RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 HS3ST4Q9Y661 456 aa5.06□□□□□ -1.6
LRRC28-218ENST00000560236 A0A0A6YYK5 440 aaPredicted RBP5.05□□□□□ -1.6
LRRC28-218ENST00000560236 NRP1O14786 923 aa5.05□□□□□ -1.6
LRRC28-218ENST00000560236 DNAJC8O75937 253 aaPredicted RBP5.05□□□□□ -1.6
LRRC28-218ENST00000560236 GAAP10253 952 aa5.05□□□□□ -1.6
LRRC28-218ENST00000560236 LAG3P18627 525 aa5.05□□□□□ -1.6
LRRC28-218ENST00000560236 FLT3P36888 993 aa5.05□□□□□ -1.6
LRRC28-218ENST00000560236 CCDC142Q17RM4 750 aa5.05□□□□□ -1.6
LRRC28-218ENST00000560236 UBE2R2Q712K3 238 aaPredicted RBP5.05□□□□□ -1.6
LRRC28-218ENST00000560236 CXorf67Q86X51 503 aaPredicted RBP5.05□□□□□ -1.6
LRRC28-218ENST00000560236 RTF1Q92541 710 aaKnown RBP5.05□□□□□ -1.6
LRRC28-218ENST00000560236 HIST1H2AHQ96KK5 128 aa5.05□□□□□ -1.6
LRRC28-218ENST00000560236 C8orf37Q96NL8 207 aa5.05□□□□□ -1.6
LRRC28-218ENST00000560236 HIST1H2AJQ99878 128 aa5.05□□□□□ -1.6
LRRC28-218ENST00000560236 SOX7Q9BT81 388 aa5.05□□□□□ -1.6
LRRC28-218ENST00000560236 TOMM22Q9NS69 142 aa5.05□□□□□ -1.6
LRRC28-218ENST00000560236 EIF2B4Q9UI10 523 aaKnown RBP5.05□□□□□ -1.6
LRRC28-218ENST00000560236 SPO11Q9Y5K1 396 aa5.05□□□□□ -1.6
LRRC28-218ENST00000560236 GRID2IPA4D2P6 1211 aa5.04□□□□□ -1.6
LRRC28-218ENST00000560236 CBX4O00257 560 aa5.04□□□□□ -1.6
LRRC28-218ENST00000560236 ALDH1A2O94788 518 aa5.04□□□□□ -1.6
LRRC28-218ENST00000560236 JMJD7P0C870 316 aa5.04□□□□□ -1.6
LRRC28-218ENST00000560236 FBLP22087 321 aaKnown RBP5.04□□□□□ -1.6
LRRC28-218ENST00000560236 LMO1P25800 156 aa5.04□□□□□ -1.6
LRRC28-218ENST00000560236 HECTD2Q5U5R9 776 aa5.04□□□□□ -1.6
LRRC28-218ENST00000560236 ZZZ3Q8IYH5 903 aa5.04□□□□□ -1.6
LRRC28-218ENST00000560236 GLB1L3Q8NCI6 653 aaPredicted RBP5.04□□□□□ -1.6
LRRC28-218ENST00000560236 OR5M3Q8NGP4 307 aa5.04□□□□□ -1.6
LRRC28-218ENST00000560236 PMFBP1Q8TBY8 1022 aa5.04□□□□□ -1.6
LRRC28-218ENST00000560236 PDCD2LQ9BRP1 358 aa5.04□□□□□ -1.6
LRRC28-218ENST00000560236 KCNH6Q9H252 994 aa5.04□□□□□ -1.6
LRRC28-218ENST00000560236 TOR3AQ9H497 397 aa5.04□□□□□ -1.6
LRRC28-218ENST00000560236 CYP4F11Q9HBI6 524 aa5.04□□□□□ -1.6
LRRC28-218ENST00000560236 PTGFRNQ9P2B2 879 aa5.04□□□□□ -1.6
LRRC28-218ENST00000560236 FANCAO15360 1455 aa5.04□□□□□ -1.6
LRRC28-218ENST00000560236 IQGAP2Q13576 1575 aa5.04□□□□□ -1.6
LRRC28-218ENST00000560236 NEO1Q92859 1461 aa5.03□□□□□ -1.6
LRRC28-218ENST00000560236 ZAR1LA6NP61 321 aa5.03□□□□□ -1.6
LRRC28-218ENST00000560236 DNAJC6O75061 913 aa5.03□□□□□ -1.6
LRRC28-218ENST00000560236 PCDH8O95206 1070 aa5.03□□□□□ -1.6
LRRC28-218ENST00000560236 CASRP41180 1078 aa5.03□□□□□ -1.6
LRRC28-218ENST00000560236 MRPS21P82921 87 aaKnown RBP5.03□□□□□ -1.6
LRRC28-218ENST00000560236 METTL24Q5JXM2 366 aa5.03□□□□□ -1.6
LRRC28-218ENST00000560236 CDCA2Q69YH5 1023 aaPredicted RBP5.03□□□□□ -1.6
LRRC28-218ENST00000560236 FAM83AQ86UY5 434 aa5.03□□□□□ -1.6
LRRC28-218ENST00000560236 UNC5BQ8IZJ1 945 aa5.03□□□□□ -1.6
LRRC28-218ENST00000560236 SLC46A2Q9BY10 475 aa5.03□□□□□ -1.6
LRRC28-218ENST00000560236 CPEB1Q9BZB8 566 aaKnown RBP5.03□□□□□ -1.6
LRRC28-218ENST00000560236 ENKD1Q9H0I2 346 aa5.03□□□□□ -1.6
LRRC28-218ENST00000560236 ZNF768Q9H5H4 540 aaKnown RBP5.03□□□□□ -1.6
LRRC28-218ENST00000560236 OXSMQ9NWU1 459 aa5.03□□□□□ -1.6
LRRC28-218ENST00000560236 HDAC5Q9UQL6 1122 aa5.03□□□□□ -1.6
LRRC28-218ENST00000560236 ABCA9Q8IUA7 1624 aa5.03□□□□□ -1.6
LRRC28-218ENST00000560236 RICTORQ6R327 1708 aa5.03□□□□□ -1.6
LRRC28-218ENST00000560236 ARHGEF40Q8TER5 1519 aa5.02□□□□□ -1.61
LRRC28-218ENST00000560236 TTBK1Q5TCY1 1321 aaPredicted RBP5.02□□□□□ -1.61
LRRC28-218ENST00000560236 CENPVL1A0A0U1RR11 272 aa5.02□□□□□ -1.61
LRRC28-218ENST00000560236 AHRRA9YTQ3 701 aa5.02□□□□□ -1.61
LRRC28-218ENST00000560236 CFBP00751 764 aa5.02□□□□□ -1.61
LRRC28-218ENST00000560236 ZFP36P26651 326 aaKnown RBP5.02□□□□□ -1.61
LRRC28-218ENST00000560236 TAP1Q03518 808 aa5.02□□□□□ -1.61
LRRC28-218ENST00000560236 VPS72Q15906 364 aa5.02□□□□□ -1.61
LRRC28-218ENST00000560236 CFAP100Q494V2 611 aa5.02□□□□□ -1.61
LRRC28-218ENST00000560236 CREB3L3Q68CJ9 461 aa5.02□□□□□ -1.61
LRRC28-218ENST00000560236 IQSEC1Q6DN90 963 aa5.02□□□□□ -1.61
LRRC28-218ENST00000560236 PRIMA1Q86XR5 153 aa5.02□□□□□ -1.61
LRRC28-218ENST00000560236 BEND2Q8NDZ0 799 aa5.02□□□□□ -1.61
LRRC28-218ENST00000560236 PIK3C3Q8NEB9 887 aa5.02□□□□□ -1.61
LRRC28-218ENST00000560236 OR52N2Q8NGI0 321 aa5.02□□□□□ -1.61
LRRC28-218ENST00000560236 MYEOVQ96EZ4 313 aa5.02□□□□□ -1.61
LRRC28-218ENST00000560236 ZNF764Q96H86 408 aaPredicted RBP5.02□□□□□ -1.61
LRRC28-218ENST00000560236 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.02□□□□□ -1.61
LRRC28-218ENST00000560236 ZKSCAN5Q9Y2L8 839 aa5.02□□□□□ -1.61
LRRC28-218ENST00000560236 MYPNQ86TC9 1320 aa5.01□□□□□ -1.61
LRRC28-218ENST00000560236 FRMPD1Q5SYB0 1578 aa5.01□□□□□ -1.61
LRRC28-218ENST00000560236 APOBEC3AP31941 199 aaPredicted RBP5.01□□□□□ -1.61
LRRC28-218ENST00000560236 IL12RB1P42701 662 aa5.01□□□□□ -1.61
LRRC28-218ENST00000560236 PTTG1IPP53801 180 aa5.01□□□□□ -1.61
LRRC28-218ENST00000560236 WNT3AP56704 352 aa5.01□□□□□ -1.61
LRRC28-218ENST00000560236 CD69Q07108 199 aa5.01□□□□□ -1.61
LRRC28-218ENST00000560236 STRIP1Q5VSL9 837 aa5.01□□□□□ -1.61
LRRC28-218ENST00000560236 OLFML1Q6UWY5 402 aa5.01□□□□□ -1.61
LRRC28-218ENST00000560236 ADGRG3Q86Y34 549 aa5.01□□□□□ -1.61
LRRC28-218ENST00000560236 PPP1R14CQ8TAE6 165 aa5.01□□□□□ -1.61
LRRC28-218ENST00000560236 IL17RAQ96F46 866 aa5.01□□□□□ -1.61
LRRC28-218ENST00000560236 NDC1Q9BTX1 674 aa5.01□□□□□ -1.61
LRRC28-218ENST00000560236 ZMAT4Q9H898 229 aa5.01□□□□□ -1.61
LRRC28-218ENST00000560236 TRPM5Q9NZQ8 1165 aa5.01□□□□□ -1.61
LRRC28-218ENST00000560236 PCDHB6Q9Y5E3 794 aa5.01□□□□□ -1.61
LRRC28-218ENST00000560236 UHRF1BP1Q6BDS2 1440 aa5□□□□□ -1.61
LRRC28-218ENST00000560236 COL4A3Q01955 1670 aa5□□□□□ -1.61
LRRC28-218ENST00000560236 ST20-MTHFSA0A0A6YYL1 179 aa5□□□□□ -1.61
LRRC28-218ENST00000560236 MASP2O00187 686 aa5□□□□□ -1.61
LRRC28-218ENST00000560236 KIAA0355O15063 1070 aa5□□□□□ -1.61
LRRC28-218ENST00000560236 LPXNO60711 386 aa5□□□□□ -1.61
LRRC28-218ENST00000560236 LY86O95711 162 aa5□□□□□ -1.61
LRRC28-218ENST00000560236 ATP2A2P16615 1042 aaKnown RBP5□□□□□ -1.61
LRRC28-218ENST00000560236 SDSP20132 328 aa5□□□□□ -1.61
LRRC28-218ENST00000560236 CD40P25942 277 aa5□□□□□ -1.61
LRRC28-218ENST00000560236 USP14P54578 494 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms