RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 GZMAP12544 262 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 NF2P35240 595 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 RFC5P40937 340 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 SP4Q02446 784 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 EMC2Q15006 297 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 SLFN12LQ6IEE8 588 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 CYFIP1Q7L576 1253 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 FAM71AQ8IYT1 594 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 AENQ8WTP8 325 aaKnown RBP12.19□□□□□ -0.46
CLPX-204ENST00000559152 SLC7A3Q8WY07 619 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 BSNDQ8WZ55 320 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 CCDC127Q96BQ5 260 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 NT5C1BQ96P26 610 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 NIFKQ9BYG3 293 aaKnown RBP12.19□□□□□ -0.46
CLPX-204ENST00000559152 XPNPEP1Q9NQW7 623 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 STXBP5LQ9Y2K9 1186 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 IGKV6D-21A0A0A0MT36 114 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 LRRIQ3A6PVS8 624 aaPredicted RBP12.19□□□□□ -0.46
CLPX-204ENST00000559152 PGRMC1O00264 195 aaKnown RBP12.19□□□□□ -0.46
CLPX-204ENST00000559152 SLC25A27O95847 323 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 NAMPTP43490 491 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 LIG4P49917 911 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 IRX3P78415 501 aaPredicted RBP12.19□□□□□ -0.46
CLPX-204ENST00000559152 MAP2K1Q02750 393 aaPredicted RBP12.19□□□□□ -0.46
CLPX-204ENST00000559152 CYP24A1Q07973 514 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 NNTQ13423 1086 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 MTERF2Q49AM1 385 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 TREML2Q5T2D2 321 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 FAM160B1Q5W0V3 765 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 KCNV1Q6PIU1 500 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 NT5DC3Q86UY8 548 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 ARHGEF19Q8IW93 802 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 EIF1ADQ8N9N8 165 aaKnown RBP12.19□□□□□ -0.46
CLPX-204ENST00000559152 OLIG1Q8TAK6 271 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 PLEKHO2Q8TD55 490 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 CCDC102AQ96A19 550 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 SAAL1Q96ER3 474 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 HES6Q96HZ4 224 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.19□□□□□ -0.462e-7■□□□□ 8.6
CLPX-204ENST00000559152 KIFC3Q9BVG8 833 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 SPATC1LQ9H0A9 340 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 ISCUQ9H1K1 167 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 RAB20Q9NX57 234 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 TMEM59LQ9UK28 342 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 PACSIN2Q9UNF0 486 aaPredicted RBP12.19□□□□□ -0.46
CLPX-204ENST00000559152 SYNGAP1Q96PV0 1343 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 A0A0G2JLL6 359 aaPredicted RBP12.18□□□□□ -0.46
CLPX-204ENST00000559152 EXTL3O43909 919 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 CEP104O60308 925 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 RTN2O75298 545 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 ZMYND10O75800 440 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 LDHAP00338 332 aaKnown RBP12.18□□□□□ -0.46
CLPX-204ENST00000559152 EDNRBP24530 442 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 DNA2P51530 1060 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 SEPT14Q6ZU15 432 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 PRRT2Q7Z6L0 340 aaPredicted RBP12.18□□□□□ -0.46
CLPX-204ENST00000559152 ERO1BQ86YB8 467 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 EXOC8Q8IYI6 725 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 PPM1KQ8N3J5 372 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 NAP1L3Q99457 506 aaPredicted RBP12.18□□□□□ -0.46
CLPX-204ENST00000559152 PORCNQ9H237 461 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 DHX33Q9H6R0 707 aaKnown RBP12.18□□□□□ -0.46
CLPX-204ENST00000559152 GDF3Q9NR23 364 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 EHD2Q9NZN4 543 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 DMGDHQ9UI17 866 aaKnown RBP12.18□□□□□ -0.46
CLPX-204ENST00000559152 TTC7AQ9ULT0 858 aaPredicted RBP12.18□□□□□ -0.46
CLPX-204ENST00000559152 HPCAL4Q9UM19 191 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 DDNO94850 711 aaPredicted RBP12.18□□□□□ -0.46
CLPX-204ENST00000559152 GPC5P78333 572 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 SP2Q02086 613 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 PAK2Q13177 524 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 PPP2R5EQ16537 467 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 SLC39A4Q6P5W5 647 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 GADL1Q6ZQY3 521 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 NCAPG2Q86XI2 1143 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 ANKRD13AQ8IZ07 590 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 RPUSD2Q8IZ73 545 aaKnown RBP12.18□□□□□ -0.46
CLPX-204ENST00000559152 RASGEF1CQ8N431 466 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 DEPTORQ8TB45 409 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 MORC4Q8TE76 937 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 SCFD2Q8WU76 684 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 HDAC7Q8WUI4 952 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 SHC3Q92529 594 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 CAVIN3Q969G5 261 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 EXOC4Q96A65 974 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 SMARCAL1Q9NZC9 954 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 STYXL1Q9Y6J8 313 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 LOC285556D6RIA3 1793 aa12.18□□□□□ -0.46
CLPX-204ENST00000559152 H3BQF6 201 aa12.17□□□□□ -0.46
CLPX-204ENST00000559152 IRF6O14896 467 aa12.17□□□□□ -0.46
CLPX-204ENST00000559152 BUB1BO60566 1050 aaPredicted RBP12.17□□□□□ -0.46
CLPX-204ENST00000559152 PIGRP01833 764 aa12.17□□□□□ -0.46
CLPX-204ENST00000559152 ABCB4P21439 1286 aa12.17□□□□□ -0.46
CLPX-204ENST00000559152 USP8P40818 1118 aa12.17□□□□□ -0.46
CLPX-204ENST00000559152 CNTN2Q02246 1040 aa12.17□□□□□ -0.46
CLPX-204ENST00000559152 GCNT1Q02742 428 aa12.17□□□□□ -0.46
CLPX-204ENST00000559152 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.17□□□□□ -0.46
CLPX-204ENST00000559152 METTL13Q8N6R0 699 aa12.17□□□□□ -0.46
CLPX-204ENST00000559152 GOLGA6L1Q8N7Z2 621 aa12.17□□□□□ -0.46
CLPX-204ENST00000559152 ZSWIM2Q8NEG5 633 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms