RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 POP1Q99575 1024 aaKnown RBP6.18□□□□□ -1.42
SMAD3-209ENST00000558894 MTRQ99707 1265 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 LLPHQ9BRT6 129 aaKnown RBP6.18□□□□□ -1.42
SMAD3-209ENST00000558894 POLR3CQ9BUI4 534 aaPredicted RBP6.18□□□□□ -1.42
SMAD3-209ENST00000558894 GPRC5CQ9NQ84 441 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 ENTPD7Q9NQZ7 604 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 PUF60Q9UHX1 559 aaKnown RBP6.18□□□□□ -1.42
SMAD3-209ENST00000558894 LIMCH1Q9UPQ0 1083 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 HES2Q9Y543 173 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 IPPQ9Y573 584 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 CITO14578 2027 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 FSD2A1L4K1 749 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 ARL5CA6NH57 179 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 NRP1O14786 923 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 ZC3H11AO75152 810 aaKnown RBP eCLIP6.17□□□□□ -1.42
SMAD3-209ENST00000558894 BAG4O95429 457 aaKnown RBP6.17□□□□□ -1.42
SMAD3-209ENST00000558894 CXCL14O95715 111 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 POMCP01189 267 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 CENPBP07199 599 aaPredicted RBP6.17□□□□□ -1.42
SMAD3-209ENST00000558894 SKIP12755 728 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 HOXB8P17481 243 aaPredicted RBP6.17□□□□□ -1.42
SMAD3-209ENST00000558894 U2AF2P26368 475 aaKnown RBP eCLIP6.17□□□□□ -1.424e-6■■■□□ 18.9
SMAD3-209ENST00000558894 ALDH7A1P49419 539 aaKnown RBP6.17□□□□□ -1.42
SMAD3-209ENST00000558894 RBM25P49756 843 aaKnown RBP6.17□□□□□ -1.42
SMAD3-209ENST00000558894 FOSBP53539 338 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 ZXDAP98168 799 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 MXD4Q14582 209 aaPredicted RBP6.17□□□□□ -1.42
SMAD3-209ENST00000558894 NBR1Q14596 966 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 PCBP1Q15365 356 aaKnown RBP eCLIP6.17□□□□□ -1.42
SMAD3-209ENST00000558894 KIAA0319Q5VV43 1072 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 CDCA2Q69YH5 1023 aaPredicted RBP6.17□□□□□ -1.42
SMAD3-209ENST00000558894 POTEGQ6S5H5 508 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 GLB1LQ6UWU2 654 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 TRIM67Q6ZTA4 783 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 TMC7Q7Z402 723 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 CDR2LQ86X02 465 aaPredicted RBP6.17□□□□□ -1.42
SMAD3-209ENST00000558894 CCDC83Q8IWF9 413 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 VPS52Q8N1B4 723 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 C12orf76Q8N812 135 aaPredicted RBP6.17□□□□□ -1.42
SMAD3-209ENST00000558894 PGBD4Q96DM1 585 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 RPGRIP1Q96KN7 1286 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 ZFP42Q96MM3 310 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 KLHL5Q96PQ7 755 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 TMEM175Q9BSA9 504 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 APOL5Q9BWW9 433 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 CCDC113Q9H0I3 377 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 CSRNP2Q9H175 543 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 ADAM7Q9H2U9 754 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 FOXP1Q9H334 677 aaPredicted RBP6.17□□□□□ -1.42
SMAD3-209ENST00000558894 FZD8Q9H461 694 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 POMKQ9H5K3 350 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 RSAD1Q9HA92 442 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 TUFT1Q9NNX1 390 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 CHST7Q9NS84 486 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 DBR1Q9UK59 544 aaKnown RBP6.17□□□□□ -1.42
SMAD3-209ENST00000558894 INPP5FQ9Y2H2 1132 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 CNTNAP2Q9UHC6 1331 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 MYH15Q9Y2K3 1946 aa6.17□□□□□ -1.42
SMAD3-209ENST00000558894 ANKRD11Q6UB99 2663 aaPredicted RBP6.16□□□□□ -1.42
SMAD3-209ENST00000558894 C2CD4DB7Z1M9 353 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 MEFVO15553 781 aaPredicted RBP6.16□□□□□ -1.42
SMAD3-209ENST00000558894 CD2BP2O95400 341 aaKnown RBP6.16□□□□□ -1.42
SMAD3-209ENST00000558894 CNPP09543 421 aaKnown RBP6.16□□□□□ -1.42
SMAD3-209ENST00000558894 WEE2P0C1S8 567 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 ITGA4P13612 1032 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 IGFBP6P24592 240 aaPredicted RBP6.16□□□□□ -1.42
SMAD3-209ENST00000558894 RPA1P27694 616 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 AXLP30530 894 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 MCM7P33993 719 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 MLH1P40692 756 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 FXR2P51116 673 aaKnown RBP eCLIP6.16□□□□□ -1.42
SMAD3-209ENST00000558894 CLCN4P51793 760 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 ITIH3Q06033 890 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 ORC2Q13416 577 aaPredicted RBP6.16□□□□□ -1.42
SMAD3-209ENST00000558894 ZNF174Q15697 407 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 PTPN21Q16825 1174 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 FAM187BQ17R55 369 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 IER5LQ5T953 404 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 NOSTRINQ8IVI9 506 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 IGSF22Q8N9C0 903 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 CNNM3Q8NE01 707 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 CASP10Q92851 521 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 CCDC51Q96ER9 411 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 TMEM169Q96HH4 297 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 GAD1Q99259 594 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 PAAF1Q9BRP4 392 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 POLR3FQ9H1D9 316 aaPredicted RBP6.16□□□□□ -1.42
SMAD3-209ENST00000558894 SMOC2Q9H3U7 446 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 NXF3Q9H4D5 531 aaKnown RBP6.16□□□□□ -1.42
SMAD3-209ENST00000558894 RXFP1Q9HBX9 757 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 POLD4Q9HCU8 107 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 BRMS1Q9HCU9 246 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 USP20Q9Y2K6 914 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 HCN4Q9Y3Q4 1203 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 EPG5Q9HCE0 2579 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 COL4A3Q01955 1670 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 CHD6Q8TD26 2715 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 ZMYM2Q9UBW7 1377 aa6.16□□□□□ -1.42
SMAD3-209ENST00000558894 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.15□□□□□ -1.42
SMAD3-209ENST00000558894 TMEM221A6NGB7 291 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms