RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 MDGA1Q8NFP4 955 aa5.73□□□□□ -1.49
CTDSPL2-207ENST00000559738 OR5M3Q8NGP4 307 aa5.73□□□□□ -1.49
CTDSPL2-207ENST00000559738 WDR66Q8TBY9 1149 aa5.73□□□□□ -1.49
CTDSPL2-207ENST00000559738 TSPEARQ8WU66 669 aa5.73□□□□□ -1.49
CTDSPL2-207ENST00000559738 QRSL1Q9H0R6 528 aaKnown RBP5.73□□□□□ -1.49
CTDSPL2-207ENST00000559738 C14orf119Q9NWQ9 140 aa5.73□□□□□ -1.49
CTDSPL2-207ENST00000559738 AURKAIP1Q9NWT8 199 aaPredicted RBP5.73□□□□□ -1.49
CTDSPL2-207ENST00000559738 PRAMEF4O60810 478 aa5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 CPEP16870 476 aa5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 CTSSP25774 331 aa5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 MCM7P33993 719 aa5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 MAN2A2P49641 1150 aa5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 WNT3AP56704 352 aa5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 CDK17Q00537 523 aa5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 DUSP2Q05923 314 aa5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 MRPL49Q13405 166 aaKnown RBP5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 TUBA3CQ13748 450 aa5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 TUBA3EQ6PEY2 450 aa5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 HTR3DQ70Z44 454 aa5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 KCNK18Q7Z418 384 aa5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 APBB1IPQ7Z5R6 666 aaPredicted RBP5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 GSPT2Q8IYD1 628 aaKnown RBP5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 SNX33Q8WV41 574 aa5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 ATXN2LQ8WWM7 1075 aaKnown RBP5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 ST8SIA2Q92186 375 aa5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 PGBD4Q96DM1 585 aa5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 AHCYL2Q96HN2 611 aaKnown RBP5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 RAX2Q96IS3 184 aa5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 GPR87Q9BY21 358 aa5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 XDHP47989 1333 aa5.72□□□□□ -1.49
CTDSPL2-207ENST00000559738 CADPSQ9ULU8 1353 aa5.71□□□□□ -1.5
CTDSPL2-207ENST00000559738 SBNO2Q9Y2G9 1366 aa5.71□□□□□ -1.5
CTDSPL2-207ENST00000559738 MFAP3LO75121 409 aa5.71□□□□□ -1.5
CTDSPL2-207ENST00000559738 CANXP27824 592 aaKnown RBP5.71□□□□□ -1.5
CTDSPL2-207ENST00000559738 GPR3P46089 330 aa5.71□□□□□ -1.5
CTDSPL2-207ENST00000559738 ERVK-21P61565 698 aa5.71□□□□□ -1.5
CTDSPL2-207ENST00000559738 CCT2P78371 535 aaKnown RBP5.71□□□□□ -1.5
CTDSPL2-207ENST00000559738 MRPS9P82933 396 aaKnown RBP5.71□□□□□ -1.5
CTDSPL2-207ENST00000559738 SLC25A3Q00325 362 aa5.71□□□□□ -1.5
CTDSPL2-207ENST00000559738 MEF2AQ02078 507 aaPredicted RBP5.71□□□□□ -1.5
CTDSPL2-207ENST00000559738 C19orf54Q5BKX5 351 aa5.71□□□□□ -1.5
CTDSPL2-207ENST00000559738 FNDC7Q5VTL7 733 aa5.71□□□□□ -1.5
CTDSPL2-207ENST00000559738 SPATS2Q86XZ4 545 aaKnown RBP5.71□□□□□ -1.5
CTDSPL2-207ENST00000559738 ATL2Q8NHH9 583 aa5.71□□□□□ -1.5
CTDSPL2-207ENST00000559738 IL17RAQ96F46 866 aa5.71□□□□□ -1.5
CTDSPL2-207ENST00000559738 MNTQ99583 582 aa5.71□□□□□ -1.5
CTDSPL2-207ENST00000559738 LSM14BQ9BX40 385 aaKnown RBP5.71□□□□□ -1.5
CTDSPL2-207ENST00000559738 CPEB1Q9BZB8 566 aaKnown RBP5.71□□□□□ -1.5
CTDSPL2-207ENST00000559738 SLITRK6Q9H5Y7 841 aa5.71□□□□□ -1.5
CTDSPL2-207ENST00000559738 ZMYM3Q14202 1370 aa5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 PHLDB1Q86UU1 1377 aa5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 IPO13O94829 963 aaKnown RBP5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 GYPEP15421 78 aa5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 GNAT2P19087 354 aa5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 HK1P19367 917 aa5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 GZMKP49863 264 aa5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 PTTG1IPP53801 180 aa5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 SRSF2Q01130 221 aaKnown RBP5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 CNGB1Q14028 1251 aaPredicted RBP5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 TOB2Q14106 344 aaPredicted RBP5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 MUM1Q2TAK8 710 aa5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 RNF219Q5W0B1 726 aaPredicted RBP5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 ZNF662Q6ZS27 426 aa5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 DDX42Q86XP3 938 aaKnown RBP eCLIP5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 GLB1L3Q8NCI6 653 aaPredicted RBP5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 NEU4Q8WWR8 484 aaPredicted RBP5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 MENTQ9BUN1 341 aa5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 SPC25Q9HBM1 224 aa5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 PARPBPQ9NWS1 579 aa5.7□□□□□ -1.5
CTDSPL2-207ENST00000559738 GRXCR1A8MXD5 290 aa5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 DNAJC6O75061 913 aa5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 ITGA10O75578 1167 aa5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 FAPQ12884 760 aa5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 CSRP2Q16527 193 aa5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 CRB2Q5IJ48 1285 aa5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 TOR2AQ5JU69 321 aa5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 NAIF1Q69YI7 327 aaPredicted RBP5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 XYLT1Q86Y38 959 aa5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 ZNF483Q8TF39 744 aaPredicted RBP5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 AUTS2Q8WXX7 1259 aa5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 CPPED1Q9BRF8 314 aaPredicted RBP5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 TRIM8Q9BZR9 551 aa5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 EPC1Q9H2F5 836 aa5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 TMX1Q9H3N1 280 aa5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 MMRN2Q9H8L6 949 aa5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 IFT122Q9HBG6 1241 aa5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 CCM2LQ9NUG4 571 aaPredicted RBP5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 GPRC5DQ9NZD1 345 aa5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 SCOCQ9UIL1 159 aa5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 REXO2Q9Y3B8 237 aaKnown RBP5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 RPTORQ8N122 1335 aa5.69□□□□□ -1.5
CTDSPL2-207ENST00000559738 K7ESF4 209 aa5.68□□□□□ -1.5
CTDSPL2-207ENST00000559738 ADCY6O43306 1168 aa5.68□□□□□ -1.5
CTDSPL2-207ENST00000559738 TGFB2P61812 414 aa5.68□□□□□ -1.5
CTDSPL2-207ENST00000559738 ADRM1Q16186 407 aa5.68□□□□□ -1.5
CTDSPL2-207ENST00000559738 MST1LQ2TV78 715 aa5.68□□□□□ -1.5
CTDSPL2-207ENST00000559738 DCAF17Q5H9S7 520 aaPredicted RBP5.68□□□□□ -1.5
CTDSPL2-207ENST00000559738 ANKS6Q68DC2 871 aa5.68□□□□□ -1.5
CTDSPL2-207ENST00000559738 BTNL9Q6UXG8 535 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms