RNA–Protein interactions for RNA: ENST00000560788.1

PSME2-215, Transcript of proteasome activator subunit 2, human

TSL 2

Gene PSME2, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSME2-215	ENST00000560788	FREM2	Q5SZK8	3169 aa		13.64	□□□□□ -0.23
PSME2-215	ENST00000560788	ZMYND10	O75800	440 aa		13.64	□□□□□ -0.23
PSME2-215	ENST00000560788	PLEKHA8P1	O95397	391 aa		13.64	□□□□□ -0.23
PSME2-215	ENST00000560788	NCL	P19338	710 aa	Known RBP	13.64	□□□□□ -0.23
PSME2-215	ENST00000560788	SF3A2	Q15428	464 aa	Known RBP	13.64	□□□□□ -0.23
PSME2-215	ENST00000560788	AASDH	Q4L235	1098 aa	Predicted RBP	13.64	□□□□□ -0.23
PSME2-215	ENST00000560788	CATIP	Q7Z7H3	387 aa		13.64	□□□□□ -0.23
PSME2-215	ENST00000560788	SRBD1	Q8N5C6	995 aa	Known RBP	13.64	□□□□□ -0.23
PSME2-215	ENST00000560788	URGCP	Q8TCY9	931 aa		13.64	□□□□□ -0.23
PSME2-215	ENST00000560788	PGBD1	Q96JS3	809 aa		13.64	□□□□□ -0.23
PSME2-215	ENST00000560788	B3GALT6	Q96L58	329 aa		13.64	□□□□□ -0.23
PSME2-215	ENST00000560788	CHST7	Q9NS84	486 aa		13.64	□□□□□ -0.23
PSME2-215	ENST00000560788	WASF3	Q9UPY6	502 aa		13.64	□□□□□ -0.23
PSME2-215	ENST00000560788	MRPS17	Q9Y2R5	130 aa	Known RBP	13.64	□□□□□ -0.23
PSME2-215	ENST00000560788	BPTF	Q12830	3046 aa		13.63	□□□□□ -0.23
PSME2-215	ENST00000560788		F8W810	466 aa		13.63	□□□□□ -0.23
PSME2-215	ENST00000560788	POMC	P01189	267 aa		13.63	□□□□□ -0.23
PSME2-215	ENST00000560788	RAB27A	P51159	221 aa		13.63	□□□□□ -0.23
PSME2-215	ENST00000560788	DRP2	Q13474	957 aa		13.63	□□□□□ -0.23
PSME2-215	ENST00000560788	PPP2R5D	Q14738	602 aa		13.63	□□□□□ -0.23
PSME2-215	ENST00000560788	ANKRD45	Q5TZF3	282 aa		13.63	□□□□□ -0.23
PSME2-215	ENST00000560788	GLYCTK	Q8IVS8	523 aa		13.63	□□□□□ -0.23
PSME2-215	ENST00000560788	CMTR1	Q8N1G2	835 aa	Known RBP	13.63	□□□□□ -0.23
PSME2-215	ENST00000560788	FAM160A2	Q8N612	972 aa	Predicted RBP	13.63	□□□□□ -0.23
PSME2-215	ENST00000560788	ITFG1	Q8TB96	612 aa		13.63	□□□□□ -0.23
PSME2-215	ENST00000560788	FAM193B	Q96PV7	902 aa	Predicted RBP	13.63	□□□□□ -0.23
PSME2-215	ENST00000560788	MAP3K14	Q99558	947 aa		13.63	□□□□□ -0.23
PSME2-215	ENST00000560788	LSM14B	Q9BX40	385 aa	Known RBP	13.63	□□□□□ -0.23
PSME2-215	ENST00000560788	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.63	□□□□□ -0.23
PSME2-215	ENST00000560788	PLA2G2F	Q9BZM2	168 aa		13.63	□□□□□ -0.23
PSME2-215	ENST00000560788	PIN4	Q9Y237	131 aa	Known RBP	13.63	□□□□□ -0.23
PSME2-215	ENST00000560788	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.63	□□□□□ -0.23
PSME2-215	ENST00000560788	hCG_1642624	A0A1W2PR95	340 aa		13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	ERICH2	A1L162	156 aa		13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	CHURC1-FNTB	B4DL54	471 aa		13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	TAF4	O00268	1085 aa		13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	ZIC2	O95409	532 aa	Predicted RBP	13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	RPL17	P18621	184 aa	Known RBP	13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	FNTB	P49356	437 aa		13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	CCR3	P51677	355 aa		13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	SATB1	Q01826	763 aa		13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	STPG1	Q5TH74	334 aa		13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	COLGALT2	Q8IYK4	626 aa		13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	CTCFL	Q8NI51	663 aa	Predicted RBP	13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	PGBD4	Q96DM1	585 aa		13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	MBOAT7	Q96N66	472 aa		13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	RSAD1	Q9HA92	442 aa		13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	KANSL3	Q9P2N6	904 aa		13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	GABBR1	Q9UBS5	961 aa		13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	NDRG2	Q9UN36	371 aa	Known RBP	13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	PCDHB2	Q9Y5E7	798 aa		13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	NUP205	Q92621	2012 aa		13.62	□□□□□ -0.23
PSME2-215	ENST00000560788	NAV2	Q8IVL1	2488 aa		13.62	□□□□□ -0.23
PSME2-215	ENST00000560788		A0A087WZ62	844 aa		13.61	□□□□□ -0.23
PSME2-215	ENST00000560788	TMEM8B	A6NDV4	472 aa		13.61	□□□□□ -0.23
PSME2-215	ENST00000560788	FAM86B1	E9PN63	330 aa		13.61	□□□□□ -0.23
PSME2-215	ENST00000560788	FAM86B2	P0C5J1	330 aa		13.61	□□□□□ -0.23
PSME2-215	ENST00000560788	SPINK2	P20155	84 aa		13.61	□□□□□ -0.23
PSME2-215	ENST00000560788	SFPQ	P23246	707 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
PSME2-215	ENST00000560788	TRDN	Q13061	729 aa		13.61	□□□□□ -0.23
PSME2-215	ENST00000560788	CCDC6	Q16204	474 aa		13.61	□□□□□ -0.23
PSME2-215	ENST00000560788	PSAPL1	Q6NUJ1	521 aa		13.61	□□□□□ -0.23
PSME2-215	ENST00000560788	NIPA1	Q7RTP0	329 aa		13.61	□□□□□ -0.23
PSME2-215	ENST00000560788	MRPL10	Q7Z7H8	261 aa	Known RBP	13.61	□□□□□ -0.23
PSME2-215	ENST00000560788	NPAS3	Q8IXF0	933 aa		13.61	□□□□□ -0.23
PSME2-215	ENST00000560788	ZNF654	Q8IZM8	581 aa		13.61	□□□□□ -0.23
PSME2-215	ENST00000560788	IGDCC4	Q8TDY8	1250 aa		13.61	□□□□□ -0.23
PSME2-215	ENST00000560788	LZTS2	Q9BRK4	669 aa		13.61	□□□□□ -0.23
PSME2-215	ENST00000560788	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.61	□□□□□ -0.23
PSME2-215	ENST00000560788	IER2	Q9BTL4	223 aa		13.61	□□□□□ -0.23
PSME2-215	ENST00000560788	FNIP2	Q9P278	1114 aa		13.61	□□□□□ -0.23
PSME2-215	ENST00000560788	IGLV3-22	A0A075B6J6	115 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	IPO5	O00410	1097 aa	Known RBP	13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	ZNF862	O60290	1169 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	ECI2	O75521	394 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	PSAP	P07602	524 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	ZNF806	P0C7X5	589 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	CNR2	P34972	360 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	OR1G1	P47890	313 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	CXCL12	P48061	93 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	ANTXR2	P58335	489 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	PLA2G4D	Q86XP0	818 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	C12orf50	Q8NA57	414 aa	Predicted RBP	13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	GATA6	Q92908	595 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	FAM167A	Q96KS9	214 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	ANO3	Q9BYT9	981 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	ADAM33	Q9BZ11	813 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	IL25	Q9H293	177 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	LMAN1L	Q9HAT1	526 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	DIAPH3	Q9NSV4	1193 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	RCAN3	Q9UKA8	241 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	FBXW11	Q9UKB1	542 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	PCDHA10	Q9Y5I2	948 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	TAF6L	Q9Y6J9	622 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	ATG2B	Q96BY7	2078 aa		13.6	□□□□□ -0.23
PSME2-215	ENST00000560788	MAN2B1	O00754	1011 aa		13.59	□□□□□ -0.23
PSME2-215	ENST00000560788	DDAH1	O94760	285 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms