RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 KIAA1328Q86T90 577 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 C12orf56Q8IXR9 622 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 LRRN4CLQ8ND94 238 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 SLC17A8Q8NDX2 589 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 PSPC1Q8WXF1 523 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 INTS2Q9H0H0 1204 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 MINDY3Q9H8M7 445 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 ZFYVE28Q9HCC9 887 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 ADAMTS1Q9UHI8 967 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 RBM47A0AV96 593 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 INO80B-WBP1J3KQ70 363 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 B4GALT5O43286 388 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 ADCY3O60266 1144 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 HBP1O60381 514 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 TBC1D8O95759 1140 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 MMP3P08254 477 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 IQCF3P0C7M6 154 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 TNFSF9P41273 254 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 OSTNP61366 133 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 CAP1Q01518 475 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 KLHL30Q0D2K2 578 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 TMEM62Q0P6H9 643 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 CCDC122Q5T0U0 273 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 ARHGEF19Q8IW93 802 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 GPD1LQ8N335 351 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 LMO3Q8TAP4 145 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 PARD3BQ8TEW8 1205 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 SEMA4DQ92854 862 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 TCHPQ9BT92 498 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 PI4K2AQ9BTU6 479 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 INO80BQ9C086 356 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 PDE11AQ9HCR9 933 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 PLCB1Q9NQ66 1216 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 DNAJC12Q9UKB3 198 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 GINS2Q9Y248 185 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 PTK2Q05397 1052 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 SLC9C1Q4G0N8 1177 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 IER5Q5VY09 327 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 IRF2BP2Q7Z5L9 587 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 SLC35F6Q8N357 371 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 FAM212AQ96EL1 285 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 SETD4Q9NVD3 440 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 AGO2Q9UKV8 859 aaKnown RBP11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 AKT3Q9Y243 479 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 A0A087X0T9 212 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 LOC102724159A0A0B4J2E5 919 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 IGKV6-21A0A0C4DH24 114 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 TMEM88BA6NKF7 163 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 EIF3CLB5ME19 914 aaKnown RBP11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 ENC1O14682 589 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 C22orf31O95567 290 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 FAM228BP0C875 321 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 CASQ1P31415 396 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 MXI1P50539 228 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 CYP24A1Q07973 514 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 MYBPC2Q14324 1141 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 DRAP1Q14919 205 aaPredicted RBP11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 PWP2Q15269 919 aaKnown RBP11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 ASIC2Q16515 512 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 CRELD2Q6UXH1 353 aaPredicted RBP11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 ZNF571Q7Z3V5 609 aaPredicted RBP11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 TMEM130Q8N3G9 435 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 MYRIPQ8NFW9 859 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 TAS1R2Q8TE23 839 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 JAKMIP2Q96AA8 810 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 HVCN1Q96D96 273 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 PRIMPOLQ96LW4 560 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 EIF3CQ99613 913 aaKnown RBP11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 MSTO1Q9BUK6 570 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 IFIH1Q9BYX4 1025 aaKnown RBP11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 UBE2TQ9NPD8 197 aaPredicted RBP11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 ACP6Q9NPH0 428 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 GJD2Q9UKL4 321 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 GABRQQ9UN88 632 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 PCDHA13Q9Y5I0 950 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 PTPRJQ12913 1337 aa11.81□□□□□ -0.52
SNRPA1-211ENST00000560433 A0A087WZ62 844 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 MSCO60682 206 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 PPFIA4O75335 1185 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 IPO7O95373 1038 aaKnown RBP11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 SERPING1P05155 500 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 ZNF865P0CJ78 1059 aaPredicted RBP11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 SPA17Q15506 151 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 ASTE1Q2TB18 679 aaPredicted RBP11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 CCDC170Q8IYT3 715 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 CEP120Q8N960 986 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 EHBP1Q8NDI1 1231 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 ZNF516Q92618 1163 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 IQCDQ96DY2 449 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 FDXACB1Q9BRP7 624 aaPredicted RBP11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 PACSIN1Q9BY11 444 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 GPR88Q9GZN0 384 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 SLC5A4Q9NY91 659 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 CGNQ9P2M7 1197 aaKnown RBP11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 APEX2Q9UBZ4 518 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 GTPBP10A4D1E9 387 aaKnown RBP11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 GOLGA6L9A6NEM1 432 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 ZNF233A6NK53 670 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 KIF5CO60282 957 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 CLSTN1O94985 981 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms