RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.34■□□□□ 0.37
CDC42BPB-204ENST00000559043 V9GYY5 206 aaPredicted RBP17.34■□□□□ 0.37
CDC42BPB-204ENST00000559043 CCDC85CA6NKD9 419 aa17.33■□□□□ 0.37
CDC42BPB-204ENST00000559043 SLC16A4O15374 487 aa17.33■□□□□ 0.37
CDC42BPB-204ENST00000559043 CSDE1O75534 798 aaKnown RBP17.33■□□□□ 0.37
CDC42BPB-204ENST00000559043 URI1O94763 535 aaPredicted RBP17.33■□□□□ 0.37
CDC42BPB-204ENST00000559043 TMOD1P28289 359 aa17.33■□□□□ 0.37
CDC42BPB-204ENST00000559043 KRT9P35527 623 aa17.33■□□□□ 0.37
CDC42BPB-204ENST00000559043 NLRP11P59045 1033 aaKnown RBP17.33■□□□□ 0.37
CDC42BPB-204ENST00000559043 PTK7Q13308 1070 aa17.33■□□□□ 0.37
CDC42BPB-204ENST00000559043 KIZQ2M2Z5 673 aa17.33■□□□□ 0.37
CDC42BPB-204ENST00000559043 ZC2HC1CQ53FD0 456 aaPredicted RBP17.33■□□□□ 0.37
CDC42BPB-204ENST00000559043 CENPPQ6IPU0 288 aa17.33■□□□□ 0.37
CDC42BPB-204ENST00000559043 TAF2Q6P1X5 1199 aa17.33■□□□□ 0.37
CDC42BPB-204ENST00000559043 FAM114A1Q8IWE2 563 aa17.33■□□□□ 0.37
CDC42BPB-204ENST00000559043 LRRN4CLQ8ND94 238 aa17.33■□□□□ 0.37
CDC42BPB-204ENST00000559043 ZNF397Q8NF99 534 aaPredicted RBP17.33■□□□□ 0.37
CDC42BPB-204ENST00000559043 TUBGCP2Q9BSJ2 902 aa17.33■□□□□ 0.37
CDC42BPB-204ENST00000559043 MINDY3Q9H8M7 445 aa17.33■□□□□ 0.37
CDC42BPB-204ENST00000559043 A0A087WZ62 844 aa17.33■□□□□ 0.36
CDC42BPB-204ENST00000559043 CHRNA1P02708 482 aa17.33■□□□□ 0.36
CDC42BPB-204ENST00000559043 IQCF3P0C7M6 154 aa17.33■□□□□ 0.36
CDC42BPB-204ENST00000559043 GPC3P51654 580 aa17.33■□□□□ 0.36
CDC42BPB-204ENST00000559043 KCNA1Q09470 495 aa17.33■□□□□ 0.36
CDC42BPB-204ENST00000559043 MXD4Q14582 209 aaPredicted RBP17.33■□□□□ 0.36
CDC42BPB-204ENST00000559043 ZNF720Q7Z2F6 126 aa17.33■□□□□ 0.36
CDC42BPB-204ENST00000559043 RNF149Q8NC42 400 aa17.33■□□□□ 0.36
CDC42BPB-204ENST00000559043 NLRP4Q96MN2 994 aa17.33■□□□□ 0.36
CDC42BPB-204ENST00000559043 FDXACB1Q9BRP7 624 aaPredicted RBP17.33■□□□□ 0.36
CDC42BPB-204ENST00000559043 STRA6Q9BX79 667 aa17.33■□□□□ 0.36
CDC42BPB-204ENST00000559043 IKZF4Q9H2S9 585 aa17.33■□□□□ 0.36
CDC42BPB-204ENST00000559043 CCDC169A6NNP5 214 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 MYBP10242 640 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 GAP43P17677 238 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 HOXD13P35453 343 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 TRAF7Q6Q0C0 670 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 TAS1R3Q7RTX0 852 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 RPAINQ86UA6 219 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 TNS4Q8IZW8 715 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 TMEM161BQ8NDZ6 487 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 TMEM40Q8WWA1 233 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 TOX2Q96NM4 488 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 DNAJC7Q99615 494 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 SEZ6LQ9BYH1 1024 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 SEMA6BQ9H3T3 888 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 C17orf75Q9HAS0 396 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 OLFML3Q9NRN5 406 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 LARSQ9P2J5 1176 aaKnown RBP17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 CAPN11Q9UMQ6 739 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 NOD1Q9Y239 953 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 ATP11BQ9Y2G3 1177 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 USP20Q9Y2K6 914 aa17.32■□□□□ 0.36
CDC42BPB-204ENST00000559043 TTC26A0AVF1 554 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 LRRIQ4A6NIV6 560 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 THPOP40225 353 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 NAMPTP43490 491 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 NCKAP1LP55160 1127 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 PSMD2Q13200 908 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 FAM26FQ5R3K3 315 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 FOXR2Q6PJQ5 311 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 NME8Q8N427 588 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 GUF1Q8N442 669 aaKnown RBP17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 SPIRE2Q8WWL2 714 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 CNOT6LQ96LI5 555 aaKnown RBP17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 GINS2Q9Y248 185 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 UMODL1Q5DID0 1318 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 ASAP2O43150 1006 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 PPP1R37O75864 691 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 EDN1P05305 212 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 CTSHP09668 335 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 CKBP12277 381 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 MGAT3Q09327 533 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 DMP1Q13316 513 aaPredicted RBP17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 ERCC6LQ2NKX8 1250 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 ZNF618Q5T7W0 954 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 EPM2AIP1Q7L775 607 aaPredicted RBP17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 HAUS6Q7Z4H7 955 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 FAM178BQ8IXR5 827 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 OR8K1Q8NGG5 319 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 IFT74Q96LB3 600 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 TTYH3Q9C0H2 523 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 KMT5AQ9NQR1 393 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 ARHGAP28Q9P2N2 729 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 SEL1LQ9UBV2 794 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 MRFAP1Q9Y605 127 aa17.31■□□□□ 0.36
CDC42BPB-204ENST00000559043 TTLL13PA6NNM8 815 aa17.3■□□□□ 0.36
CDC42BPB-204ENST00000559043 PRKCSHP14314 528 aaPredicted RBP17.3■□□□□ 0.36
CDC42BPB-204ENST00000559043 PTENP60484 403 aa17.3■□□□□ 0.36
CDC42BPB-204ENST00000559043 MRPS6P82932 125 aaKnown RBP17.3■□□□□ 0.36
CDC42BPB-204ENST00000559043 MIIPQ5JXC2 388 aa17.3■□□□□ 0.36
CDC42BPB-204ENST00000559043 SCFD1Q8WVM8 642 aa17.3■□□□□ 0.36
CDC42BPB-204ENST00000559043 OSMRQ99650 979 aa17.3■□□□□ 0.36
CDC42BPB-204ENST00000559043 NUP58Q9BVL2 599 aa17.3■□□□□ 0.36
CDC42BPB-204ENST00000559043 CELF4Q9BZC1 486 aaKnown RBP17.3■□□□□ 0.36
CDC42BPB-204ENST00000559043 LUC7L2Q9Y383 392 aaKnown RBP17.3■□□□□ 0.36
CDC42BPB-204ENST00000559043 CDY2AQ9Y6F7 541 aa17.3■□□□□ 0.36
CDC42BPB-204ENST00000559043 A0A0U1RQJ8 604 aa17.29■□□□□ 0.36
CDC42BPB-204ENST00000559043 EFCAB8A8MWE9 144 aa17.29■□□□□ 0.36
CDC42BPB-204ENST00000559043 TADA3O75528 432 aa17.29■□□□□ 0.36
CDC42BPB-204ENST00000559043 PRPF6O94906 941 aaKnown RBP17.29■□□□□ 0.36
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