RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 GMCL1Q96IK5 515 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 PRIMPOLQ96LW4 560 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 TRIM4Q9C037 500 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 C1orf112Q9NSG2 853 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 TMEM161AQ9NX61 479 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 CDH7Q9ULB5 785 aa7.51□□□□□ -1.21
HERC1-208ENST00000560462 MYO5AQ9Y4I1 1855 aaKnown RBP7.5□□□□□ -1.21
HERC1-208ENST00000560462 C9IYK1 514 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 NT5C1B-RDH14C9J2C7 533 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 M0QZ92 97 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 MGEA5O60502 916 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 GGPS1O95749 300 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 CNPP09543 421 aaKnown RBP7.5□□□□□ -1.21
HERC1-208ENST00000560462 UBTFL1P0CB47 393 aaPredicted RBP7.5□□□□□ -1.21
HERC1-208ENST00000560462 CHRNB1P11230 501 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 FSHRP23945 695 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 MAPK1P28482 360 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 HOXC13P31276 330 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 SEMA3BQ13214 749 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 ECM1Q16610 540 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 LRRC69Q6ZNQ3 347 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 DDX53Q86TM3 631 aaKnown RBP7.5□□□□□ -1.21
HERC1-208ENST00000560462 BPHLQ86WA6 291 aaPredicted RBP7.5□□□□□ -1.21
HERC1-208ENST00000560462 FAM3CQ92520 227 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 CHMP4CQ96CF2 233 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 CASD1Q96PB1 797 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 ADAM2Q99965 735 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 SEMA4CQ9C0C4 833 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 DUSP15Q9H1R2 295 aaPredicted RBP7.5□□□□□ -1.21
HERC1-208ENST00000560462 RGS18Q9NS28 235 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 ZNF215Q9UL58 517 aaPredicted RBP7.5□□□□□ -1.21
HERC1-208ENST00000560462 USP9YO00507 2555 aaPredicted RBP7.5□□□□□ -1.21
HERC1-208ENST00000560462 TSC2P49815 1807 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 FANCIQ9NVI1 1328 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 IGSF9BQ9UPX0 1349 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 ITPR2Q14571 2701 aa7.5□□□□□ -1.21
HERC1-208ENST00000560462 GREB1LQ9C091 1923 aaPredicted RBP7.49□□□□□ -1.21
HERC1-208ENST00000560462 CCDC163A0A0D9SF12 145 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 CCDC194A0A1B0GVG4 234 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 GOLGA8CPA6NN73 597 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 SFI1A8K8P3 1242 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 MEFVO15553 781 aaPredicted RBP7.49□□□□□ -1.21
HERC1-208ENST00000560462 EIF3JO75822 258 aaKnown RBP7.49□□□□□ -1.21
HERC1-208ENST00000560462 RHOBTB1O94844 696 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 TTLL1O95922 423 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 MYBP10242 640 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 MCCP23508 829 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 ADSSP30520 456 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 MAPK8P45983 427 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 PXNP49023 591 aaPredicted RBP7.49□□□□□ -1.21
HERC1-208ENST00000560462 BCAR1P56945 870 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 IRX4P78413 519 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 LMAN2Q12907 356 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 NFX1Q12986 1120 aaKnown RBP7.49□□□□□ -1.21
HERC1-208ENST00000560462 ZNF211Q13398 564 aaPredicted RBP7.49□□□□□ -1.21
HERC1-208ENST00000560462 HNRNPDQ14103 355 aaKnown RBP7.49□□□□□ -1.21
HERC1-208ENST00000560462 UBAP2LQ14157 1087 aaKnown RBP7.49□□□□□ -1.21
HERC1-208ENST00000560462 LRRC32Q14392 662 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 TMEM266Q2M3C6 531 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 FAM43BQ6ZT52 329 aaPredicted RBP7.49□□□□□ -1.21
HERC1-208ENST00000560462 KCTD1Q719H9 257 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 LCORLQ8N3X6 602 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 PNPLA1Q8N8W4 532 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 NSUN6Q8TEA1 469 aaKnown RBP7.49□□□□□ -1.21
HERC1-208ENST00000560462 DNASE1L2Q92874 299 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 ZNF512BQ96KM6 892 aaPredicted RBP7.49□□□□□ -1.21
HERC1-208ENST00000560462 ATP8A2Q9NTI2 1148 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 TUBE1Q9UJT0 475 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 SPAG17Q6Q759 2223 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 PCNX2A6NKB5 2137 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 CCDC171Q6TFL3 1326 aa7.49□□□□□ -1.21
HERC1-208ENST00000560462 ZFHX3Q15911 3703 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 IGKV6D-41A0A0C4DH26 115 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 TRABD2BA6NFA1 517 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 ESPNB1AK53 854 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 PATE3B3GLJ2 98 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 RPLP2P05387 115 aaKnown RBP7.48□□□□□ -1.21
HERC1-208ENST00000560462 FTH1P19P0C7X4 201 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 CR2P20023 1033 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 ELAVL4P26378 380 aaKnown RBP7.48□□□□□ -1.21
HERC1-208ENST00000560462 EXOSC9Q06265 439 aaKnown RBP7.48□□□□□ -1.21
HERC1-208ENST00000560462 PDXDC1Q6P996 788 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 RGL4Q8IZJ4 473 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 FGF13Q92913 245 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 CEP95Q96GE4 821 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 IWS1Q96ST2 819 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 DBNDD2Q9BQY9 259 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 NT5C3AQ9H0P0 336 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 RANBP17Q9H2T7 1088 aaKnown RBP7.48□□□□□ -1.21
HERC1-208ENST00000560462 ELAC1Q9H777 363 aaKnown RBP7.48□□□□□ -1.21
HERC1-208ENST00000560462 MLXIPQ9HAP2 919 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 MKNK2Q9HBH9 465 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 C2orf42Q9NWW7 574 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 MTMR4Q9NYA4 1195 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 HSPBP1Q9NZL4 362 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 TRPV2Q9Y5S1 764 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 KIAA1217Q5T5P2 1943 aa7.48□□□□□ -1.21
HERC1-208ENST00000560462 ASCC3Q8N3C0 2202 aaKnown RBP7.47□□□□□ -1.21
HERC1-208ENST00000560462 NOP56O00567 594 aaKnown RBP7.47□□□□□ -1.21
HERC1-208ENST00000560462 RRP8O43159 456 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms