RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 MRE11P49959 708 aa12.97□□□□□ -0.33
USP3-214ENST00000559718 ITIH3Q06033 890 aa12.97□□□□□ -0.33
USP3-214ENST00000559718 BMS1Q14692 1282 aaKnown RBP12.97□□□□□ -0.33
USP3-214ENST00000559718 CALCRLQ16602 461 aa12.97□□□□□ -0.33
USP3-214ENST00000559718 CES5AQ6NT32 575 aa12.97□□□□□ -0.33
USP3-214ENST00000559718 EXOC8Q8IYI6 725 aa12.97□□□□□ -0.33
USP3-214ENST00000559718 TMEM87AQ8NBN3 555 aa12.97□□□□□ -0.33
USP3-214ENST00000559718 SMG8Q8ND04 991 aaKnown RBP12.97□□□□□ -0.33
USP3-214ENST00000559718 URGCPQ8TCY9 931 aa12.97□□□□□ -0.33
USP3-214ENST00000559718 ASAP3Q8TDY4 903 aa12.97□□□□□ -0.33
USP3-214ENST00000559718 RSPH1Q8WYR4 309 aa12.97□□□□□ -0.33
USP3-214ENST00000559718 MARVELD3Q96A59 401 aa12.97□□□□□ -0.33
USP3-214ENST00000559718 CPB2Q96IY4 423 aa12.97□□□□□ -0.33
USP3-214ENST00000559718 PHOX2BQ99453 314 aa12.97□□□□□ -0.33
USP3-214ENST00000559718 KCNH6Q9H252 994 aa12.97□□□□□ -0.33
USP3-214ENST00000559718 SMOC2Q9H3U7 446 aa12.97□□□□□ -0.33
USP3-214ENST00000559718 HES2Q9Y543 173 aa12.97□□□□□ -0.33
USP3-214ENST00000559718 IRAK3Q9Y616 596 aa12.97□□□□□ -0.33
USP3-214ENST00000559718 PIEZO1Q92508 2521 aa12.97□□□□□ -0.33
USP3-214ENST00000559718 ASAP2O43150 1006 aa12.96□□□□□ -0.33
USP3-214ENST00000559718 GAS2O43903 313 aaKnown RBP12.96□□□□□ -0.33
USP3-214ENST00000559718 TSPAN1O60635 241 aa12.96□□□□□ -0.33
USP3-214ENST00000559718 PDGFBP01127 241 aaPredicted RBP12.96□□□□□ -0.33
USP3-214ENST00000559718 NEFLP07196 543 aa12.96□□□□□ -0.33
USP3-214ENST00000559718 NCLP19338 710 aaKnown RBP12.96□□□□□ -0.33
USP3-214ENST00000559718 VCPP55072 806 aaKnown RBP12.96□□□□□ -0.33
USP3-214ENST00000559718 PTENP60484 403 aa12.96□□□□□ -0.33
USP3-214ENST00000559718 ST3GAL1Q11201 340 aa12.96□□□□□ -0.33
USP3-214ENST00000559718 PTPN14Q15678 1187 aa12.96□□□□□ -0.33
USP3-214ENST00000559718 ZBTB33Q86T24 672 aa12.96□□□□□ -0.33
USP3-214ENST00000559718 SUGP1Q8IWZ8 645 aaKnown RBP12.96□□□□□ -0.33
USP3-214ENST00000559718 DIS3L2Q8IYB7 885 aaKnown RBP12.96□□□□□ -0.33
USP3-214ENST00000559718 FBXL6Q8N531 539 aa12.96□□□□□ -0.33
USP3-214ENST00000559718 KREMEN2Q8NCW0 462 aa12.96□□□□□ -0.33
USP3-214ENST00000559718 TCP11Q8WWU5 503 aa12.96□□□□□ -0.33
USP3-214ENST00000559718 HSD17B14Q9BPX1 270 aa12.96□□□□□ -0.33
USP3-214ENST00000559718 TTC12Q9H892 705 aaPredicted RBP12.96□□□□□ -0.33
USP3-214ENST00000559718 BRMS1Q9HCU9 246 aa12.96□□□□□ -0.33
USP3-214ENST00000559718 PCDHA12Q9UN75 941 aa12.96□□□□□ -0.33
USP3-214ENST00000559718 NR2E1Q9Y466 385 aa12.96□□□□□ -0.33
USP3-214ENST00000559718 IPPQ9Y573 584 aa12.96□□□□□ -0.33
USP3-214ENST00000559718 CNTNAP2Q9UHC6 1331 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 INO80B-WBP1J3KQ70 363 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 NRP1O14786 923 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 LILRB3O75022 631 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 ERLIN2O94905 339 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 LYPLA2O95372 231 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 ALDH2P05091 517 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 ASGR2P07307 311 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 CNPP09543 421 aaKnown RBP12.95□□□□□ -0.34
USP3-214ENST00000559718 MLH1P40692 756 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 TXKP42681 527 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 MTHFRP42898 656 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 CAPSQ13938 189 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 GIT2Q14161 759 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 AMHR2Q16671 573 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 TMC5Q6UXY8 1006 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 TAS1R1Q7RTX1 841 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 CABP7Q86V35 215 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 PIGOQ8TEQ8 1089 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 NECTIN4Q96NY8 510 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 KLHL5Q96PQ7 755 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 FAM193BQ96PV7 902 aaPredicted RBP12.95□□□□□ -0.34
USP3-214ENST00000559718 GAD1Q99259 594 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 APOL6Q9BWW8 343 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 TMEM60Q9H2L4 133 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 DZANK1Q9NVP4 752 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 MARCH5Q9NX47 278 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 MIOSQ9NXC5 875 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 KANSL3Q9P2N6 904 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 FAN1Q9Y2M0 1017 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 PRG3Q9Y2Y8 225 aaPredicted RBP12.95□□□□□ -0.34
USP3-214ENST00000559718 KMT2EQ8IZD2 1858 aa12.95□□□□□ -0.34
USP3-214ENST00000559718 CARNS1A5YM72 827 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 F8W810 466 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 C2CD2LO14523 706 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 B4GALT5O43286 388 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 NEMFO60524 1076 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 BRD1O95696 1058 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 ITGA4P13612 1032 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 ARF4P18085 180 aaPredicted RBP12.94□□□□□ -0.34
USP3-214ENST00000559718 ATP2B1P20020 1258 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 GLRA2P23416 452 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 KLRC2P26717 231 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 ARL2P36404 184 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 RARRES1P49788 294 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 NEK4P51957 841 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 GUCY1B3Q02153 619 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 MBTD1Q05BQ5 628 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 TCF15Q12870 199 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 MXD4Q14582 209 aaPredicted RBP12.94□□□□□ -0.34
USP3-214ENST00000559718 ATAT1Q5SQI0 421 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 KIAA1841Q6NSI8 718 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 NOTUMQ6P988 496 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 CDR2LQ86X02 465 aaPredicted RBP12.94□□□□□ -0.34
USP3-214ENST00000559718 COLGALT2Q8IYK4 626 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 RIPOR3Q96MK2 946 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 ZFP42Q96MM3 310 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 MTMR9Q96QG7 549 aa12.94□□□□□ -0.34
USP3-214ENST00000559718 TMEM175Q9BSA9 504 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms