RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 FRMD5Q7Z6J6 570 aa13.42□□□□□ -0.26
SYNM-203ENST00000560674 CEP95Q96GE4 821 aa13.42□□□□□ -0.26
SYNM-203ENST00000560674 RNPC3Q96LT9 517 aaKnown RBP13.42□□□□□ -0.26
SYNM-203ENST00000560674 CCDC90BQ9GZT6 254 aa13.42□□□□□ -0.26
SYNM-203ENST00000560674 POLD4Q9HCU8 107 aa13.42□□□□□ -0.26
SYNM-203ENST00000560674 IRAK4Q9NWZ3 460 aa13.42□□□□□ -0.26
SYNM-203ENST00000560674 BFARQ9NZS9 450 aa13.42□□□□□ -0.26
SYNM-203ENST00000560674 SNX12Q9UMY4 172 aa13.42□□□□□ -0.26
SYNM-203ENST00000560674 ROBO2Q9HCK4 1378 aa13.42□□□□□ -0.26
SYNM-203ENST00000560674 CRKP46108 304 aa13.42□□□□□ -0.26
SYNM-203ENST00000560674 KCNQ4P56696 695 aa13.42□□□□□ -0.26
SYNM-203ENST00000560674 FLOT2Q14254 428 aa13.42□□□□□ -0.26
SYNM-203ENST00000560674 MTF1Q14872 753 aa13.42□□□□□ -0.26
SYNM-203ENST00000560674 HLFQ16534 295 aa13.42□□□□□ -0.26
SYNM-203ENST00000560674 RARS2Q5T160 578 aaKnown RBP13.42□□□□□ -0.26
SYNM-203ENST00000560674 BEST2Q8NFU1 509 aa13.42□□□□□ -0.26
SYNM-203ENST00000560674 LRRC1Q9BTT6 524 aa13.42□□□□□ -0.26
SYNM-203ENST00000560674 LIMA1Q9UHB6 759 aaKnown RBP13.42□□□□□ -0.26
SYNM-203ENST00000560674 FGFR4P22455 802 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 KRT33BQ14525 404 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 SPATA21Q7Z572 469 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 WWP1Q9H0M0 922 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 SENP1Q9P0U3 644 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 STX18Q9P2W9 335 aaKnown RBP13.41□□□□□ -0.26
SYNM-203ENST00000560674 ESRRBO95718 433 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 SYF2O95926 243 aaKnown RBP13.41□□□□□ -0.26
SYNM-203ENST00000560674 FCER1AP12319 257 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 HDAC4P56524 1084 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 KIF17Q9P2E2 1029 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 PPP1R37O75864 691 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 TAP1Q03518 808 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.41□□□□□ -0.266e-9■■■□□ 18.9
SYNM-203ENST00000560674 MTBPQ96DY7 904 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 STAT3P40763 770 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 MDH1P40925 334 aaKnown RBP13.41□□□□□ -0.26
SYNM-203ENST00000560674 AP1B1Q10567 949 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 MAPRE2Q15555 327 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 CAPRIN2Q6IMN6 1127 aaKnown RBP13.41□□□□□ -0.26
SYNM-203ENST00000560674 C2orf40Q9H1Z8 148 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 VIPAS39Q9H9C1 493 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 RAVER2Q9HCJ3 691 aaKnown RBP13.41□□□□□ -0.26
SYNM-203ENST00000560674 ZNF302Q9NR11 478 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 PARVAQ9NVD7 372 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 ZCCHC11Q5TAX3 1644 aaKnown RBP13.41□□□□□ -0.26
SYNM-203ENST00000560674 F5H423 210 aaPredicted RBP13.41□□□□□ -0.26
SYNM-203ENST00000560674 AGTP01019 485 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 TYK2P29597 1187 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 ARSEP51690 589 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 KCNA1Q09470 495 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 SGMS1Q86VZ5 419 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 DACH2Q96NX9 599 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 AGPAT1Q99943 283 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 TEX12Q9BXU0 123 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 EPN3Q9H201 632 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 EMSYQ7Z589 1322 aa13.41□□□□□ -0.26
SYNM-203ENST00000560674 PPP1R12AO14974 1030 aaPredicted RBP13.4□□□□□ -0.26
SYNM-203ENST00000560674 TMCC1O94876 653 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 TRIM49P0CI25 452 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 TRIM49CP0CI26 452 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 CACNB3P54284 484 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 NFX1Q12986 1120 aaKnown RBP13.4□□□□□ -0.26
SYNM-203ENST00000560674 ARHGEF6Q15052 776 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 ANKRD40Q6AI12 368 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 CIAPIN1Q6FI81 312 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 METTL16Q86W50 562 aaKnown RBP13.4□□□□□ -0.26
SYNM-203ENST00000560674 TTC39CQ8N584 583 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 NAF1Q96HR8 494 aaKnown RBP13.4□□□□□ -0.26
SYNM-203ENST00000560674 ASPSCR1Q9BZE9 553 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 FBXO40Q9UH90 709 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 ARL2BPQ9Y2Y0 163 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 PRR36Q9H6K5 1346 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 RASSF10A6NK89 507 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 PIK3R2O00459 728 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 ATXN8OSP0DMR3 200 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 ATICP31939 592 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 BYSLQ13895 437 aaKnown RBP13.4□□□□□ -0.26
SYNM-203ENST00000560674 EFHC2Q5JST6 749 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 SLC44A5Q8NCS7 719 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 RAPGEF5Q92565 580 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 PRMT1Q99873 361 aaKnown RBP13.4□□□□□ -0.26
SYNM-203ENST00000560674 HPCAL4Q9UM19 191 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 FOXP2O15409 715 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 MEFVO15553 781 aaPredicted RBP13.4□□□□□ -0.26
SYNM-203ENST00000560674 KCNJ6P48051 423 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 CUL3Q13618 768 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 SZRD1Q7Z422 152 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 GPD1LQ8N335 351 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 NSUN6Q8TEA1 469 aaKnown RBP13.4□□□□□ -0.26
SYNM-203ENST00000560674 DPF2Q92785 391 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 ACAP3Q96P50 834 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 LXNQ9BS40 222 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 MINPP1Q9UNW1 487 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 UGGT1Q9NYU2 1555 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 TCP11X1B4DZS4 312 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 TDP2O95551 362 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 ZFXP17010 805 aaPredicted RBP13.4□□□□□ -0.26
SYNM-203ENST00000560674 HIF1AQ16665 826 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 SLC10A5Q5PT55 438 aa13.4□□□□□ -0.26
SYNM-203ENST00000560674 SYDE1Q6ZW31 735 aaPredicted RBP13.4□□□□□ -0.26
SYNM-203ENST00000560674 STAMBPL1Q96FJ0 436 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms