RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 DSC1Q08554 894 aa20.75■□□□□ 0.91
TPM1-226ENST00000560959 RIN2Q8WYP3 895 aaPredicted RBP20.75■□□□□ 0.91
TPM1-226ENST00000560959 PHKBQ93100 1093 aa20.75■□□□□ 0.91
TPM1-226ENST00000560959 GJA10Q969M2 543 aa20.75■□□□□ 0.91
TPM1-226ENST00000560959 SHDQ96IW2 340 aa20.75■□□□□ 0.91
TPM1-226ENST00000560959 MBOAT7Q96N66 472 aa20.75■□□□□ 0.91
TPM1-226ENST00000560959 FNIP2Q9P278 1114 aa20.75■□□□□ 0.91
TPM1-226ENST00000560959 C2orf16Q68DN1 1984 aa20.75■□□□□ 0.91
TPM1-226ENST00000560959 ASAP2O43150 1006 aa20.74■□□□□ 0.91
TPM1-226ENST00000560959 GAS2O43903 313 aaKnown RBP20.74■□□□□ 0.91
TPM1-226ENST00000560959 NR1I2O75469 434 aa20.74■□□□□ 0.91
TPM1-226ENST00000560959 RFPL2O75678 378 aa20.74■□□□□ 0.91
TPM1-226ENST00000560959 DCNP07585 359 aaKnown RBP20.74■□□□□ 0.91
TPM1-226ENST00000560959 IFNAR1P17181 557 aa20.74■□□□□ 0.91
TPM1-226ENST00000560959 AXLP30530 894 aa20.74■□□□□ 0.91
TPM1-226ENST00000560959 OR1G1P47890 313 aa20.74■□□□□ 0.91
TPM1-226ENST00000560959 LILRA6Q6PI73 481 aa20.74■□□□□ 0.91
TPM1-226ENST00000560959 DCLRE1AQ6PJP8 1040 aa20.74■□□□□ 0.91
TPM1-226ENST00000560959 ETNPPLQ8TBG4 499 aa20.74■□□□□ 0.91
TPM1-226ENST00000560959 PRPF31Q8WWY3 499 aaKnown RBP20.74■□□□□ 0.91
TPM1-226ENST00000560959 PSPC1Q8WXF1 523 aaKnown RBP20.74■□□□□ 0.91
TPM1-226ENST00000560959 PRKD2Q9BZL6 878 aa20.74■□□□□ 0.91
TPM1-226ENST00000560959 DHX33Q9H6R0 707 aaKnown RBP20.74■□□□□ 0.91
TPM1-226ENST00000560959 PIDD1Q9HB75 910 aa20.74■□□□□ 0.91
TPM1-226ENST00000560959 ITGA4P13612 1032 aa20.73■□□□□ 0.91
TPM1-226ENST00000560959 HTR4Q13639 388 aa20.73■□□□□ 0.91
TPM1-226ENST00000560959 ZNF528Q3MIS6 628 aa20.73■□□□□ 0.91
TPM1-226ENST00000560959 Q6ZUG5 572 aa20.73■□□□□ 0.91
TPM1-226ENST00000560959 SMG8Q8ND04 991 aaKnown RBP20.73■□□□□ 0.91
TPM1-226ENST00000560959 BRF1Q92994 677 aa20.73■□□□□ 0.91
TPM1-226ENST00000560959 CCDC51Q96ER9 411 aa20.73■□□□□ 0.91
TPM1-226ENST00000560959 MINDY3Q9H8M7 445 aa20.73■□□□□ 0.91
TPM1-226ENST00000560959 VPS54Q9P1Q0 977 aa20.73■□□□□ 0.91
TPM1-226ENST00000560959 PRG3Q9Y2Y8 225 aaPredicted RBP20.73■□□□□ 0.91
TPM1-226ENST00000560959 ARL5CA6NH57 179 aa20.72■□□□□ 0.91
TPM1-226ENST00000560959 SRGAP2CP0DJJ0 459 aa20.72■□□□□ 0.91
TPM1-226ENST00000560959 RFC5P40937 340 aa20.72■□□□□ 0.91
TPM1-226ENST00000560959 QARSP47897 775 aaKnown RBP20.72■□□□□ 0.91
TPM1-226ENST00000560959 NLRP5P59047 1200 aa20.72■□□□□ 0.91
TPM1-226ENST00000560959 LAMTOR4Q0VGL1 99 aa20.72■□□□□ 0.91
TPM1-226ENST00000560959 BMP2KLQ5H9B9 411 aa20.72■□□□□ 0.91
TPM1-226ENST00000560959 SPECC1Q5M775 1068 aa20.72■□□□□ 0.91
TPM1-226ENST00000560959 FAM177A1Q8N128 213 aaPredicted RBP20.72■□□□□ 0.91
TPM1-226ENST00000560959 SUMF1Q8NBK3 374 aa20.72■□□□□ 0.91
TPM1-226ENST00000560959 PJA1Q8NG27 643 aa20.72■□□□□ 0.91
TPM1-226ENST00000560959 KCNB2Q92953 911 aa20.72■□□□□ 0.91
TPM1-226ENST00000560959 HINFPQ9BQA5 517 aa20.72■□□□□ 0.91
TPM1-226ENST00000560959 COLEC11Q9BWP8 271 aa20.72■□□□□ 0.91
TPM1-226ENST00000560959 AGXT2Q9BYV1 514 aa20.72■□□□□ 0.91
TPM1-226ENST00000560959 PCDHA4Q9UN74 947 aa20.72■□□□□ 0.91
TPM1-226ENST00000560959 OTOGLQ3ZCN5 2332 aa20.72■□□□□ 0.91
TPM1-226ENST00000560959 TGM5O43548 720 aa20.71■□□□□ 0.91
TPM1-226ENST00000560959 SDHBP21912 280 aa20.71■□□□□ 0.91
TPM1-226ENST00000560959 CREMQ03060 361 aa20.71■□□□□ 0.91
TPM1-226ENST00000560959 PPP2R5CQ13362 524 aa20.71■□□□□ 0.91
TPM1-226ENST00000560959 PLA2G4FQ68DD2 849 aa20.71■□□□□ 0.91
TPM1-226ENST00000560959 GPR161Q8N6U8 529 aaKnown RBP20.71■□□□□ 0.91
TPM1-226ENST00000560959 TCP11Q8WWU5 503 aa20.71■□□□□ 0.91
TPM1-226ENST00000560959 CEP170P1Q96L14 293 aa20.71■□□□□ 0.91
TPM1-226ENST00000560959 SLC26A6Q9BXS9 759 aa20.71■□□□□ 0.91
TPM1-226ENST00000560959 OSBPL6Q9BZF3 934 aa20.71■□□□□ 0.91
TPM1-226ENST00000560959 FBXO4Q9UKT5 387 aa20.71■□□□□ 0.91
TPM1-226ENST00000560959 IPPQ9Y573 584 aa20.71■□□□□ 0.91
TPM1-226ENST00000560959 NUMBLQ9Y6R0 609 aa20.71■□□□□ 0.91
TPM1-226ENST00000560959 M0R2N6 131 aa20.7■□□□□ 0.9
TPM1-226ENST00000560959 KINO60870 393 aaKnown RBP20.7■□□□□ 0.9
TPM1-226ENST00000560959 TDP2O95551 362 aa20.7■□□□□ 0.9
TPM1-226ENST00000560959 P4HBP07237 508 aaKnown RBP20.7■□□□□ 0.9
TPM1-226ENST00000560959 GLULP15104 373 aa20.7■□□□□ 0.9
TPM1-226ENST00000560959 NPEPPSP55786 919 aa20.7■□□□□ 0.9
TPM1-226ENST00000560959 EVCP57679 992 aa20.7■□□□□ 0.9
TPM1-226ENST00000560959 POU5F1BQ06416 359 aa20.7■□□□□ 0.9
TPM1-226ENST00000560959 NCBP1Q09161 790 aaKnown RBP20.7■□□□□ 0.9
TPM1-226ENST00000560959 USP41Q3LFD5 358 aa20.7■□□□□ 0.9
TPM1-226ENST00000560959 NOTUMQ6P988 496 aa20.7■□□□□ 0.9
TPM1-226ENST00000560959 POTEGQ6S5H5 508 aa20.7■□□□□ 0.9
TPM1-226ENST00000560959 PALB2Q86YC2 1186 aa20.7■□□□□ 0.9
TPM1-226ENST00000560959 MAML2Q8IZL2 1156 aaPredicted RBP20.7■□□□□ 0.9
TPM1-226ENST00000560959 GAD1Q99259 594 aa20.7■□□□□ 0.9
TPM1-226ENST00000560959 DDX23Q9BUQ8 820 aaKnown RBP20.7■□□□□ 0.9
TPM1-226ENST00000560959 GIT1Q9Y2X7 761 aa20.7■□□□□ 0.9
TPM1-226ENST00000560959 ZMYND10O75800 440 aa20.69■□□□□ 0.9
TPM1-226ENST00000560959 ERLIN2O94905 339 aa20.69■□□□□ 0.9
TPM1-226ENST00000560959 SPATA31D3P0C874 917 aa20.69■□□□□ 0.9
TPM1-226ENST00000560959 GALNT17Q6IS24 598 aa20.69■□□□□ 0.9
TPM1-226ENST00000560959 SPATA31D4Q6ZUB0 917 aa20.69■□□□□ 0.9
TPM1-226ENST00000560959 FERMT3Q86UX7 667 aa20.69■□□□□ 0.9
TPM1-226ENST00000560959 C4orf19Q8IY42 314 aa20.69■□□□□ 0.9
TPM1-226ENST00000560959 RNF149Q8NC42 400 aa20.69■□□□□ 0.9
TPM1-226ENST00000560959 TMEM143Q96AN5 459 aa20.69■□□□□ 0.9
TPM1-226ENST00000560959 FAM20AQ96MK3 541 aa20.69■□□□□ 0.9
TPM1-226ENST00000560959 CSRNP2Q9H175 543 aa20.69■□□□□ 0.9
TPM1-226ENST00000560959 RNF39Q9H2S5 420 aa20.69■□□□□ 0.9
TPM1-226ENST00000560959 MIOSQ9NXC5 875 aa20.69■□□□□ 0.9
TPM1-226ENST00000560959 DOCK8Q8NF50 2099 aa20.68■□□□□ 0.9
TPM1-226ENST00000560959 EML1O00423 815 aa20.68■□□□□ 0.9
TPM1-226ENST00000560959 SPTLC1O15269 473 aa20.68■□□□□ 0.9
TPM1-226ENST00000560959 MLH1P40692 756 aa20.68■□□□□ 0.9
TPM1-226ENST00000560959 MAGEA9P43362 315 aa20.68■□□□□ 0.9
TPM1-226ENST00000560959 PRKCQQ04759 706 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms