RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 SFR1Q86XK3 245 aa20.6■□□□□ 0.89
CASC4-209ENST00000559222 PRIMPOLQ96LW4 560 aa20.6■□□□□ 0.89
CASC4-209ENST00000559222 TARS2Q9BW92 718 aaKnown RBP20.6■□□□□ 0.89
CASC4-209ENST00000559222 STXBP5LQ9Y2K9 1186 aa20.6■□□□□ 0.89
CASC4-209ENST00000559222 EYSQ5T1H1 3165 aa20.6■□□□□ 0.89
CASC4-209ENST00000559222 CUL9Q8IWT3 2517 aa20.59■□□□□ 0.89
CASC4-209ENST00000559222 REV3LO60673 3130 aa20.59■□□□□ 0.89
CASC4-209ENST00000559222 A0A1B0GVL5 298 aa20.59■□□□□ 0.89
CASC4-209ENST00000559222 K7ERI5 159 aa20.59■□□□□ 0.89
CASC4-209ENST00000559222 POLR2DO15514 142 aaKnown RBP20.59■□□□□ 0.89
CASC4-209ENST00000559222 OFD1O75665 1012 aa20.59■□□□□ 0.89
CASC4-209ENST00000559222 CSPG5O95196 566 aa20.59■□□□□ 0.89
CASC4-209ENST00000559222 IGFBP4P22692 258 aa20.59■□□□□ 0.89
CASC4-209ENST00000559222 AKAP5P24588 427 aa20.59■□□□□ 0.89
CASC4-209ENST00000559222 NMT1P30419 496 aaKnown RBP20.59■□□□□ 0.89
CASC4-209ENST00000559222 BMPR1AP36894 532 aa20.59■□□□□ 0.89
CASC4-209ENST00000559222 ANP32AP39687 249 aaKnown RBP20.59■□□□□ 0.89
CASC4-209ENST00000559222 EFNA5P52803 228 aa20.59■□□□□ 0.89
CASC4-209ENST00000559222 MYCT1Q8N699 235 aa20.59■□□□□ 0.89
CASC4-209ENST00000559222 CCDC51Q96ER9 411 aa20.59■□□□□ 0.89
CASC4-209ENST00000559222 GAS2L1Q99501 681 aaPredicted RBP20.59■□□□□ 0.89
CASC4-209ENST00000559222 NTPCRQ9BSD7 190 aaKnown RBP20.59■□□□□ 0.89
CASC4-209ENST00000559222 FGFBP2Q9BYJ0 223 aa20.59■□□□□ 0.89
CASC4-209ENST00000559222 IKZF4Q9H2S9 585 aa20.59■□□□□ 0.89
CASC4-209ENST00000559222 GOLPH3LQ9H4A5 285 aa20.59■□□□□ 0.89
CASC4-209ENST00000559222 TMEM134Q9H6X4 195 aa20.59■□□□□ 0.89
CASC4-209ENST00000559222 C17orf75Q9HAS0 396 aa20.59■□□□□ 0.89
CASC4-209ENST00000559222 K7ENM7 598 aa20.58■□□□□ 0.89
CASC4-209ENST00000559222 ABLIM1O14639 778 aa20.58■□□□□ 0.89
CASC4-209ENST00000559222 N4BP3O15049 544 aa20.58■□□□□ 0.89
CASC4-209ENST00000559222 TBCAO75347 108 aaKnown RBP20.58■□□□□ 0.89
CASC4-209ENST00000559222 PFKFB1P16118 471 aa20.58■□□□□ 0.89
CASC4-209ENST00000559222 TMEM132AQ24JP5 1023 aa20.58■□□□□ 0.89
CASC4-209ENST00000559222 ATF7IP2Q5U623 682 aa20.58■□□□□ 0.89
CASC4-209ENST00000559222 GRAMD1CQ8IYS0 662 aa20.58■□□□□ 0.89
CASC4-209ENST00000559222 ABI1Q8IZP0 508 aa20.58■□□□□ 0.89
CASC4-209ENST00000559222 CEP120Q8N960 986 aa20.58■□□□□ 0.89
CASC4-209ENST00000559222 COLGALT1Q8NBJ5 622 aa20.58■□□□□ 0.89
CASC4-209ENST00000559222 SLC17A8Q8NDX2 589 aa20.58■□□□□ 0.89
CASC4-209ENST00000559222 ZBTB45Q96K62 511 aaPredicted RBP20.58■□□□□ 0.89
CASC4-209ENST00000559222 ZFP42Q96MM3 310 aa20.58■□□□□ 0.89
CASC4-209ENST00000559222 ACO2Q99798 780 aaKnown RBP20.58■□□□□ 0.89
CASC4-209ENST00000559222 RSAD1Q9HA92 442 aa20.58■□□□□ 0.89
CASC4-209ENST00000559222 PARVGQ9HBI0 331 aa20.58■□□□□ 0.89
CASC4-209ENST00000559222 MIOSQ9NXC5 875 aa20.58■□□□□ 0.89
CASC4-209ENST00000559222 ATP6V1DQ9Y5K8 247 aa20.58■□□□□ 0.89
CASC4-209ENST00000559222 MTCH2Q9Y6C9 303 aa20.58■□□□□ 0.89
CASC4-209ENST00000559222 PRRC2BQ5JSZ5 2229 aaKnown RBP20.58■□□□□ 0.88
CASC4-209ENST00000559222 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.57■□□□□ 0.88
CASC4-209ENST00000559222 C5orf67F2Z3F1 127 aa20.57■□□□□ 0.88
CASC4-209ENST00000559222 GRM6O15303 877 aa20.57■□□□□ 0.88
CASC4-209ENST00000559222 HOXA2O43364 376 aa20.57■□□□□ 0.88
CASC4-209ENST00000559222 SKIP12755 728 aa20.57■□□□□ 0.88
CASC4-209ENST00000559222 ITGA4P13612 1032 aa20.57■□□□□ 0.88
CASC4-209ENST00000559222 MLH1P40692 756 aa20.57■□□□□ 0.88
CASC4-209ENST00000559222 NCBP1Q09161 790 aaKnown RBP20.57■□□□□ 0.88
CASC4-209ENST00000559222 GPM6BQ13491 265 aa20.57■□□□□ 0.88
CASC4-209ENST00000559222 ZC2HC1CQ53FD0 456 aaPredicted RBP20.57■□□□□ 0.88
CASC4-209ENST00000559222 SPOUT1Q5T280 376 aaKnown RBP20.57■□□□□ 0.88
CASC4-209ENST00000559222 HAUS6Q7Z4H7 955 aa20.57■□□□□ 0.88
CASC4-209ENST00000559222 LRRC43Q8N309 656 aa20.57■□□□□ 0.88
CASC4-209ENST00000559222 HAPLN2Q9GZV7 340 aa20.57■□□□□ 0.88
CASC4-209ENST00000559222 ALG13Q9NP73 1137 aaKnown RBP20.57■□□□□ 0.88
CASC4-209ENST00000559222 TBC1D13Q9NVG8 400 aa20.57■□□□□ 0.88
CASC4-209ENST00000559222 KBTBD4Q9NVX7 518 aa20.57■□□□□ 0.88
CASC4-209ENST00000559222 FAM13BQ9NYF5 915 aa20.57■□□□□ 0.88
CASC4-209ENST00000559222 KLK14Q9P0G3 267 aa20.57■□□□□ 0.88
CASC4-209ENST00000559222 TBC1D7Q9P0N9 293 aa20.57■□□□□ 0.88
CASC4-209ENST00000559222 LARSQ9P2J5 1176 aaKnown RBP20.57■□□□□ 0.88
CASC4-209ENST00000559222 SERTAD1Q9UHV2 236 aa20.57■□□□□ 0.88
CASC4-209ENST00000559222 KCNH3Q9ULD8 1083 aa20.57■□□□□ 0.88
CASC4-209ENST00000559222 HPSEQ9Y251 543 aa20.57■□□□□ 0.88
CASC4-209ENST00000559222 H3BNC9 293 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 ACTN4O43707 911 aaKnown RBP20.56■□□□□ 0.88
CASC4-209ENST00000559222 TRAK2O60296 914 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 ITGB1P05556 798 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 DNAJB1P25685 340 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 NOMO2Q5JPE7 1267 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 ADALQ6DHV7 355 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 GLB1LQ6UWU2 654 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 ZBTB33Q86T24 672 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 ZNF280BQ86YH2 543 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 MICALL1Q8N3F8 863 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 KLHL23Q8NBE8 558 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 HPS3Q969F9 1004 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 PGBD4Q96DM1 585 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 SAMD11Q96NU1 681 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 GAD1Q99259 594 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 MRPL4Q9BYD3 311 aaKnown RBP20.56■□□□□ 0.88
CASC4-209ENST00000559222 TRIM6Q9C030 488 aaPredicted RBP20.56■□□□□ 0.88
CASC4-209ENST00000559222 CDT1Q9H211 546 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 PTPRHQ9HD43 1115 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 RNF216Q9NWF9 866 aaPredicted RBP20.56■□□□□ 0.88
CASC4-209ENST00000559222 SNTG2Q9NY99 539 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 DNAJB4Q9UDY4 337 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 TNFSF13BQ9Y275 285 aa20.56■□□□□ 0.88
CASC4-209ENST00000559222 RBM19Q9Y4C8 960 aaKnown RBP20.56■□□□□ 0.88
CASC4-209ENST00000559222 DDHD2O94830 711 aa20.55■□□□□ 0.88
CASC4-209ENST00000559222 POMCP01189 267 aa20.55■□□□□ 0.88
CASC4-209ENST00000559222 IDEP14735 1019 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms