00000561187 PLXNA3P51805 1871 aa29.99■■■□□ 2.39
SNRPA1-215ENST00000561187 PCBP1Q15365 356 aaKnown RBP eCLIP29.99■■■□□ 2.39
SNRPA1-215ENST00000561187 MAN1C1Q9NR34 630 aa29.99■■■□□ 2.39
SNRPA1-215ENST00000561187 LILRB3O75022 631 aa29.98■■■□□ 2.39
SNRPA1-215ENST00000561187 GLUD2P49448 558 aa29.98■■■□□ 2.39
SNRPA1-215ENST00000561187 DSC1Q08554 894 aa29.98■■■□□ 2.39
SNRPA1-215ENST00000561187 TMEM132AQ24JP5 1023 aa29.98■■■□□ 2.39
SNRPA1-215ENST00000561187 CCDC149Q6ZUS6 474 aa29.98■■■□□ 2.39
SNRPA1-215ENST00000561187 GLYCTKQ8IVS8 523 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms