RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 ACCSQ96QU6 501 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 RPS6KC1Q96S38 1066 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 FAM129AQ9BZQ8 928 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 HSPBP1Q9NZL4 362 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 LARSQ9P2J5 1176 aaKnown RBP17.86■□□□□ 0.45
SPG11-215ENST00000559193 ZBTB21Q9ULJ3 1066 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 LOXHD1Q8IVV2 1947 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 MTA2O94776 668 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 ALAS1P13196 640 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 USP8P40818 1118 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 ZYXQ15942 572 aaKnown RBP17.86■□□□□ 0.45
SPG11-215ENST00000559193 GRIPAP1Q4V328 841 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 SWT1Q5T5J6 900 aaKnown RBP17.86■□□□□ 0.45
SPG11-215ENST00000559193 ARMC9Q7Z3E5 817 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 MIER3Q7Z3K6 550 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 LDHDQ86WU2 507 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 CACNA2D3Q8IZS8 1091 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 FBXO28Q9NVF7 368 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 TCRBV7S2A1N4TA0A589 114 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 MAPTP10636 758 aaKnown RBP17.86■□□□□ 0.45
SPG11-215ENST00000559193 SLC29A2Q14542 456 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 XXYLT1Q8NBI6 393 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 CENPTQ96BT3 561 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 TMEM117Q9H0C3 514 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 ADAM7Q9H2U9 754 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 ACP6Q9NPH0 428 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.86■□□□□ 0.451e-8■■■■■ 129.8
SPG11-215ENST00000559193 TRPC5Q9UL62 973 aaPredicted RBP17.86■□□□□ 0.45
SPG11-215ENST00000559193 PYGMP11217 842 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 ALCAMQ13740 583 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 SEL1L2Q5TEA6 688 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 CCDC137Q6PK04 289 aaKnown RBP17.85■□□□□ 0.45
SPG11-215ENST00000559193 FAM71AQ8IYT1 594 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 KREMEN1Q96MU8 473 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 SEMA4AQ9H3S1 761 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 AZI2Q9H6S1 392 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 ACTR5Q9H9F9 607 aaPredicted RBP17.85■□□□□ 0.45
SPG11-215ENST00000559193 TRPC6Q9Y210 931 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 ZHX2Q9Y6X8 837 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 ANKRD63C9JTQ0 380 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 DNM1LO00429 736 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 GGPS1O95749 300 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 P4HBP07237 508 aaKnown RBP17.85■□□□□ 0.45
SPG11-215ENST00000559193 ADRB2P07550 413 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 PLS3P13797 630 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 CHN1P15882 459 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 MMP13P45452 471 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 RARRES1P49788 294 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 SMTNP53814 917 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 ANKRD20A8PQ5CZ79 823 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 CHADLQ6NUI6 762 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 IL31RAQ8NI17 732 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 CHMP6Q96FZ7 201 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 BTBD6Q96KE9 485 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 KCNH7Q9NS40 1196 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 COL20A1Q9P218 1284 aa17.85■□□□□ 0.45
SPG11-215ENST00000559193 TLDC2A0PJX2 215 aa17.84■□□□□ 0.45
SPG11-215ENST00000559193 DHX15O43143 795 aaKnown RBP17.84■□□□□ 0.45
SPG11-215ENST00000559193 CTNND1O60716 968 aaKnown RBP17.84■□□□□ 0.45
SPG11-215ENST00000559193 RASSF9O75901 435 aa17.84■□□□□ 0.45
SPG11-215ENST00000559193 MXI1P50539 228 aa17.84■□□□□ 0.45
SPG11-215ENST00000559193 CDR1P51861 262 aa17.84■□□□□ 0.45
SPG11-215ENST00000559193 MNAT1P51948 309 aa17.84■□□□□ 0.45
SPG11-215ENST00000559193 CYP1B1Q16678 543 aa17.84■□□□□ 0.45
SPG11-215ENST00000559193 GKAP1Q5VSY0 366 aaPredicted RBP17.84■□□□□ 0.45
SPG11-215ENST00000559193 CPLX4Q7Z7G2 160 aa17.84■□□□□ 0.45
SPG11-215ENST00000559193 ATXN2LQ8WWM7 1075 aaKnown RBP17.84■□□□□ 0.45
SPG11-215ENST00000559193 WNT8AQ9H1J5 351 aa17.84■□□□□ 0.45
SPG11-215ENST00000559193 GOLGA6L7A0A1B0GV03 622 aa17.84■□□□□ 0.45
SPG11-215ENST00000559193 CLRN2A0PK11 232 aa17.84■□□□□ 0.45
SPG11-215ENST00000559193 SMIM23A6NLE4 172 aa17.84■□□□□ 0.45
SPG11-215ENST00000559193 CCDC169A6NNP5 214 aa17.84■□□□□ 0.45
SPG11-215ENST00000559193 PODXLO00592 558 aa17.84■□□□□ 0.45
SPG11-215ENST00000559193 IFI35P80217 286 aaPredicted RBP17.84■□□□□ 0.45
SPG11-215ENST00000559193 SIX1Q15475 284 aaPredicted RBP17.84■□□□□ 0.45
SPG11-215ENST00000559193 MSL1Q68DK7 614 aa17.84■□□□□ 0.45
SPG11-215ENST00000559193 SLC47A2Q86VL8 602 aa17.84■□□□□ 0.45
SPG11-215ENST00000559193 SELENOSQ9BQE4 189 aa17.84■□□□□ 0.45
SPG11-215ENST00000559193 SH2D3AQ9BRG2 576 aa17.84■□□□□ 0.45
SPG11-215ENST00000559193 SLC40A1Q9NP59 571 aa17.84■□□□□ 0.45
SPG11-215ENST00000559193 DBR1Q9UK59 544 aaKnown RBP17.84■□□□□ 0.45
SPG11-215ENST00000559193 USP20Q9Y2K6 914 aa17.84■□□□□ 0.45
SPG11-215ENST00000559193 YDJCA8MPS7 323 aa17.83■□□□□ 0.44
SPG11-215ENST00000559193 CYP26A1O43174 497 aa17.83■□□□□ 0.44
SPG11-215ENST00000559193 MMEP08473 750 aa17.83■□□□□ 0.44
SPG11-215ENST00000559193 GZMAP12544 262 aa17.83■□□□□ 0.44
SPG11-215ENST00000559193 FGFR4P22455 802 aa17.83■□□□□ 0.44
SPG11-215ENST00000559193 GBP1P32455 592 aa17.83■□□□□ 0.44
SPG11-215ENST00000559193 HSD17B4P51659 736 aa17.83■□□□□ 0.44
SPG11-215ENST00000559193 FMO1Q01740 532 aa17.83■□□□□ 0.44
SPG11-215ENST00000559193 SLC13A5Q86YT5 568 aaPredicted RBP17.83■□□□□ 0.44
SPG11-215ENST00000559193 ZNF564Q8TBZ8 553 aaPredicted RBP17.83■□□□□ 0.44
SPG11-215ENST00000559193 MORC4Q8TE76 937 aa17.83■□□□□ 0.44
SPG11-215ENST00000559193 AKT1S1Q96B36 256 aa17.83■□□□□ 0.44
SPG11-215ENST00000559193 ZNF317Q96PQ6 595 aaPredicted RBP17.83■□□□□ 0.44
SPG11-215ENST00000559193 CNOT7Q9UIV1 285 aaKnown RBP17.83■□□□□ 0.44
SPG11-215ENST00000559193 MAPK13O15264 365 aa17.83■□□□□ 0.44
SPG11-215ENST00000559193 PLA2G6O60733 806 aa17.83■□□□□ 0.44
SPG11-215ENST00000559193 COILP38432 576 aaPredicted RBP17.83■□□□□ 0.44
SPG11-215ENST00000559193 GTF2BQ00403 316 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms