RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 GALNSP34059 522 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 GJA4P35212 333 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 ACTN2P35609 894 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 SERPINF1P36955 418 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 MSH2P43246 934 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 TNNT2P45379 298 aaPredicted RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 POLD2P49005 469 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 LMAN1P49257 510 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 FNTBP49356 437 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 FXR1P51114 621 aaKnown RBP eCLIP2.29□□□□□ -2.04
RTF1-207ENST00000561076 AFF1P51825 1210 aaKnown RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 MAP2K6P52564 334 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 MANFP55145 182 aaKnown RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 CASP6P55212 293 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 PER3P56645 1201 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 NRG3P56975 720 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 PCBP3P57721 371 aaKnown RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 DCAF7P61962 342 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 CTBSQ01459 385 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 FMO1Q01740 532 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 NRG1Q02297 640 aaPredicted RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 PTSQ03393 145 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 UBXN1Q04323 297 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 PPARAQ07869 468 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 ADCY2Q08462 1091 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 FOXO1Q12778 655 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 MALLQ13021 153 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 CDC16Q13042 620 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 MAMLD1Q13495 774 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 SNW1Q13573 536 aaKnown RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 TRIM29Q14134 588 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 PTK2BQ14289 1009 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 NOMO1Q15155 1222 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 EPHA7Q15375 998 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 CHRNA2Q15822 529 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 SLC14A2Q15849 920 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 MEA1Q16626 185 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 DBN1Q16643 649 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 IFI16Q16666 785 aaKnown RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 FAM110CQ1W6H9 321 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 TMEM266Q2M3C6 531 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 SLC35G1Q2M3R5 365 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 ELOA3BQ3SY89 546 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 FAM26FQ5R3K3 315 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 CC2D1BQ5T0F9 858 aaKnown RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 ATPAF1Q5TC12 328 aaPredicted RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 ANGEL2Q5VTE6 544 aaKnown RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 KLHDC7AQ5VTJ3 777 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 BTBD8Q5XKL5 378 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 FAM205BPQ63HN1 556 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 CPZQ66K79 652 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 SULT6B1Q6IMI4 303 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 RCSD1Q6JBY9 416 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 HHIPL2Q6UWX4 724 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 LMBR1LQ6UX01 489 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 ZNF783Q6ZMS7 281 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 SYDE1Q6ZW31 735 aaPredicted RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 HEATR3Q7Z4Q2 680 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 GALNTL5Q7Z4T8 443 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 TMC3Q7Z5M5 1100 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 SDCCAG8Q86SQ7 713 aaPredicted RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 NBPF11Q86T75 865 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 RTN4RL1Q86UN2 441 aaPredicted RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 TTC30AQ86WT1 665 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 CPNE8Q86YQ8 564 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 GALNT13Q8IUC8 556 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 TMTC1Q8IUR5 882 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 RHOT1Q8IXI2 618 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 PRR18Q8N4B5 295 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 ARL6IP6Q8N6S5 226 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 ZNF655Q8N720 491 aaPredicted RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 ZNF713Q8N859 430 aaPredicted RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 ANKRD52Q8NB46 1076 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 ELOA3Q8NG57 546 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 OR6B3Q8NGW1 331 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 OR14C36Q8NHC7 312 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 DNAJB8Q8NHS0 232 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 SMCR8Q8TEV9 937 aaPredicted RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 ASB12Q8WXK4 309 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 RFFLQ8WZ73 363 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 TBC1D5Q92609 795 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 HTRA1Q92743 480 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 KAT5Q92993 513 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 ZUFSPQ96AP4 578 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 LRRC46Q96FV0 321 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 YTHDC1Q96MU7 727 aaKnown RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 JAKMIP1Q96N16 626 aaKnown RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 FCRL3Q96P31 734 aaPredicted RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 KCNC2Q96PR1 638 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 ORAI2Q96SN7 254 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 IWS1Q96ST2 819 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 MMP19Q99542 508 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 LRFN3Q9BTN0 628 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 BRIP1Q9BX63 1249 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 MAGEB5Q9BZ81 275 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 C22orf23Q9BZE7 217 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 BRD8Q9H0E9 1235 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 RNF208Q9H0X6 261 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 POFUT1Q9H488 388 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 TAF1DQ9H5J8 278 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms