RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 SPTLC2O15270 562 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 SLC16A4O15374 487 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 GTPBP6O43824 516 aaPredicted RBP13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 PPP6R2O75170 966 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 CSPG5O95196 566 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 NPTXRO95502 500 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 BMP15O95972 392 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 PRKCBP05771 671 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 RB1P06400 928 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 UBA7P41226 1012 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 DLX2Q07687 328 aaPredicted RBP13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 TFDP1Q14186 410 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 SLC39A4Q6P5W5 647 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 SLC39A11Q8N1S5 342 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 MICALL1Q8N3F8 863 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 VN1R2Q8NFZ6 395 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 STAMQ92783 540 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 KCNN1Q92952 543 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 P2RX5Q93086 422 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 MRPL38Q96DV4 380 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 GAD1Q99259 594 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 PAAF1Q9BRP4 392 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 STRA6Q9BX79 667 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 MARCH5Q9NX47 278 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 STK24Q9Y6E0 443 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 TISP43B9A030 160 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 FSCN2O14926 492 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 LINC01565O15544 149 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 SLC26A4O43511 780 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 FGF18O76093 207 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 YEATS4O95619 227 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 POMCP01189 267 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 SSBP05455 408 aaKnown RBP eCLIP13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 GALTP07902 379 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 MAPTP10636 758 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 PLS3P13797 630 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 AXLP30530 894 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 SLC11A1P49279 550 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 NCKAP1LP55160 1127 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 BCAR1P56945 870 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 DSC1Q08554 894 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 HYAL1Q12794 435 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 TCEAL5Q5H9L2 206 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 KCNT2Q6UVM3 1135 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 CD300LGQ6UXG3 332 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 GPBP1Q86WP2 473 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 KRI1Q8N9T8 703 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 GLIS3Q8NEA6 775 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 POF1BQ8WVV4 589 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 KIFAP3Q92845 792 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 ACO2Q99798 780 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 TARS2Q9BW92 718 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 PLVAPQ9BX97 442 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 NT5C3AQ9H0P0 336 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 PRMT7Q9NVM4 692 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 RNF216Q9NWF9 866 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 KLK14Q9P0G3 267 aa13.95□□□□□ -0.18
RABGGTA-207ENST00000558936 ARL5CA6NH57 179 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 CITO14578 2027 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 FAM189A1O60320 539 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 PPP1R37O75864 691 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 CASP1P29466 404 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 NMT1P30419 496 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 MLH1P40692 756 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 CASP5P51878 434 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 KCNA1Q09470 495 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 KCNC3Q14003 757 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 PCBP1Q15365 356 aaKnown RBP eCLIP13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 CTC1Q2NKJ3 1217 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 NOMO2Q5JPE7 1267 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 NOTUMQ6P988 496 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 SLC27A1Q6PCB7 646 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 TAS1R1Q7RTX1 841 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 COLGALT2Q8IYK4 626 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 KCTD17Q8N5Z5 321 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 SPIRE2Q8WWL2 714 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 LARP4BQ92615 738 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 RABGGTAQ92696 567 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 PRIMPOLQ96LW4 560 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 CCDC43Q96MW1 224 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 CDT1Q9H211 546 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 TMEM134Q9H6X4 195 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 RSAD1Q9HA92 442 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 SNTG2Q9NY99 539 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 INPP5FQ9Y2H2 1132 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 RWDD3Q9Y3V2 267 aa13.94□□□□□ -0.18
RABGGTA-207ENST00000558936 FRMD3A2A2Y4 597 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 CCDC169A6NNP5 214 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 HIDE1A8MVS5 230 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 ERLIN2O94905 339 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 GLP2RO95838 553 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 LIG1P18858 919 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 RAB27AP51159 221 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 SCNN1GP51170 649 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 PLCB3Q01970 1234 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 PRPF4BQ13523 1007 aaKnown RBP13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 STK38Q15208 465 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 SEZ6Q53EL9 994 aa13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 ZC2HC1CQ53FD0 456 aaPredicted RBP13.93□□□□□ -0.18
RABGGTA-207ENST00000558936 ZBTB41Q5SVQ8 909 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms