RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 CTSAP10619 480 aa18.85■□□□□ 0.61
LRRC28-210ENST00000558879 ITGA4P13612 1032 aa18.85■□□□□ 0.61
LRRC28-210ENST00000558879 MRPL43Q8N983 215 aaKnown RBP18.85■□□□□ 0.61
LRRC28-210ENST00000558879 SUSD6Q92537 303 aa18.85■□□□□ 0.61
LRRC28-210ENST00000558879 CCDC113Q9H0I3 377 aa18.85■□□□□ 0.61
LRRC28-210ENST00000558879 NXF3Q9H4D5 531 aaKnown RBP18.85■□□□□ 0.61
LRRC28-210ENST00000558879 UBN1Q9NPG3 1134 aa18.85■□□□□ 0.61
LRRC28-210ENST00000558879 PRMT7Q9NVM4 692 aaPredicted RBP18.85■□□□□ 0.61
LRRC28-210ENST00000558879 KANSL3Q9P2N6 904 aa18.85■□□□□ 0.61
LRRC28-210ENST00000558879 LRWD1Q9UFC0 647 aa18.85■□□□□ 0.61
LRRC28-210ENST00000558879 USP15Q9Y4E8 981 aaPredicted RBP18.85■□□□□ 0.61
LRRC28-210ENST00000558879 HES2Q9Y543 173 aa18.85■□□□□ 0.61
LRRC28-210ENST00000558879 TECTAO75443 2155 aa18.85■□□□□ 0.61
LRRC28-210ENST00000558879 A0A1B0GUA9 196 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 ARHGEF35A5YM69 484 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 SRGAP2BP0DMP2 458 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 CCT6AP40227 531 aaKnown RBP18.84■□□□□ 0.61
LRRC28-210ENST00000558879 MLH1P40692 756 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 NAMPTP43490 491 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 DSC1Q08554 894 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 IL17AQ16552 155 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 RILPL1Q5EBL4 403 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 ANKRD54Q6NXT1 300 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 SLC27A1Q6PCB7 646 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 SYCE2Q6PIF2 218 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 MAEAQ7L5Y9 396 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 VPS52Q8N1B4 723 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 SNX29Q8TEQ0 813 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 RAB34Q9BZG1 259 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 GBP3Q9H0R5 595 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 RNF39Q9H2S5 420 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 FZD8Q9H461 694 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 HCFC2Q9Y5Z7 792 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 STK24Q9Y6E0 443 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 ZNF318Q5VUA4 2279 aa18.84■□□□□ 0.61
LRRC28-210ENST00000558879 MYO10Q9HD67 2058 aa18.83■□□□□ 0.61
LRRC28-210ENST00000558879 ARL5CA6NH57 179 aa18.83■□□□□ 0.6
LRRC28-210ENST00000558879 GPR37L1O60883 481 aa18.83■□□□□ 0.6
LRRC28-210ENST00000558879 POMCP01189 267 aa18.83■□□□□ 0.6
LRRC28-210ENST00000558879 COL9A1P20849 921 aa18.83■□□□□ 0.6
LRRC28-210ENST00000558879 ATP2C1P98194 919 aaPredicted RBP18.83■□□□□ 0.6
LRRC28-210ENST00000558879 NCBP1Q09161 790 aaKnown RBP18.83■□□□□ 0.6
LRRC28-210ENST00000558879 ZBTB8OSQ8IWT0 167 aa18.83■□□□□ 0.6
LRRC28-210ENST00000558879 COLGALT2Q8IYK4 626 aa18.83■□□□□ 0.6
LRRC28-210ENST00000558879 RNF168Q8IYW5 571 aaPredicted RBP18.83■□□□□ 0.6
LRRC28-210ENST00000558879 C2orf40Q9H1Z8 148 aa18.83■□□□□ 0.6
LRRC28-210ENST00000558879 S1PR5Q9H228 398 aa18.83■□□□□ 0.6
LRRC28-210ENST00000558879 BHMT2Q9H2M3 363 aa18.83■□□□□ 0.6
LRRC28-210ENST00000558879 DDX19AQ9NUU7 478 aaKnown RBP18.83■□□□□ 0.6
LRRC28-210ENST00000558879 MARCH5Q9NX47 278 aa18.83■□□□□ 0.6
LRRC28-210ENST00000558879 GIT1Q9Y2X7 761 aa18.83■□□□□ 0.6
LRRC28-210ENST00000558879 KMT2EQ8IZD2 1858 aa18.82■□□□□ 0.6
LRRC28-210ENST00000558879 LOC730098B7Z3J9 87 aa18.82■□□□□ 0.6
LRRC28-210ENST00000558879 CLASP2O75122 1294 aaKnown RBP18.82■□□□□ 0.6
LRRC28-210ENST00000558879 EFEMP2O95967 443 aa18.82■□□□□ 0.6
LRRC28-210ENST00000558879 EDN1P05305 212 aa18.82■□□□□ 0.6
LRRC28-210ENST00000558879 GIT2Q14161 759 aa18.82■□□□□ 0.6
LRRC28-210ENST00000558879 CBX2Q14781 532 aaPredicted RBP18.82■□□□□ 0.6
LRRC28-210ENST00000558879 CDR2LQ86X02 465 aaPredicted RBP18.82■□□□□ 0.6
LRRC28-210ENST00000558879 GSTCDQ8NEC7 633 aa18.82■□□□□ 0.6
LRRC28-210ENST00000558879 CASP10Q92851 521 aa18.82■□□□□ 0.6
LRRC28-210ENST00000558879 ZFP42Q96MM3 310 aa18.82■□□□□ 0.6
LRRC28-210ENST00000558879 GAD1Q99259 594 aa18.82■□□□□ 0.6
LRRC28-210ENST00000558879 LRFN3Q9BTN0 628 aa18.82■□□□□ 0.6
LRRC28-210ENST00000558879 MMTAG2Q9BU76 263 aaKnown RBP18.82■□□□□ 0.6
LRRC28-210ENST00000558879 TRIM6Q9C030 488 aaPredicted RBP18.82■□□□□ 0.6
LRRC28-210ENST00000558879 MIOSQ9NXC5 875 aa18.82■□□□□ 0.6
LRRC28-210ENST00000558879 STK39Q9UEW8 545 aa18.82■□□□□ 0.6
LRRC28-210ENST00000558879 KIAA1024Q9UPX6 916 aa18.82■□□□□ 0.6
LRRC28-210ENST00000558879 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.81■□□□□ 0.6
LRRC28-210ENST00000558879 TTLL13PA6NNM8 815 aa18.81■□□□□ 0.6
LRRC28-210ENST00000558879 PP2D1A8MPX8 630 aa18.81■□□□□ 0.6
LRRC28-210ENST00000558879 NRP1O14786 923 aa18.81■□□□□ 0.6
LRRC28-210ENST00000558879 DCXO43602 365 aa18.81■□□□□ 0.6
LRRC28-210ENST00000558879 NPTXRO95502 500 aa18.81■□□□□ 0.6
LRRC28-210ENST00000558879 HOXB8P17481 243 aaPredicted RBP18.81■□□□□ 0.6
LRRC28-210ENST00000558879 SCNN1GP51170 649 aa18.81■□□□□ 0.6
LRRC28-210ENST00000558879 PPP2R5AQ15172 486 aa18.81■□□□□ 0.6
LRRC28-210ENST00000558879 PTPN14Q15678 1187 aa18.81■□□□□ 0.6
LRRC28-210ENST00000558879 MCTP1Q6DN14 999 aa18.81■□□□□ 0.6
LRRC28-210ENST00000558879 LLGL2Q6P1M3 1020 aa18.81■□□□□ 0.6
LRRC28-210ENST00000558879 HACE1Q8IYU2 909 aa18.81■□□□□ 0.6
LRRC28-210ENST00000558879 AUTS2Q8WXX7 1259 aa18.81■□□□□ 0.6
LRRC28-210ENST00000558879 FAM193BQ96PV7 902 aaPredicted RBP18.81■□□□□ 0.6
LRRC28-210ENST00000558879 PDZD7Q9H5P4 517 aa18.81■□□□□ 0.6
LRRC28-210ENST00000558879 DOCK8Q8NF50 2099 aa18.81■□□□□ 0.6
LRRC28-210ENST00000558879 CXCL14O95715 111 aa18.8■□□□□ 0.6
LRRC28-210ENST00000558879 PRKCBP05771 671 aa18.8■□□□□ 0.6
LRRC28-210ENST00000558879 ALADP13716 330 aa18.8■□□□□ 0.6
LRRC28-210ENST00000558879 BMS1Q14692 1282 aaKnown RBP18.8■□□□□ 0.6
LRRC28-210ENST00000558879 MAPK6Q16659 721 aa18.8■□□□□ 0.6
LRRC28-210ENST00000558879 TMEM31Q5JXX7 168 aa18.8■□□□□ 0.6
LRRC28-210ENST00000558879 HYIQ5T013 277 aa18.8■□□□□ 0.6
LRRC28-210ENST00000558879 KCNK18Q7Z418 384 aa18.8■□□□□ 0.6
LRRC28-210ENST00000558879 KIFAP3Q92845 792 aa18.8■□□□□ 0.6
LRRC28-210ENST00000558879 HERC2P3Q9BVR0 1158 aa18.8■□□□□ 0.6
LRRC28-210ENST00000558879 APOL6Q9BWW8 343 aa18.8■□□□□ 0.6
LRRC28-210ENST00000558879 PHF7Q9BWX1 381 aaPredicted RBP18.8■□□□□ 0.6
LRRC28-210ENST00000558879 SMC3Q9UQE7 1217 aa18.8■□□□□ 0.6
LRRC28-210ENST00000558879 FAN1Q9Y2M0 1017 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms