RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 ATF7IP2Q5U623 682 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 SLC27A1Q6PCB7 646 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 GLB1LQ6UWU2 654 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 TAS1R3Q7RTX0 852 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 HAUS6Q7Z4H7 955 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 MRPL10Q7Z7H8 261 aaKnown RBP9.41□□□□□ -0.9
USP3-217ENST00000560070 SFR1Q86XK3 245 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 IQUBQ8NA54 791 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 KLHL23Q8NBE8 558 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 TMEM161BQ8NDZ6 487 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 SPIRE2Q8WWL2 714 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 BICD1Q96G01 975 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 GAD1Q99259 594 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 ACO2Q99798 780 aaKnown RBP9.41□□□□□ -0.9
USP3-217ENST00000560070 NTPCRQ9BSD7 190 aaKnown RBP9.41□□□□□ -0.9
USP3-217ENST00000560070 NFKBIZQ9BYH8 718 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 CCDC113Q9H0I3 377 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 BLZF1Q9H2G9 400 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 NXF3Q9H4D5 531 aaKnown RBP9.41□□□□□ -0.9
USP3-217ENST00000560070 PDZD7Q9H5P4 517 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 TMEM134Q9H6X4 195 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 CWH43Q9H720 699 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 RSAD1Q9HA92 442 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 PARVGQ9HBI0 331 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 PANK4Q9NVE7 773 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 MIOSQ9NXC5 875 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 SNTG2Q9NY99 539 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 KCND2Q9NZV8 630 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 KCNH3Q9ULD8 1083 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 ODF2LQ9ULJ1 636 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 GDAQ9Y2T3 454 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 MORC2Q9Y6X9 1032 aaPredicted RBP9.41□□□□□ -0.9
USP3-217ENST00000560070 LTBP2Q14767 1821 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 GOLGA6L4A6NEF3 574 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 K7ENM7 598 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 HOXA2O43364 376 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 GTPBP6O43824 516 aaPredicted RBP9.4□□□□□ -0.9
USP3-217ENST00000560070 ZNF623O75123 536 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 MAPTP10636 758 aaKnown RBP9.4□□□□□ -0.9
USP3-217ENST00000560070 PFKFB1P16118 471 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 CMA1P23946 247 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 RAB27AP51159 221 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 NDUFA8P51970 172 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 PCBP1Q15365 356 aaKnown RBP eCLIP9.4□□□□□ -0.9
USP3-217ENST00000560070 SKIV2LQ15477 1246 aaKnown RBP9.4□□□□□ -0.9
USP3-217ENST00000560070 E2F4Q16254 413 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 FAM187BQ17R55 369 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 ADALQ6DHV7 355 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 ZNF280BQ86YH2 543 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 FAM178BQ8IXR5 827 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 THNSL1Q8IYQ7 743 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 CEP57L1Q8IYX8 460 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 FSIP1Q8NA03 581 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 COLGALT1Q8NBJ5 622 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 MICAL1Q8TDZ2 1067 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 RABGGTAQ92696 567 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 HPS3Q969F9 1004 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 DNAJC19Q96DA6 116 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 PRIMPOLQ96LW4 560 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 ZFP42Q96MM3 310 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 ADPGKQ9BRR6 497 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 TRAIPQ9BWF2 469 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 MRPL4Q9BYD3 311 aaKnown RBP9.4□□□□□ -0.9
USP3-217ENST00000560070 SCAND2PQ9GZW5 306 aaPredicted RBP9.4□□□□□ -0.9
USP3-217ENST00000560070 CXCL16Q9H2A7 254 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 IKZF4Q9H2S9 585 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 GOLPH3LQ9H4A5 285 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 C17orf75Q9HAS0 396 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 RC3H2Q9HBD1 1191 aaKnown RBP9.4□□□□□ -0.9
USP3-217ENST00000560070 ARHGAP28Q9P2N2 729 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 PCDHB12Q9Y5F1 795 aa9.4□□□□□ -0.9
USP3-217ENST00000560070 ARL5CA6NH57 179 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 H3BNC9 293 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 LPXNO60711 386 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 ZC3H11AO75152 810 aaKnown RBP eCLIP9.39□□□□□ -0.91
USP3-217ENST00000560070 DDHD2O94830 711 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 ITGB1P05556 798 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 LINC00271P0C7V0 271 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 MYBP10242 640 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 CA8P35219 290 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 MLH1P40692 756 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 OR1G1P47890 313 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 SCNN1GP51170 649 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 NCKAP1LP55160 1127 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 BCAR1P56945 870 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 ASIC1P78348 528 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 AMPD3Q01432 767 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 ZNF568Q3ZCX4 644 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 KCNT2Q6UVM3 1135 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 FAM43BQ6ZT52 329 aaPredicted RBP9.39□□□□□ -0.91
USP3-217ENST00000560070 ZNF720Q7Z2F6 126 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 CCDC65Q8IXS2 484 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 HACE1Q8IYU2 909 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 CNNM3Q8NE01 707 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 MAFAQ8NHW3 353 aaPredicted RBP9.39□□□□□ -0.91
USP3-217ENST00000560070 URGCPQ8TCY9 931 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 CLP1Q92989 425 aaKnown RBP9.39□□□□□ -0.91
USP3-217ENST00000560070 CCDC51Q96ER9 411 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 ZNF558Q96NG5 402 aa9.39□□□□□ -0.91
USP3-217ENST00000560070 SAMD11Q96NU1 681 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms