RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 MIS18BP1Q6P0N0 1132 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 MPRIPQ6WCQ1 1025 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 BNC2Q6ZN30 1099 aaPredicted RBP6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 AGMOQ6ZNB7 445 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 BZW1Q7L1Q6 419 aaKnown RBP6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 HOOK3Q86VS8 718 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 NBPF5PQ86XG9 351 aaPredicted RBP6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 ANKLE2Q86XL3 938 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 USHBP1Q8N6Y0 703 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 FBXO27Q8NI29 283 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 MICAL1Q8TDZ2 1067 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 HDAC7Q8WUI4 952 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 CASKIN2Q8WXE0 1202 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 RAPGEF5Q92565 580 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 TNFRSF25Q93038 417 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 MKL1Q969V6 931 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 TLCD1Q96CP7 247 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 CHMP6Q96FZ7 201 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 PBKQ96KB5 322 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 INPP4AQ96PE3 977 aaPredicted RBP6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 DEPDC7Q96QD5 511 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 TUBGCP2Q9BSJ2 902 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 FAM129AQ9BZQ8 928 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 MIR1-1HGQ9H1L0 117 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 RNF41Q9H4P4 317 aaPredicted RBP6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 SLC52A2Q9HAB3 445 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 EPB41L5Q9HCM4 733 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 RBM12Q9NTZ6 932 aaKnown RBP6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 PCMTD2Q9NV79 361 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 SNTG2Q9NY99 539 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 PRKAG3Q9UGI9 489 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 NFU1Q9UMS0 254 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 NFS1Q9Y697 457 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 BCL9O00512 1426 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 MYH3P11055 1940 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 PNPLA7Q6ZV29 1317 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 ADAMTSL3P82987 1691 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 LOC102724428A0A0B4J2F2 783 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 MACROD2A1Z1Q3 448 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 B4E1Z4 1266 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 ZNF263O14978 683 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 KLF4O43474 513 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 BNIP3LO60238 219 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 MOCS3O95396 460 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 GHRHP01286 108 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 UQCRFS1P1P0C7P4 283 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 PCP11498 1178 aaKnown RBP6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 IBSPP21815 317 aaPredicted RBP6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 ITPKAP23677 461 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 HSD3B2P26439 372 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 ANXA13P27216 316 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 HSD17B3P37058 310 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 SKIV2L2P42285 1042 aaKnown RBP6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 GCLCP48506 637 aaPredicted RBP6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 EIF6P56537 245 aaKnown RBP6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 SIK1P57059 783 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 TIMM10P62072 90 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 ATP11AP98196 1134 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 SLC7A5Q01650 507 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 ROR2Q01974 943 aaKnown RBP6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 GUCY2DQ02846 1103 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 ZNF844Q08AG5 666 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 FAAP100Q0VG06 881 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 CLUL1Q15846 466 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 PPP2R5EQ16537 467 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 SLC5A9Q2M3M2 681 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 SGSM1Q2NKQ1 1148 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 AKNAD1Q5T1N1 836 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 C10orf76Q5T2E6 689 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 ERMARDQ5T6L9 678 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 KCTD16Q68DU8 428 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 NFRKBQ6P4R8 1299 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 FAM196AQ6ZSG2 479 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 USP49Q70CQ1 688 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 MAATS1Q7Z4T9 603 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 PIGWQ7Z7B1 504 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 SDCCAG8Q86SQ7 713 aaPredicted RBP6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 CCDC84Q86UT8 332 aaPredicted RBP6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 USP38Q8NB14 1042 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 GIMAP8Q8ND71 665 aaPredicted RBP6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 SH3TC2Q8TF17 1288 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 NSMCE1Q8WV22 266 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 SEC14L1Q92503 715 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 NXPE3Q969Y0 559 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 SPDL1Q96EA4 605 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 DTNBP1Q96EV8 351 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 LTV1Q96GA3 475 aaPredicted RBP6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 EPSTI1Q96J88 318 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 IFT74Q96LB3 600 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 XPO6Q96QU8 1125 aaKnown RBP6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 PLA2G12BQ9BX93 195 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 TLR10Q9BXR5 811 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 PUS7LQ9H0K6 701 aaKnown RBP6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 RABEP2Q9H5N1 569 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 SLITRK6Q9H5Y7 841 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 ZNF576Q9H609 170 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 CABP5Q9NP86 173 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 SLC39A2Q9NP94 309 aa6.47□□□□□ -1.37
SNRPA1-209ENST00000560307 KCNMB3Q9NPA1 279 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms